Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_010923 Daucus carota HOM05D005552 ORTHO05D006743 0.0e+00 1305.8 698 100.0
Dinv39890 Davidia involucrata HOM05D005552 ORTHO05D006743 8.6e-195 684.5 680 55.4
Lj4C139G4 Lonicera japonica HOM05D005552 ORTHO05D006743 1.3e-187 660.6 679 53.6
Actinidia12065 Actinidia chinensis HOM05D005552 ORTHO05D006743 2.3e-184 649.8 680 53.7
Cc02_g34610 Coffea canephora HOM05D005552 ORTHO05D006743 1.4e-181 640.6 679 52.1
Potri.001G361900 Populus trichocarpa HOM05D005552 ORTHO05D006743 4.6e-180 635.6 682 51.3
vmacro21371 Vaccinium macrocarpon HOM05D005552 ORTHO05D006743 7.8e-180 634.8 680 51.3
GSVIVG01003549001 Vitis vinifera HOM05D005552 ORTHO05D006743 1.3e-179 634.0 681 51.2
Thecc.01G050800 Theobroma cacao HOM05D005552 ORTHO05D006743 7.3e-178 628.2 680 50.9
Cfa003976 Carpinus fangiana HOM05D005552 ORTHO05D006743 9.6e-178 627.9 678 50.7
ECA232G0422 Erigeron canadensis HOM05D005552 ORTHO05D006743 2.8e-177 626.3 681 49.5
CSS0032711 Camellia sinensis var. sinensis HOM05D005552 ORTHO05D006743 4.4e-175 619.0 680 51.2
COL.COLO4_11363 Corchorus olitorius HOM05D005552 ORTHO05D006743 9.9e-175 617.8 680 50.1
Gorai.007G210400 Gossypium raimondii HOM05D005552 ORTHO05D006743 9.9e-175 617.8 680 49.7
Gohir.D11G196500 Gossypium hirsutum HOM05D005552 ORTHO05D006743 1.3e-174 617.5 680 49.9
MD15G1279300 Malus domestica HOM05D005552 ORTHO05D006743 2.2e-174 616.7 681 49.9
Oeu020899.1 Olea europaea HOM05D005552 ORTHO05D006743 2.9e-174 616.3 680 49.9
Haze_15444 Corylus avellana HOM05D005552 ORTHO05D006743 6.4e-174 615.1 678 50.6
Prupe.7G138000 Prunus persica HOM05D005552 ORTHO05D006743 2.4e-173 613.2 681 50.2
Ciclev10025258m.g Citrus clementina HOM05D005552 ORTHO05D006743 1.3e-171 607.4 680 49.4
CiPaw.01G023200 Carya illinoinensis HOM05D005552 ORTHO05D006743 2.3e-171 606.7 680 49.1
QL06p042750 Quercus lobata HOM05D005552 ORTHO05D006743 3.9e-171 605.9 677 49.6
Rhsim01G0119100 Rhododendron simsii HOM05D005552 ORTHO05D006743 8.7e-171 604.7 680 49.6
Duzib264G1173 Durio zibethinus HOM05D005552 ORTHO05D006743 2.8e-169 599.7 680 49.1
FAN26G2590 Fragaria x ananassa HOM05D005552 ORTHO05D006743 2.4e-168 596.7 681 47.7
Hma1.2p1_0873F.1_g231280 Hydrangea macrophylla HOM05D005552 ORTHO05D006743 2.4e-168 596.7 611 54.0
FAN28G0665 Fragaria x ananassa HOM05D005552 ORTHO05D006743 5.3e-168 595.5 681 47.7
FvH4_1g15480 Fragaria vesca HOM05D005552 ORTHO05D006743 6.9e-168 595.1 681 47.7
CANSAT64G0631 Cannabis sativa HOM05D005552 ORTHO05D006743 9.0e-168 594.7 681 48.8
Eucgr.I00976 Eucalyptus grandis HOM05D005552 ORTHO05D006743 1.2e-167 594.3 680 49.0
Sopen01g043680 Solanum pennellii HOM05D005552 ORTHO05D006743 2.6e-167 593.2 680 47.5
arahy.Tifrunner.gnm1.ann1.21BGDZ Arachis hypogaea HOM05D005552 ORTHO05D006743 4.4e-167 592.4 703 48.2
Glyma.11G058500 Glycine max HOM05D005552 ORTHO05D006743 4.4e-167 592.4 680 49.6
PGSC0003DMG400024733 Solanum tuberosum HOM05D005552 ORTHO05D006743 5.8e-167 592.0 680 48.1
MD02G1166800 Malus domestica HOM05D005552 ORTHO05D006743 9.9e-167 591.3 675 48.1
Glyma.01G183800 Glycine max HOM05D005552 ORTHO05D006743 2.2e-166 590.1 699 48.1
HanXRQChr14g0430701 Helianthus annuus HOM05D005552 ORTHO05D006743 3.8e-166 589.3 681 48.0
RcHm_v2.0_Chr2g0104711 Rosa chinensis HOM05D005552 ORTHO05D006743 3.8e-166 589.3 681 47.4
TWI09G0520 Tripterygium wilfordii HOM05D005552 ORTHO05D006743 3.8e-166 589.3 680 47.4
Lsat_1_v5_gn_4_168700 Lactuca sativa HOM05D005552 ORTHO05D006743 6.4e-166 588.6 683 47.4
FAN19G0212 Fragaria x ananassa HOM05D005552 ORTHO05D006743 1.1e-165 587.8 681 47.1
Solyc01g100190.4 Solanum lycopersicum HOM05D005552 ORTHO05D006743 2.4e-165 586.6 680 47.2
Medtr5g017970 Medicago truncatula HOM05D005552 ORTHO05D006743 5.4e-165 585.5 678 47.6
Ca_24792_v3 Cicer arietinum L. HOM05D005552 ORTHO05D006743 3.5e-164 582.8 678 47.1
Cpa.g.sc6.396 Carica papaya HOM05D005552 ORTHO05D006743 8.7e-163 578.2 680 48.7
CAN.G1273.15 Capsicum annuum HOM05D005552 ORTHO05D006743 1.9e-162 577.0 681 47.3
Psat2g165040 Pisum sativum HOM05D005552 ORTHO05D006743 3.3e-162 576.2 678 46.6
VMungo1215G1500 Vigna mungo HOM05D005552 ORTHO05D006743 1.6e-161 573.9 680 47.8
PGR119G0642 Punica granatum HOM05D005552 ORTHO05D006743 2.1e-161 573.5 679 47.0
Nitab4.5_0002715g0120 Nicotiana tabacum HOM05D005552 ORTHO05D006743 8.1e-161 571.6 681 47.9
Sc16g0001610 Simmondsia chinensis HOM05D005552 ORTHO05D006743 8.1e-161 571.6 680 46.9
TPR.G11337 Trifolium pratense HOM05D005552 ORTHO05D006743 1.8e-160 570.5 678 46.9
THA.LOC104807572 Tarenaya hassleriana HOM05D005552 ORTHO05D006743 2.0e-159 567.0 681 45.8
PSO541G0461 Papaver somniferum HOM05D005552 ORTHO05D006743 4.5e-159 565.8 682 46.5
Lalb_Chr05g0213171 Lupinus albus HOM05D005552 ORTHO05D006743 5.8e-159 565.5 680 47.1
MSTRG.5133 Avicennia marina HOM05D005552 ORTHO05D006743 1.7e-158 563.9 680 46.6
PSO675G7200 Papaver somniferum HOM05D005552 ORTHO05D006743 2.2e-158 563.5 682 46.2
Manes.16G089500 Manihot esculenta HOM05D005552 ORTHO05D006743 4.2e-157 559.3 593 51.3
Aqoxy6G00889 Aquilegia oxysepala HOM05D005552 ORTHO05D006743 4.6e-156 555.8 681 46.4
Lj6g0016933 Lotus japonicus HOM05D005552 ORTHO05D006743 5.1e-155 552.4 680 46.3
Sp7g34600 Schrenkiella parvula HOM05D005552 ORTHO05D006743 5.6e-154 548.9 683 46.7
Sed0018600 Sechium edule HOM05D005552 ORTHO05D006743 7.4e-154 548.5 680 46.2
AUR62003843 Chenopodium quinoa HOM05D005552 ORTHO05D006743 1.3e-153 547.7 680 45.3
CARHR245320 Cardamine hirsuta HOM05D005552 ORTHO05D006743 6.2e-153 545.4 681 45.7
Lj2g0010083 Lotus japonicus HOM05D005552 ORTHO05D006743 6.2e-153 545.4 680 46.5
ClCG01G016650 Citrullus lanatus HOM05D005552 ORTHO05D006743 1.4e-152 544.3 680 45.3
Phvul.002G021300 Phaseolus vulgaris HOM05D005552 ORTHO05D006743 2.4e-152 543.5 611 48.4
AUR62001963 Chenopodium quinoa HOM05D005552 ORTHO05D006743 2.0e-151 540.4 680 45.3
AT4G37190 Arabidopsis thaliana HOM05D005552 ORTHO05D006743 4.5e-151 539.3 683 46.1
AL7G13990 Arabidopsis lyrata HOM05D005552 ORTHO05D006743 7.6e-151 538.5 683 46.0
arahy.Tifrunner.gnm1.ann1.A2BBUY Arachis hypogaea HOM05D005552 ORTHO05D006743 1.3e-150 537.7 680 46.2
Carub.0007s0338 Capsella rubella HOM05D005552 ORTHO05D006743 2.2e-150 537.0 683 45.7
Hund16313 Selenicereus undatus HOM05D005552 ORTHO05D006743 2.2e-150 537.0 680 45.4
SGA_v2.0_scaffold36G14364 Striga asiatica HOM05D005552 ORTHO05D006743 4.9e-150 535.8 732 41.8
MELO3C007542.2 Cucumis melo HOM05D005552 ORTHO05D006743 8.4e-150 535.0 680 44.9
Peaxi162Scf00073g00015 Petunia axillaris HOM05D005552 ORTHO05D006743 4.2e-149 532.7 596 49.3
CDE04G2042 Ceratophyllum demersum HOM05D005552 ORTHO05D006743 1.9e-146 523.9 679 43.7
Aa31LG6G13810 Aethionema arabicum HOM05D005552 ORTHO05D006743 2.5e-146 523.5 681 44.8
CsaV3_6G043060 Cucumis sativus L. HOM05D005552 ORTHO05D006743 3.3e-146 523.1 612 48.0
Thhalv10024834m.g Eutrema salsugineum HOM05D005552 ORTHO05D006743 7.4e-146 521.9 681 44.8
Nitab4.5_0000368g0430 Nicotiana tabacum HOM05D005552 ORTHO05D006743 7.4e-146 521.9 680 45.3
Hma1.2p1_0873F.1_g231290 Hydrangea macrophylla HOM05D005552 ORTHO05D006743 2.1e-145 520.4 538 53.7
A03p64710 Brassica napus HOM05D005552 ORTHO05D006743 4.8e-145 519.2 679 43.4
BraA03t15535Z Brassica rapa HOM05D005552 ORTHO05D006743 4.8e-145 519.2 679 43.4
Sopen01g043710 Solanum pennellii HOM05D005552 ORTHO05D006743 2.6e-143 513.5 569 49.0
ATR0767G265 Amborella trichopoda HOM05D005552 ORTHO05D006743 2.9e-142 510.0 681 43.3
BcaNung03946 Brassica carinata HOM05D005552 ORTHO05D006743 1.9e-141 507.3 677 43.7
Os03g0240900 Oryza sativa ssp. japonica HOM05D005552 ORTHO05D006743 2.7e-140 503.4 682 41.3
BcaNung04273 Brassica carinata HOM05D005552 ORTHO05D006743 2.3e-139 500.4 679 43.0
C07p62120 Brassica napus HOM05D005552 ORTHO05D006743 5.1e-139 499.2 679 43.0
BolC7t46629H Brassica oleracea HOM05D005552 ORTHO05D006743 5.1e-139 499.2 679 43.0
Zm00001eb030410 Zea mays HOM05D005552 ORTHO05D006743 3.4e-135 486.5 679 41.2
HPP92_017765 Vanilla planifolia HOM05D005552 ORTHO05D006743 5.0e-134 482.6 680 41.8
TAR628G0695 Trochodendron aralioides HOM05D005552 ORTHO05D006743 7.4e-130 468.8 442 55.7
Oeu035482.1 Olea europaea HOM05D005552 ORTHO05D006743 1.8e-123 447.6 488 51.0
SEGI_18564 Sequoiadendron giganteum HOM05D005552 ORTHO05D006743 1.1e-120 438.3 669 38.7
Gohir.A11G189700 Gossypium hirsutum HOM05D005552 ORTHO05D006743 4.1e-120 436.4 406 55.2
FvH4_5g33502 Fragaria vesca HOM05D005552 ORTHO05D006743 1.2e-119 434.9 592 43.9
Nn6g32078 Nelumbo nucifera HOM05D005552 ORTHO05D006743 7.7e-119 432.2 438 52.7
FAN18G3771 Fragaria x ananassa HOM05D005552 ORTHO05D006743 2.6e-106 390.6 453 48.8
TAR376G0305 Trochodendron aralioides HOM05D005552 ORTHO05D006743 2.0e-103 380.9 511 42.9
CDE06G0261 Ceratophyllum demersum HOM05D005552 ORTHO05D006743 2.2e-102 377.5 555 40.0
Os12g0586400 Oryza sativa ssp. japonica HOM05D005552 ORTHO05D006743 7.5e-98 362.5 685 34.3
Atru.chr3.424 Acer truncatum HOM05D005552 ORTHO05D006743 3.3e-93 347.1 365 48.8
HanXRQChr04g0119851 Helianthus annuus HOM05D005552 ORTHO05D006743 1.4e-88 331.6 308 54.9
Mapoly0024s0139 Marchantia polymorpha HOM05D005552 ORTHO05D006743 4.7e-84 316.6 708 31.1
FAN08G3227 Fragaria x ananassa HOM05D005552 ORTHO05D006743 1.3e-81 308.5 353 47.9
SMO358G0218 Selaginella moellendorffii HOM05D005552 ORTHO05D006743 3.7e-81 307.0 680 33.8
Pp3c2_14950 Physcomitrium patens HOM05D005552 ORTHO05D006743 9.8e-74 282.3 702 29.6
unitig_26.g9473 Utricularia gibba HOM05D005552 ORTHO05D006743 4.9e-57 226.9 245 48.6
HanXRQChr04g0119841 Helianthus annuus HOM05D005552 ORTHO05D006743 1.9e-53 214.9 208 53.8
Atru.chr2.470 Acer truncatum HOM05D005552 ORTHO05D006743 2.9e-49 201.1 163 63.8
CBR_g38209 Chara braunii HOM05D005552 ORTHO05D006743 9.3e-48 196.1 579 26.3
unitig_26.g9472 Utricularia gibba HOM05D005552 ORTHO05D006743 1.7e-46 191.8 312 38.5
Atru.chr3.423 Acer truncatum HOM05D005552 ORTHO05D006743 8.7e-46 189.5 159 61.6
Psat4g201960 Pisum sativum HOM05D005552 ORTHO05D006743 3.8e-33 147.5 144 52.8
SHI23011 Sapria himalayana HOM05D005552 ORTHO05D006743 7.1e-32 143.3 152 50.0
SHI23015 Sapria himalayana HOM05D005552 ORTHO05D006743 1.1e-27 129.4 128 50.0
arahy.Tifrunner.gnm1.ann1.S73BBB Arachis hypogaea HOM05D005552 ORTHO05D006743 1.6e-23 115.5 96 56.2
C01p02170 Brassica napus HOM05D005552 ORTHO05D006743 1.1e-19 102.8 115 47.0
BolC1t00209H Brassica oleracea HOM05D005552 ORTHO05D006743 1.1e-19 102.8 115 47.0
MCO05G662 Micromonas commoda HOM05D005552 ORTHO05D006743 3.1e-19 101.3 445 23.4
Cre01.g043700 Chlamydomonas reinhardtii HOM05D005552 ORTHO05D006743 5.3e-19 100.5 586 22.9
Psat1g136760 Pisum sativum HOM05D005552 ORTHO05D006743 9.1e-19 99.8 118 44.9
CSS0040680 Camellia sinensis var. sinensis HOM05D005552 ORTHO05D006743 5.0e-17 94.0 80 55.0
TAR376G0458 Trochodendron aralioides HOM05D005552 ORTHO05D006743 6.5e-17 93.6 73 64.4
CSS0023439 Camellia sinensis var. sinensis HOM05D005552 ORTHO05D006743 2.7e-15 88.2 104 46.2
Cfa026632 Carpinus fangiana HOM05D005552 ORTHO05D006743 3.0e-14 84.7 286 26.2
arahy.Tifrunner.gnm1.ann1.ENA0P5 Arachis hypogaea HOM05D005552 ORTHO05D006743 1.1e-13 82.8 110 43.6
Psat5g241560 Pisum sativum HOM05D005552 ORTHO05D006743 1.7e-12 79.0 87 47.1
Cpa.g.sc6.394 Carica papaya HOM05D005552 ORTHO05D006743 3.8e-09 67.8 118 36.4
SHI23013 Sapria himalayana HOM05D001839 ORTHO05D001867 4.7e-07 60.8 70 45.7


User provided reference genes

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