Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_011029 Daucus carota HOM05D001938 ORTHO05D001965 1.3e-88 329.7 171 100.0
DCAR_009182 Daucus carota HOM05D001938 ORTHO05D001965 4.8e-83 311.2 170 94.7
DCAR_019052 Daucus carota HOM05D001938 ORTHO05D001965 6.3e-83 310.8 170 94.1
DCAR_002113 Daucus carota HOM05D001938 ORTHO05D001965 1.1e-79 300.1 170 91.8
CSS0003859 Camellia sinensis var. sinensis HOM05D001938 ORTHO05D001965 1.4e-45 186.8 177 62.1
DCAR_000878 Daucus carota HOM05D001938 ORTHO05D001965 1.2e-44 183.7 144 72.9
Dinv36170 Davidia involucrata HOM05D001938 ORTHO05D001965 2.4e-42 176.0 177 60.5
Actinidia16381 Actinidia chinensis HOM05D001938 ORTHO05D001965 4.3e-39 165.2 178 59.6
Rhsim13G0210500 Rhododendron simsii HOM05D001938 ORTHO05D001965 6.9e-37 157.9 177 54.8
Cfa009850 Carpinus fangiana HOM05D001938 ORTHO05D001965 4.2e-34 148.7 178 55.6
CiPaw.13G151200 Carya illinoinensis HOM05D001938 ORTHO05D001965 4.2e-34 148.7 179 53.6
QL01p017218 Quercus lobata HOM05D001938 ORTHO05D001965 2.1e-33 146.4 177 54.2
Thecc.09G249000 Theobroma cacao HOM05D001938 ORTHO05D001965 6.0e-33 144.8 178 55.6
Duzib170G0184 Durio zibethinus HOM05D001938 ORTHO05D001965 1.7e-32 143.3 179 53.1
Hma1.2p1_0129F.1_g060180 Hydrangea macrophylla HOM05D001938 ORTHO05D001965 5.1e-32 141.7 172 54.1
CANSAT54G1670 Cannabis sativa HOM05D001938 ORTHO05D001965 1.3e-30 137.1 188 48.9
Haze_23227 Corylus avellana HOM05D001938 ORTHO05D001965 2.1e-30 136.3 178 52.2
Prupe.4G267000 Prunus persica HOM05D001938 ORTHO05D001965 6.2e-30 134.8 182 51.6
PSO339G5094 Papaver somniferum HOM05D001938 ORTHO05D001965 1.1e-29 134.0 171 49.7
TAR633G0245 Trochodendron aralioides HOM05D001938 ORTHO05D001965 1.4e-29 133.7 176 48.9
Manes.01G179000 Manihot esculenta HOM05D001938 ORTHO05D001965 1.8e-29 133.3 171 51.5
TAR636G3555 Trochodendron aralioides HOM05D001938 ORTHO05D001965 3.1e-29 132.5 175 50.9
TAR623G1209 Trochodendron aralioides HOM05D001938 ORTHO05D001965 6.9e-29 131.3 176 47.7
TAR623G1257 Trochodendron aralioides HOM05D001938 ORTHO05D001965 6.9e-29 131.3 176 47.7
MD03G1166500 Malus domestica HOM05D001938 ORTHO05D001965 1.5e-28 130.2 179 49.7
PSO384G1345 Papaver somniferum HOM05D001938 ORTHO05D001965 1.5e-28 130.2 171 49.1
VMungo0647G0245 Vigna mungo HOM05D001938 ORTHO05D001965 2.0e-28 129.8 183 49.7
Phvul.008G200800 Phaseolus vulgaris HOM05D001938 ORTHO05D001965 2.6e-28 129.4 180 51.7
Duzib168G0074 Durio zibethinus HOM05D001938 ORTHO05D001965 3.4e-28 129.0 176 52.3
Gohir.D05G074100 Gossypium hirsutum HOM05D001938 ORTHO05D001965 3.4e-28 129.0 173 53.2
Gohir.A05G071200 Gossypium hirsutum HOM05D001938 ORTHO05D001965 4.5e-28 128.6 173 52.6
Gorai.009G075200 Gossypium raimondii HOM05D001938 ORTHO05D001965 5.8e-28 128.3 150 57.3
Sed0003704 Sechium edule HOM05D001938 ORTHO05D001965 7.6e-28 127.9 182 48.9
Glyma.14G034900 Glycine max HOM05D001938 ORTHO05D001965 9.9e-28 127.5 184 50.0
Potri.001G275800 Populus trichocarpa HOM05D001938 ORTHO05D001965 2.9e-27 125.9 177 49.7
Atru.chr3.2756 Acer truncatum HOM05D001938 ORTHO05D001965 6.4e-27 124.8 181 48.6
Manes.02G139700 Manihot esculenta HOM05D001938 ORTHO05D001965 1.9e-26 123.2 172 49.4
Nn2g14820 Nelumbo nucifera HOM05D001938 ORTHO05D001965 1.9e-26 123.2 178 46.1
ClCG03G012600 Citrullus lanatus HOM05D001938 ORTHO05D001965 7.1e-26 121.3 183 49.7
Lj6g0006256 Lotus japonicus HOM05D001938 ORTHO05D001965 9.3e-26 120.9 179 50.3
CsaV3_1G043380 Cucumis sativus L. HOM05D001938 ORTHO05D001965 1.2e-25 120.6 183 49.2
Psat5g181200 Pisum sativum HOM05D001938 ORTHO05D001965 1.6e-25 120.2 178 46.6
Actinidia06962 Actinidia chinensis HOM05D001938 ORTHO05D001965 4.6e-25 118.6 102 67.6
Oeu001495.1 Olea europaea HOM05D001938 ORTHO05D001965 4.6e-25 118.6 175 46.9
Glyma.07G230700 Glycine max HOM05D001938 ORTHO05D001965 1.3e-24 117.1 178 48.3
MBI13_g27801_MAGBIO Magnolia biondii HOM05D001938 ORTHO05D001965 1.8e-24 116.7 176 46.6
Aqoxy1G00363 Aquilegia oxysepala HOM05D001938 ORTHO05D001965 6.7e-24 114.8 176 44.9
Sabra16G0170100 Salix brachista HOM05D001938 ORTHO05D001965 1.9e-23 113.2 178 48.3
Eucgr.B03732 Eucalyptus grandis HOM05D001938 ORTHO05D001965 7.4e-23 111.3 201 42.8
Lalb_Chr10g0106281 Lupinus albus HOM05D001938 ORTHO05D001965 7.4e-23 111.3 177 45.8
TPR.G19345 Trifolium pratense HOM05D001938 ORTHO05D001965 9.6e-23 110.9 181 45.3
TPR.G8481 Trifolium pratense HOM05D001938 ORTHO05D001965 1.3e-22 110.5 174 46.0
VMungo0540G2077 Vigna mungo HOM05D001938 ORTHO05D001965 1.3e-22 110.5 178 46.6
Glyma.20G037600 Glycine max HOM05D001938 ORTHO05D001965 3.7e-22 109.0 179 44.7
Glyma.02G279900 Glycine max HOM05D001938 ORTHO05D001965 8.1e-22 107.8 185 47.0
Medtr5g089720 Medicago truncatula HOM05D001938 ORTHO05D001965 1.4e-21 107.1 177 46.3
Nn7g36699 Nelumbo nucifera HOM05D001938 ORTHO05D001965 3.1e-21 105.9 176 42.6
Nn7g36700 Nelumbo nucifera HOM05D001938 ORTHO05D001965 3.1e-21 105.9 176 42.6
Nn7g36701 Nelumbo nucifera HOM05D001938 ORTHO05D001965 3.1e-21 105.9 176 42.6
MELO3C015121.2 Cucumis melo HOM05D001938 ORTHO05D001965 4.0e-21 105.5 183 45.9
Lalb_Chr17g0347941 Lupinus albus HOM05D001938 ORTHO05D001965 6.9e-21 104.8 176 48.3
Ca_03984_v3 Cicer arietinum L. HOM05D001938 ORTHO05D001965 2.0e-20 103.2 176 46.6
Phvul.006G030900 Phaseolus vulgaris HOM05D001938 ORTHO05D001965 2.0e-20 103.2 178 44.9
FAN21G1149 Fragaria x ananassa HOM05D001938 ORTHO05D001965 1.0e-19 100.9 181 46.4
FAN16G2012 Fragaria x ananassa HOM05D001938 ORTHO05D001965 1.7e-19 100.1 184 45.1
MSTRG.18459 Avicennia marina HOM05D001938 ORTHO05D001965 2.9e-19 99.4 174 45.4
Potri.009G070400 Populus trichocarpa HOM05D001938 ORTHO05D001965 6.5e-19 98.2 177 44.1
PGR102G3051 Punica granatum HOM05D001938 ORTHO05D001965 1.4e-18 97.1 187 44.4
FAN25G2764 Fragaria x ananassa HOM05D001938 ORTHO05D001965 2.5e-18 96.3 184 45.1
FvH4_3g27890 Fragaria vesca HOM05D001938 ORTHO05D001965 5.5e-18 95.1 183 44.3
Sabra09G0053300 Salix brachista HOM05D001938 ORTHO05D001965 1.6e-17 93.6 177 44.6
ECA238G2276 Erigeron canadensis HOM05D001938 ORTHO05D001965 2.7e-17 92.8 107 52.3
Ciclev10015355m.g Citrus clementina HOM05D001938 ORTHO05D001965 1.3e-16 90.5 194 41.8
Lj1C284G6 Lonicera japonica HOM05D001938 ORTHO05D001965 8.7e-16 87.8 111 54.1
Lsat_1_v5_gn_2_32040 Lactuca sativa HOM05D001938 ORTHO05D001965 2.4e-13 79.7 122 49.2
RcHm_v2.0_Chr5g0050621 Rosa chinensis HOM05D001938 ORTHO05D001965 3.1e-13 79.3 182 40.1
FAN11G3277 Fragaria x ananassa HOM05D001938 ORTHO05D001965 6.9e-13 78.2 183 40.4
Psat0s133g0040 Pisum sativum HOM05D001938 ORTHO05D001965 6.9e-13 78.2 175 37.1
HanXRQChr14g0432241 Helianthus annuus HOM05D001938 ORTHO05D001965 5.8e-12 75.1 184 37.5
SGA_v2.0_scaffold8G04547 Striga asiatica HOM05D001938 ORTHO05D001965 1.4e-10 70.5 170 37.1
GSVIVG01037270001 Vitis vinifera HOM05D001938 ORTHO05D001965 4.2e-10 68.9 125 44.8
ATR0745G036 Amborella trichopoda HOM05D001938 ORTHO05D001965 2.7e-09 66.2 167 37.7
PGSC0003DMG400009452 Solanum tuberosum HOM05D001938 ORTHO05D001965 6.1e-09 65.1 182 35.7
Migut.D00658 Erythranthe guttata HOM05D001938 ORTHO05D001965 2.3e-08 63.2 105 45.7
COL.COLO4_35672 Corchorus olitorius HOM05D001938 ORTHO05D001965 3.0e-08 62.8 189 36.5
Peaxi162Scf00004g00455 Petunia axillaris HOM05D001938 ORTHO05D001965 3.0e-08 62.8 177 36.7
AUR62000188 Chenopodium quinoa HOM05D001938 ORTHO05D001965 8.7e-08 61.2 172 34.3
Hund21983 Selenicereus undatus HOM05D004084 ORTHO05D004662 4.3e-07 58.9 136 37.5
AUR62006538 Chenopodium quinoa HOM05D001938 ORTHO05D001965 5.7e-07 58.5 171 35.1
Nitab4.5_0001500g0060 Nicotiana tabacum HOM05D001938 ORTHO05D004662 1.6e-06 57.0 188 34.0
Nitab4.5_0000730g0060 Nicotiana tabacum HOM05D001938 ORTHO05D004662 3.7e-06 55.8 190 34.2
CAN.G96.13 Capsicum annuum HOM05D001938 ORTHO05D001965 6.3e-06 55.1 193 35.8


User provided reference genes

Program Settings