Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_010961 Daucus carota HOM05D003671 ORTHO05D004285 0.0e+00 1689.1 859 100.0
DCAR_021427 Daucus carota HOM05D003671 ORTHO05D004285 1.8e-263 912.9 833 64.1
Dinv25318 Davidia involucrata HOM05D003671 ORTHO05D004285 2.6e-249 865.9 845 59.5
CSS0036424 Camellia sinensis var. sinensis HOM05D003671 ORTHO05D004285 2.5e-244 849.4 847 58.3
Cc06_g00530 Coffea canephora HOM05D003671 ORTHO05D004285 2.1e-243 846.3 845 57.3
CSS0037141 Camellia sinensis var. sinensis HOM05D003671 ORTHO05D004285 3.6e-243 845.5 847 58.1
Actinidia29047 Actinidia chinensis HOM05D003671 ORTHO05D004285 9.5e-236 820.8 845 56.0
Actinidia11522 Actinidia chinensis HOM05D003671 ORTHO05D004285 2.8e-235 819.3 848 56.6
CSS0025205 Camellia sinensis var. sinensis HOM05D003671 ORTHO05D004285 6.8e-234 814.7 836 56.6
CSS0031435 Camellia sinensis var. sinensis HOM05D003671 ORTHO05D004285 8.9e-234 814.3 836 56.6
Rhsim05G0229100 Rhododendron simsii HOM05D003671 ORTHO05D004285 2.0e-230 803.1 855 54.3
vmacro20357 Vaccinium macrocarpon HOM05D003671 ORTHO05D004285 5.9e-230 801.6 861 54.7
Thecc.04G154700 Theobroma cacao HOM05D003671 ORTHO05D004285 8.6e-229 797.7 846 56.4
Hma1.2p1_1052F.1_g252340 Hydrangea macrophylla HOM05D003671 ORTHO05D004285 1.9e-228 796.6 845 55.3
Lj3C942T7 Lonicera japonica HOM05D003671 ORTHO05D004285 2.1e-227 793.1 837 56.4
Manes.09G116100 Manihot esculenta HOM05D003671 ORTHO05D004285 1.9e-223 780.0 868 52.8
Manes.09G115800 Manihot esculenta HOM05D003671 ORTHO05D004285 3.2e-223 779.2 844 54.3
MSTRG.18954 Avicennia marina HOM05D003671 ORTHO05D004285 4.1e-223 778.9 823 55.0
Dinv11386 Davidia involucrata HOM05D003671 ORTHO05D004285 6.0e-222 775.0 760 59.5
Migut.J00060 Erythranthe guttata HOM05D003671 ORTHO05D004285 4.0e-218 762.3 825 54.3
FAN05G3119 Fragaria x ananassa HOM05D003671 ORTHO05D004285 1.2e-217 760.8 844 53.7
Prupe.6G290600 Prunus persica HOM05D003671 ORTHO05D004285 1.5e-217 760.4 842 52.1
FAN05G5788 Fragaria x ananassa HOM05D003671 ORTHO05D004285 2.6e-217 759.6 844 53.6
Duzib212G0018 Durio zibethinus HOM05D003671 ORTHO05D004285 3.4e-217 759.2 845 54.9
Rhsim04G0122600 Rhododendron simsii HOM05D003671 ORTHO05D004285 3.7e-216 755.7 838 53.8
Ciclev10011037m.g Citrus clementina HOM05D003671 ORTHO05D004285 8.3e-216 754.6 845 54.8
Duzib151G0206 Durio zibethinus HOM05D003671 ORTHO05D004285 1.0e-213 747.7 845 54.0
SGA_v2.0_scaffold85G26648 Striga asiatica HOM05D003671 ORTHO05D004285 9.5e-212 741.1 844 54.5
Atru.chr8.2376 Acer truncatum HOM05D003671 ORTHO05D004285 1.2e-211 740.7 837 53.6
MSTRG.5514 Avicennia marina HOM05D003671 ORTHO05D004285 4.7e-211 738.8 840 52.5
RcHm_v2.0_Chr3g0460911 Rosa chinensis HOM05D003671 ORTHO05D004285 1.4e-210 737.3 844 52.3
COL.COLO4_30007 Corchorus olitorius HOM05D003671 ORTHO05D004285 4.0e-210 735.7 846 53.5
Peaxi162Scf00595g00423 Petunia axillaris HOM05D003671 ORTHO05D004285 6.8e-210 734.9 839 52.7
FvH4_6g10170 Fragaria vesca HOM05D003671 ORTHO05D004285 1.2e-209 734.2 838 52.3
Gorai.005G122800 Gossypium raimondii HOM05D003671 ORTHO05D004285 7.5e-209 731.5 845 54.6
Potri.006G107500 Populus trichocarpa HOM05D003671 ORTHO05D004285 2.9e-208 729.6 836 52.6
FAN14G5445 Fragaria x ananassa HOM05D003671 ORTHO05D004285 3.7e-208 729.2 838 52.0
CiPaw.10G164200 Carya illinoinensis HOM05D003671 ORTHO05D004285 4.9e-208 728.8 843 52.2
PGR004G1797 Punica granatum HOM05D003671 ORTHO05D004285 1.4e-207 727.2 843 51.4
Cfa017060 Carpinus fangiana HOM05D003671 ORTHO05D004285 2.1e-206 723.4 842 53.2
Cpa.g.sc86.30 Carica papaya HOM05D003671 ORTHO05D004285 1.7e-205 720.3 803 53.4
TAR633G2716 Trochodendron aralioides HOM05D003671 ORTHO05D004285 3.0e-205 719.5 852 51.6
TAR636G0316 Trochodendron aralioides HOM05D003671 ORTHO05D004285 1.5e-204 717.2 854 51.9
TAR636G3051 Trochodendron aralioides HOM05D003671 ORTHO05D004285 2.5e-204 716.5 854 51.8
QL07p032733 Quercus lobata HOM05D003671 ORTHO05D004285 2.4e-202 709.9 844 51.5
CAN.G604.1 Capsicum annuum HOM05D003671 ORTHO05D004285 5.8e-201 705.3 840 51.4
SGA_v2.0_scaffold373G50172 Striga asiatica HOM05D003671 ORTHO05D004285 8.4e-200 701.4 840 52.9
Nitab4.5_0007794g0010 Nicotiana tabacum HOM05D003671 ORTHO05D004285 1.1e-199 701.0 829 51.5
Oeu026963.1 Olea europaea HOM05D003671 ORTHO05D004285 1.9e-199 700.3 839 51.3
Lj1g0018847 Lotus japonicus HOM05D003671 ORTHO05D004285 5.4e-199 698.7 849 50.2
CANSAT35G0504 Cannabis sativa HOM05D003671 ORTHO05D004285 9.3e-199 698.0 844 51.4
Nitab4.5_0002204g0070 Nicotiana tabacum HOM05D003671 ORTHO05D004285 9.3e-199 698.0 837 50.7
MD12G1185300 Malus domestica HOM05D003671 ORTHO05D004285 3.3e-196 689.5 844 50.1
Sabra06G0083600 Salix brachista HOM05D003671 ORTHO05D004285 5.6e-196 688.7 839 50.8
TWI74G1343 Tripterygium wilfordii HOM05D003671 ORTHO05D004285 5.3e-194 682.2 846 50.0
Glyma.18G211200 Glycine max HOM05D003671 ORTHO05D004285 9.0e-194 681.4 845 49.3
TWI77G0322 Tripterygium wilfordii HOM05D003671 ORTHO05D004285 1.2e-193 681.0 841 49.6
Potri.016G133700 Populus trichocarpa HOM05D003671 ORTHO05D004285 2.2e-192 676.8 844 49.9
ClCG10G022620 Citrullus lanatus HOM05D003671 ORTHO05D004285 2.9e-192 676.4 861 49.8
Glyma.18G212400 Glycine max HOM05D003671 ORTHO05D004285 3.8e-192 676.0 847 49.4
Glyma.09G277700 Glycine max HOM05D003671 ORTHO05D004285 6.4e-192 675.2 845 49.0
Lalb_Chr19g0124051 Lupinus albus HOM05D003671 ORTHO05D004285 1.1e-191 674.5 837 48.7
arahy.Tifrunner.gnm1.ann1.8XV151 Arachis hypogaea HOM05D003671 ORTHO05D004285 2.4e-191 673.3 858 49.0
arahy.Tifrunner.gnm1.ann1.616PIC Arachis hypogaea HOM05D003671 ORTHO05D004285 7.1e-191 671.8 861 49.1
FAN02G1273 Fragaria x ananassa HOM05D003671 ORTHO05D004285 7.1e-191 671.8 837 49.1
Sabra04G0151200 Salix brachista HOM05D003671 ORTHO05D004285 1.2e-190 671.0 838 49.6
FAN09G2383 Fragaria x ananassa HOM05D003671 ORTHO05D004285 2.1e-190 670.2 836 48.9
CsaV3_3G033210 Cucumis sativus L. HOM05D003671 ORTHO05D004285 7.8e-190 668.3 860 49.2
MELO3C009114.2 Cucumis melo HOM05D003671 ORTHO05D004285 3.9e-189 666.0 860 48.8
Ca_07750_v3 Cicer arietinum L. HOM05D003671 ORTHO05D004285 5.1e-189 665.6 848 49.9
Lalb_Chr03g0043701 Lupinus albus HOM05D003671 ORTHO05D004285 3.3e-188 662.9 844 48.2
Sed0011007 Sechium edule HOM05D003671 ORTHO05D004285 3.3e-188 662.9 861 48.2
Glyma.09G277602 Glycine max HOM05D003671 ORTHO05D004285 7.3e-188 661.8 845 48.3
Haze_21142 Corylus avellana HOM05D003671 ORTHO05D004285 1.3e-187 661.0 795 51.4
Lalb_Chr01g0023661 Lupinus albus HOM05D003671 ORTHO05D004285 1.3e-187 661.0 847 48.1
VMungo1383G1272 Vigna mungo HOM05D003671 ORTHO05D004285 1.3e-187 661.0 839 49.0
ECA247G1347 Erigeron canadensis HOM05D003671 ORTHO05D004285 2.8e-187 659.8 842 49.8
Eucgr.K01274 Eucalyptus grandis HOM05D003671 ORTHO05D004285 2.8e-187 659.8 843 48.5
Haze_21147 Corylus avellana HOM05D003671 ORTHO05D004285 4.8e-187 659.1 795 51.3
CAN.G15.24 Capsicum annuum HOM05D003671 ORTHO05D004285 1.1e-186 657.9 832 49.6
Medtr7g072590 Medicago truncatula HOM05D003671 ORTHO05D004285 1.8e-186 657.1 849 49.0
PGSC0003DMG400013061 Solanum tuberosum HOM05D003671 ORTHO05D004285 6.9e-186 655.2 831 49.2
Ca_07746_v3 Cicer arietinum L. HOM05D003671 ORTHO05D004285 3.4e-185 652.9 846 49.4
TWI53G1222 Tripterygium wilfordii HOM05D003671 ORTHO05D004285 2.2e-184 650.2 834 48.1
Psat0s1450g0040 Pisum sativum HOM05D003671 ORTHO05D004285 6.4e-184 648.7 852 48.9
vmacro08928 Vaccinium macrocarpon HOM05D003671 ORTHO05D004285 6.4e-184 648.7 830 48.4
Oeu060440.1 Olea europaea HOM05D003671 ORTHO05D004285 1.1e-183 647.9 836 48.7
Gohir.A03G087500 Gossypium hirsutum HOM05D003671 ORTHO05D004285 9.3e-183 644.8 845 50.2
Gohir.D02G108300 Gossypium hirsutum HOM05D003671 ORTHO05D004285 1.6e-182 644.0 844 50.2
Gohir.A03G088100 Gossypium hirsutum HOM05D003671 ORTHO05D004285 7.9e-182 641.7 845 50.2
Gorai.005G122900 Gossypium raimondii HOM05D003671 ORTHO05D004285 7.9e-182 641.7 844 50.1
Phvul.008G084500 Phaseolus vulgaris HOM05D003671 ORTHO05D004285 7.9e-182 641.7 844 47.9
Solyc09g018310.4 Solanum lycopersicum HOM05D003671 ORTHO05D004285 1.0e-181 641.3 831 49.3
Sopen09g011320 Solanum pennellii HOM05D003671 ORTHO05D004285 1.8e-181 640.6 831 49.2
MD04G1172000 Malus domestica HOM05D003671 ORTHO05D004285 5.1e-181 639.0 836 47.5
Phvul.008G084400 Phaseolus vulgaris HOM05D003671 ORTHO05D004285 1.1e-180 637.9 841 47.7
Nitab4.5_0002348g0020 Nicotiana tabacum HOM05D003671 ORTHO05D004285 2.5e-180 636.7 840 49.0
Nitab4.5_0000126g0070 Nicotiana tabacum HOM05D003671 ORTHO05D004285 9.0e-178 628.2 840 48.5
Medtr7g072520 Medicago truncatula HOM05D003671 ORTHO05D004285 2.6e-177 626.7 841 47.6
Nn2g10354 Nelumbo nucifera HOM05D003671 ORTHO05D004285 5.8e-177 625.5 857 47.3
TPR.G4424 Trifolium pratense HOM05D003671 ORTHO05D004285 8.4e-176 621.7 851 47.0
THA.LOC104806637 Tarenaya hassleriana HOM05D003671 ORTHO05D004285 4.6e-174 615.9 848 46.7
MBI15_g31431_MAGBIO Magnolia biondii HOM05D003671 ORTHO05D004285 2.3e-173 613.6 855 46.0
Lj1g0001828 Lotus japonicus HOM05D003671 ORTHO05D004285 1.1e-172 611.3 843 47.3
Lalb_Chr07g0190641 Lupinus albus HOM05D003671 ORTHO05D004285 1.6e-171 607.4 796 49.1
CiPaw.09G218900 Carya illinoinensis HOM05D003671 ORTHO05D004285 2.3e-165 587.0 786 48.1
Sp4g20820 Schrenkiella parvula HOM05D003671 ORTHO05D004285 1.5e-164 584.3 837 45.9
AT3G51650 Arabidopsis thaliana HOM05D003671 ORTHO05D004285 1.8e-162 577.4 839 45.5
Carub.0004s2047 Capsella rubella HOM05D003671 ORTHO05D004285 6.9e-162 575.5 832 45.9
AL5G32090 Arabidopsis lyrata HOM05D003671 ORTHO05D004285 1.2e-161 574.7 836 45.7
Ah.08g209720 Amaranthus hybridus HOM05D003671 ORTHO05D004285 3.4e-161 573.2 837 47.2
AT3G51640 Arabidopsis thaliana HOM05D003671 ORTHO05D004285 1.7e-160 570.9 838 45.2
AL4G35770 Arabidopsis lyrata HOM05D003671 ORTHO05D004285 3.8e-160 569.7 832 45.4
EL10Ac7g17060 Beta vulgaris HOM05D003671 ORTHO05D004285 1.4e-157 561.2 835 45.3
Oeu060446.2 Olea europaea HOM05D003671 ORTHO05D004285 1.4e-157 561.2 914 42.9
Thhalv10016251m.g Eutrema salsugineum HOM05D003671 ORTHO05D004285 1.8e-157 560.8 840 44.4
Hund03740 Selenicereus undatus HOM05D003671 ORTHO05D004285 1.5e-156 557.8 845 44.6
Psat3g120920 Pisum sativum HOM05D003671 ORTHO05D004285 1.3e-155 554.7 831 45.1
Aa31LG5G23820 Aethionema arabicum HOM05D003671 ORTHO05D004285 4.8e-155 552.7 839 43.5
AUR62029686 Chenopodium quinoa HOM05D003671 ORTHO05D004285 5.3e-154 549.3 839 44.9
BcaB01g00433 Brassica carinata HOM05D003671 ORTHO05D004285 1.2e-153 548.1 832 44.7
Gohir.D02G108200 Gossypium hirsutum HOM05D003671 ORTHO05D004285 4.2e-151 539.7 743 49.1
CARHR133180 Cardamine hirsuta HOM05D003671 ORTHO05D004285 2.6e-148 530.4 832 43.6
Sc07g0005760 Simmondsia chinensis HOM05D003671 ORTHO05D004285 3.7e-147 526.6 848 44.1
BolC8t50300H Brassica oleracea HOM05D003671 ORTHO05D004285 1.4e-146 524.6 840 43.2
unitig_699.g19370 Utricularia gibba HOM05D003671 ORTHO05D004285 1.4e-146 524.6 819 43.2
CARHR161250 Cardamine hirsuta HOM05D003671 ORTHO05D004285 5.3e-146 522.7 751 47.0
A09p44780 Brassica napus HOM05D003671 ORTHO05D004285 1.2e-145 521.5 832 43.3
BcaB01g00434 Brassica carinata HOM05D003671 ORTHO05D004285 2.6e-145 520.4 833 43.2
BcaB01g00498 Brassica carinata HOM05D003671 ORTHO05D004285 5.9e-145 519.2 839 43.0
C08p26840 Brassica napus HOM05D003671 ORTHO05D004285 2.2e-144 517.3 839 42.9
C08p26830 Brassica napus HOM05D003671 ORTHO05D004285 1.9e-143 514.2 828 43.2
BraA09t39938Z Brassica rapa HOM05D003671 ORTHO05D004285 7.2e-143 512.3 832 42.8
Aqoxy2G00724 Aquilegia oxysepala HOM05D003671 ORTHO05D004285 3.6e-142 510.0 853 42.2
BolC8t50298H Brassica oleracea HOM05D003671 ORTHO05D004285 7.4e-140 502.3 852 41.9
PSO339G1890 Papaver somniferum HOM05D003671 ORTHO05D004285 3.6e-134 483.4 845 41.2
A09p44750 Brassica napus HOM05D003671 ORTHO05D004285 3.0e-133 480.3 859 41.9
PSO384G1707 Papaver somniferum HOM05D003671 ORTHO05D004285 3.0e-133 480.3 852 41.0
BraA09t39936Z Brassica rapa HOM05D003671 ORTHO05D004285 1.3e-131 474.9 862 41.6
GSVIVG01030211001 Vitis vinifera HOM05D003671 ORTHO05D004285 1.4e-130 471.5 692 44.8
AUR62006358 Chenopodium quinoa HOM05D003671 ORTHO05D004285 1.1e-127 461.8 795 41.8
MBI03_g38977_MAGBIO Magnolia biondii HOM05D003671 ORTHO05D004285 7.2e-127 459.1 794 41.3
Lsat_1_v5_gn_8_119680 Lactuca sativa HOM05D003671 ORTHO05D004285 1.7e-120 438.0 723 44.4
Psat3g121000 Pisum sativum HOM05D003671 ORTHO05D004285 3.3e-119 433.7 722 42.1
PSO541G0005 Papaver somniferum HOM05D003671 ORTHO05D004285 1.7e-115 421.4 793 40.4
Peaxi162Scf00732g00447 Petunia axillaris HOM05D003671 ORTHO05D004285 5.4e-114 416.4 838 39.3
SpUn1372_0010 Schrenkiella parvula HOM05D003671 ORTHO05D004285 1.5e-108 398.3 370 62.7
PSO675G2859 Papaver somniferum HOM05D003671 ORTHO05D004285 2.9e-107 394.0 796 39.1
ECA236G1062 Erigeron canadensis HOM05D003671 ORTHO05D004285 6.6e-104 382.9 827 36.5
Sed0014254 Sechium edule HOM05D003671 ORTHO05D004285 1.2e-100 372.1 431 54.3
TPR.G4425 Trifolium pratense HOM05D003671 ORTHO05D004285 1.5e-100 371.7 720 38.8
HanXRQChr16g0510341 Helianthus annuus HOM05D003671 ORTHO05D004285 5.4e-98 363.2 788 36.9
HPP92_018092 Vanilla planifolia HOM05D003671 ORTHO05D004285 1.1e-95 355.5 847 35.4
HanXRQChr16g0510331 Helianthus annuus HOM05D003671 ORTHO05D004285 6.8e-93 346.3 718 38.0
Zm00001eb163960 Zea mays HOM05D003671 ORTHO05D004285 1.5e-87 328.6 834 34.9
Zm00001eb406310 Zea mays HOM05D003671 ORTHO05D004285 1.6e-81 308.5 821 34.3
Zm00001eb195220 Zea mays HOM05D003671 ORTHO05D004285 1.7e-80 305.1 830 34.3
ATR0012G011 Amborella trichopoda HOM05D003671 ORTHO05D004285 3.3e-79 300.8 816 32.8
CDE04G0380 Ceratophyllum demersum HOM05D003671 ORTHO05D004285 2.9e-75 287.7 741 34.0
CDE07G1826 Ceratophyllum demersum HOM05D003671 ORTHO05D004285 1.6e-73 282.0 840 31.5
Oeu060441.1 Olea europaea HOM05D003671 ORTHO05D004285 1.0e-72 279.3 356 46.3
Os11g0113200 Oryza sativa ssp. japonica HOM05D003671 ORTHO05D004285 1.6e-70 271.9 733 34.5
Os12g0112600 Oryza sativa ssp. japonica HOM05D003671 ORTHO05D004285 2.1e-70 271.6 840 33.0
HPP92_022854 Vanilla planifolia HOM05D003671 ORTHO05D004654 1.1e-69 269.2 626 35.0
ATR0681G108 Amborella trichopoda HOM05D003671 ORTHO05D004285 3.4e-68 264.2 403 43.9
Nn5g26901 Nelumbo nucifera HOM05D003671 ORTHO05D004285 4.6e-65 253.8 598 35.6
SEGI_37069 Sequoiadendron giganteum HOM05D003671 ORTHO05D004285 1.4e-58 232.3 946 29.0
CAN.G179.38 Capsicum annuum HOM05D003671 ORTHO05D004285 3.2e-58 231.1 257 54.5
SEGI_23390 Sequoiadendron giganteum HOM05D003671 ORTHO05D004285 5.1e-56 223.8 296 46.3
Mapoly0100s0047 Marchantia polymorpha HOM05D003671 ORTHO05D004285 3.1e-53 214.5 337 42.7
Oeu026958.1 Olea europaea HOM05D003671 ORTHO05D004285 3.4e-52 211.1 494 39.9
SEGI_27030 Sequoiadendron giganteum HOM05D003671 ORTHO05D004285 1.0e-51 209.5 279 45.2
AagrBONN_evm.TU.Sc2ySwM_344.630 Anthoceros agrestis HOM05D003671 ORTHO05D004285 1.7e-51 208.8 362 40.3
Pp3c12_1780 Physcomitrium patens HOM05D003671 ORTHO05D004285 6.5e-51 206.8 357 42.9
SEGI_38845 Sequoiadendron giganteum HOM05D003671 ORTHO05D004285 1.2e-49 202.6 701 31.7
VMungo1383G0904 Vigna mungo HOM05D003671 ORTHO05D004285 3.6e-41 174.5 274 40.5
SEGI_35920 Sequoiadendron giganteum HOM05D003671 ORTHO05D004285 3.7e-38 164.5 130 60.0
Sp5g10620 Schrenkiella parvula HOM05D003671 ORTHO05D004285 2.4e-37 161.8 330 35.2
TPR.G35754 Trifolium pratense HOM05D003671 ORTHO05D004285 1.7e-35 155.6 81 97.5
Sc02g0000840 Simmondsia chinensis HOM05D003671 ORTHO05D004285 1.2e-33 149.4 286 37.8
MBI03_g10316_MAGBIO Magnolia biondii HOM05D003671 ORTHO05D004285 2.8e-30 138.3 93 75.3
Haze_23239 Corylus avellana HOM05D003671 ORTHO05D004285 1.2e-17 96.3 268 36.2
ATR0681G103 Amborella trichopoda HOM05D003671 ORTHO05D004285 1.8e-13 82.4 161 41.0
unitig_27.g24881 Utricularia gibba HOM05D003671 ORTHO05D004285 9.8e-07 60.1 39 66.7


User provided reference genes

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