Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_010904 Daucus carota HOM05D005929 ORTHO05D007869 0.0e+00 1347.0 719 100.0
Dinv39868 Davidia involucrata HOM05D005929 ORTHO05D007869 1.8e-264 916.0 720 70.0
Actinidia16503 Actinidia chinensis HOM05D005929 ORTHO05D007869 2.0e-263 912.5 721 68.7
CSS0000081 Camellia sinensis var. sinensis HOM05D005929 ORTHO05D007869 2.7e-260 902.1 723 69.6
Manes.12G099700 Manihot esculenta HOM05D005929 ORTHO05D007869 2.3e-251 872.5 720 67.8
Prupe.7G135500 Prunus persica HOM05D005929 ORTHO05D007869 8.2e-249 864.0 726 66.7
Cc07_g05890 Coffea canephora HOM05D005929 ORTHO05D007869 1.5e-247 859.8 719 65.9
MD00G1045200 Malus domestica HOM05D005929 ORTHO05D007869 6.5e-246 854.4 731 66.1
TAR628G1297 Trochodendron aralioides HOM05D005929 ORTHO05D007869 8.4e-246 854.0 724 66.2
Lalb_Chr05g0226621 Lupinus albus HOM05D005929 ORTHO05D007869 4.2e-245 851.7 721 64.2
Ciclev10025029m.g Citrus clementina HOM05D005929 ORTHO05D007869 2.8e-241 839.0 720 64.9
VMungo0251G2155 Vigna mungo HOM05D005929 ORTHO05D007869 2.8e-241 839.0 719 63.0
Phvul.003G244900 Phaseolus vulgaris HOM05D005929 ORTHO05D007869 4.8e-241 838.2 720 63.5
Ca_21176_v3 Cicer arietinum L. HOM05D005929 ORTHO05D007869 6.3e-241 837.8 718 64.1
GSVIVG01022148001 Vitis vinifera HOM05D005929 ORTHO05D007869 1.8e-240 836.3 719 64.4
CsaV3_6G043190 Cucumis sativus L. HOM05D005929 ORTHO05D007869 3.1e-240 835.5 729 64.3
Cfa004003 Carpinus fangiana HOM05D005929 ORTHO05D007869 4.1e-240 835.1 728 65.7
FvH4_1g15790 Fragaria vesca HOM05D005929 ORTHO05D007869 4.1e-240 835.1 722 64.7
Potri.005G137100 Populus trichocarpa HOM05D005929 ORTHO05D007869 5.3e-240 834.7 728 63.2
COL.COLO4_11392 Corchorus olitorius HOM05D005929 ORTHO05D007869 6.9e-240 834.3 722 65.7
FAN19G1416 Fragaria x ananassa HOM05D005929 ORTHO05D007869 9.0e-240 833.9 722 64.5
MELO3C007555.2 Cucumis melo HOM05D005929 ORTHO05D007869 1.5e-239 833.2 729 63.6
MD02G1169700 Malus domestica HOM05D005929 ORTHO05D007869 2.0e-239 832.8 724 65.3
RcHm_v2.0_Chr2g0105071 Rosa chinensis HOM05D005929 ORTHO05D007869 3.4e-239 832.0 723 65.7
TPR.G19031 Trifolium pratense HOM05D005929 ORTHO05D007869 5.9e-239 831.2 719 63.1
CANSAT56G1082 Cannabis sativa HOM05D005929 ORTHO05D007869 1.0e-238 830.5 739 63.7
Lj4g0006502 Lotus japonicus HOM05D005929 ORTHO05D007869 1.0e-238 830.5 721 64.8
Glyma.17G175900 Glycine max HOM05D005929 ORTHO05D007869 1.7e-238 829.7 718 64.8
FAN23G0057 Fragaria x ananassa HOM05D005929 ORTHO05D007869 5.0e-238 828.2 720 64.9
FAN28G0152 Fragaria x ananassa HOM05D005929 ORTHO05D007869 5.0e-238 828.2 722 64.4
FAN26G1042 Fragaria x ananassa HOM05D005929 ORTHO05D007869 1.4e-237 826.6 722 64.1
Psat4g087280 Pisum sativum HOM05D005929 ORTHO05D007869 1.4e-237 826.6 720 63.1
Nn1g05837 Nelumbo nucifera HOM05D005929 ORTHO05D007869 3.2e-237 825.5 728 64.6
Sabra05G0109600 Salix brachista HOM05D005929 ORTHO05D007869 3.2e-237 825.5 721 63.0
ClCG01G016760 Citrullus lanatus HOM05D005929 ORTHO05D007869 5.5e-237 824.7 724 63.4
Gorai.007G211400 Gossypium raimondii HOM05D005929 ORTHO05D007869 7.2e-237 824.3 724 62.8
MBI06_g04503_MAGBIO Magnolia biondii HOM05D005929 ORTHO05D007869 1.6e-236 823.2 739 62.9
Glyma.05G084300 Glycine max HOM05D005929 ORTHO05D007869 2.1e-236 822.8 720 62.8
PGR102G2065 Punica granatum HOM05D005929 ORTHO05D007869 2.7e-236 822.4 725 62.2
MSTRG.23760 Avicennia marina HOM05D005929 ORTHO05D007869 4.6e-236 821.6 722 63.3
Duzib147G0952 Durio zibethinus HOM05D005929 ORTHO05D007869 2.3e-235 819.3 726 62.7
Lj4A143G78 Lonicera japonica HOM05D005929 ORTHO05D007869 2.3e-235 819.3 723 63.9
Migut.H00446 Erythranthe guttata HOM05D005929 ORTHO05D007869 1.1e-234 817.0 725 62.5
Thecc.01G053700 Theobroma cacao HOM05D005929 ORTHO05D007869 3.3e-234 815.5 723 64.2
Sed0025648 Sechium edule HOM05D005929 ORTHO05D007869 5.7e-234 814.7 723 62.2
TWI09G0459 Tripterygium wilfordii HOM05D005929 ORTHO05D007869 2.2e-233 812.8 725 63.2
SGA_v2.0_scaffold15G07274 Striga asiatica HOM05D005929 ORTHO05D007869 3.1e-232 808.9 717 62.1
EL10Ac6g15157 Beta vulgaris HOM05D005929 ORTHO05D007869 1.2e-231 807.0 737 62.8
TWI53G1997 Tripterygium wilfordii HOM05D005929 ORTHO05D007869 2.0e-231 806.2 722 61.1
CiPaw.01G019600 Carya illinoinensis HOM05D005929 ORTHO05D007869 1.1e-229 800.4 725 64.1
Gorai.003G022900 Gossypium raimondii HOM05D005929 ORTHO05D007869 1.1e-229 800.4 717 61.6
Lsat_1_v5_gn_4_168021 Lactuca sativa HOM05D005929 ORTHO05D007869 2.5e-229 799.3 711 64.1
Gohir.A11G190800 Gossypium hirsutum HOM05D005929 ORTHO05D007869 3.2e-229 798.9 721 62.6
Gohir.A02G159200 Gossypium hirsutum HOM05D005929 ORTHO05D007869 4.2e-229 798.5 717 61.2
Gohir.D03G021300 Gossypium hirsutum HOM05D005929 ORTHO05D007869 5.5e-229 798.1 716 61.9
PSO210G3061 Papaver somniferum HOM05D005929 ORTHO05D007869 1.6e-228 796.6 723 61.4
PSO170G4100 Papaver somniferum HOM05D005929 ORTHO05D007869 4.7e-228 795.0 724 61.6
HanXRQChr15g0490721 Helianthus annuus HOM05D005929 ORTHO05D007869 1.0e-227 793.9 733 62.8
Rhsim08G0101600 Rhododendron simsii HOM05D005929 ORTHO05D007869 1.8e-227 793.1 944 51.3
Gohir.D11G197600 Gossypium hirsutum HOM05D005929 ORTHO05D007869 5.1e-227 791.6 721 62.7
Hund13561 Selenicereus undatus HOM05D005929 ORTHO05D007869 2.8e-225 785.8 731 62.1
Oeu039068.2 Olea europaea HOM05D005929 ORTHO05D007869 1.4e-224 783.5 751 58.6
ECA232G2456 Erigeron canadensis HOM05D005929 ORTHO05D007869 5.3e-224 781.6 726 62.0
Solyc02g090650.4 Solanum lycopersicum HOM05D005929 ORTHO05D007869 1.7e-222 776.5 714 62.2
Eucgr.H02007 Eucalyptus grandis HOM05D005929 ORTHO05D007869 2.2e-222 776.2 736 60.9
arahy.Tifrunner.gnm1.ann1.UKY0C7 Arachis hypogaea HOM05D005929 ORTHO05D007869 1.1e-221 773.9 796 57.3
CiPaw.02G008900 Carya illinoinensis HOM05D005929 ORTHO05D007869 1.5e-221 773.5 720 61.7
PGSC0003DMG400015776 Solanum tuberosum HOM05D005929 ORTHO05D007869 1.5e-221 773.5 718 61.3
Nitab4.5_0010605g0010 Nicotiana tabacum HOM05D005929 ORTHO05D007869 2.5e-221 772.7 727 60.4
Peaxi162Scf00964g00160 Petunia axillaris HOM05D005929 ORTHO05D007869 4.2e-221 771.9 723 59.3
Sopen02g035300 Solanum pennellii HOM05D005929 ORTHO05D007869 4.2e-221 771.9 718 61.8
Sc03g0001480 Simmondsia chinensis HOM05D005929 ORTHO05D007869 7.2e-221 771.2 715 60.6
Atru.chr3.351 Acer truncatum HOM05D005929 ORTHO05D007869 5.2e-219 765.0 634 66.7
CAN.G836.71 Capsicum annuum HOM05D005929 ORTHO05D007869 1.8e-216 756.5 720 60.8
vmacro17944 Vaccinium macrocarpon HOM05D005929 ORTHO05D007869 7.0e-216 754.6 931 50.1
THA.LOC104821272 Tarenaya hassleriana HOM05D005929 ORTHO05D007869 1.0e-214 750.7 726 59.8
Nitab4.5_0000310g0090 Nicotiana tabacum HOM05D005929 ORTHO05D007869 9.4e-213 744.2 729 58.8
Aa31LG1G15360 Aethionema arabicum HOM05D005929 ORTHO05D007869 5.9e-207 724.9 770 56.2
unitig_899.g14965 Utricularia gibba HOM05D005929 ORTHO05D007869 5.9e-207 724.9 747 57.6
Thhalv10003742m.g Eutrema salsugineum HOM05D005929 ORTHO05D007869 2.9e-206 722.6 725 55.7
HPP92_009382 Vanilla planifolia HOM05D005929 ORTHO05D007869 5.0e-206 721.8 728 59.1
Sp2g29870 Schrenkiella parvula HOM05D005929 ORTHO05D007869 4.2e-205 718.8 726 56.9
AL8G44640 Arabidopsis lyrata HOM05D005929 ORTHO05D007869 8.0e-204 714.5 729 57.6
ATR0100G001 Amborella trichopoda HOM05D005929 ORTHO05D007869 1.2e-202 710.7 728 55.4
Aqoxy5G01270 Aquilegia oxysepala HOM05D005929 ORTHO05D007869 1.3e-201 707.2 720 56.9
Carub.0008s2770 Capsella rubella HOM05D005929 ORTHO05D007869 4.1e-200 702.2 737 57.4
C07p24970 Brassica napus HOM05D005929 ORTHO05D007869 4.2e-197 692.2 725 55.2
Zm00001eb223840 Zea mays HOM05D005929 ORTHO05D007869 1.2e-196 690.6 730 55.9
BraA07t29438Z Brassica rapa HOM05D005929 ORTHO05D007869 4.7e-196 688.7 726 55.0
BcaC06g34750 Brassica carinata HOM05D005929 ORTHO05D007869 3.0e-195 686.0 725 54.8
QL06p041881 Quercus lobata HOM05D005929 ORTHO05D007869 1.2e-194 684.1 593 64.2
Os10g0382300 Oryza sativa ssp. japonica HOM05D005929 ORTHO05D007869 2.0e-194 683.3 731 55.4
A07p17110 Brassica napus HOM05D005929 ORTHO05D007869 3.4e-194 682.6 727 54.7
BcaB02g09988 Brassica carinata HOM05D005929 ORTHO05D007869 2.8e-193 679.5 725 54.3
BolC7t43027H Brassica oleracea HOM05D005929 ORTHO05D007869 2.0e-191 673.3 749 53.0
Hma1.2p1_0200F.1_g086000 Hydrangea macrophylla HOM05D005929 ORTHO05D007869 1.3e-190 670.6 577 66.2
AUR62003860 Chenopodium quinoa HOM05D005929 ORTHO05D007869 6.0e-183 645.2 623 57.6
AUR62001947 Chenopodium quinoa HOM05D005929 ORTHO05D007869 1.5e-181 640.6 617 57.1
Ca_22183_v3 Cicer arietinum L. HOM05D005929 ORTHO05D007869 2.0e-178 630.2 588 60.0
Cpa.g.sc55.172 Carica papaya HOM05D005929 ORTHO05D007869 2.9e-177 626.3 555 62.0
Ah.03g144730 Amaranthus hybridus HOM05D005929 ORTHO05D007869 2.1e-172 610.1 596 59.7
Duzib264G1189 Durio zibethinus HOM05D005929 ORTHO05D007869 1.7e-161 573.9 719 49.2
Lalb_Chr09g0333751 Lupinus albus HOM05D005929 ORTHO05D007869 4.6e-159 565.8 534 58.1
CARHR280890 Cardamine hirsuta HOM05D005929 ORTHO05D007869 4.3e-157 559.3 596 54.7
AT5G66810 Arabidopsis thaliana HOM05D005929 ORTHO05D007869 5.4e-144 515.8 517 58.8
Pp3c4_14260 Physcomitrium patens HOM05D005929 ORTHO05D007869 3.7e-124 449.9 768 38.2
Mapoly0148s0013 Marchantia polymorpha HOM05D005929 ORTHO05D007869 6.3e-124 449.1 788 36.8
SMO116G0373 Selaginella moellendorffii HOM05D005929 ORTHO05D007869 6.5e-105 386.0 717 35.4
DCAR_001419 Daucus carota HOM05D005929 ORTHO05D007869 3.0e-102 377.1 295 69.8
SalBow1G6022 Salvia bowleyana HOM05D005929 ORTHO05D007869 9.4e-96 355.5 299 64.2
CDE10G0678 Ceratophyllum demersum HOM05D005929 ORTHO05D007869 3.6e-95 353.6 273 68.1
CDE10G0504 Ceratophyllum demersum HOM05D005929 ORTHO05D007869 1.8e-83 314.7 443 45.8
Haze_15421 Corylus avellana HOM05D005929 ORTHO05D007869 8.6e-81 305.8 464 44.2
SEGI_10908 Sequoiadendron giganteum HOM05D005929 ORTHO05D000002 5.0e-73 280.0 437 42.6
Hma1.2p1_0200F.1_g086010 Hydrangea macrophylla HOM05D005929 ORTHO05D007869 4.9e-68 263.5 306 51.0
RcHm_v2.0_Chr7g0235891 Rosa chinensis HOM05D005929 ORTHO05D007869 1.7e-57 228.4 189 63.5
Dinv29975 Davidia involucrata HOM05D005929 ORTHO05D007869 1.9e-56 224.9 368 42.4
PSO782G4943 Papaver somniferum HOM05D005929 ORTHO05D007869 4.6e-50 203.8 182 62.1
Lalb_Chr09g0333761 Lupinus albus HOM05D005929 ORTHO05D007869 1.4e-46 192.2 160 74.4
PSO339G4212 Papaver somniferum HOM05D005929 ORTHO05D007869 1.7e-44 185.3 154 61.7
QL06p041873 Quercus lobata HOM05D005929 ORTHO05D007869 9.9e-37 159.5 130 75.4
Cpa.g.sc55.170 Carica papaya HOM05D005929 ORTHO05D007869 2.1e-34 151.8 133 71.4
ATR0833G001 Amborella trichopoda HOM05D005929 ORTHO05D007869 9.0e-30 136.3 129 62.0
MD15G1282000 Malus domestica HOM05D005929 ORTHO05D007869 1.2e-29 136.0 107 70.1
Lsat_1_v5_gn_2_14601 Lactuca sativa HOM05D005929 ORTHO05D029973 1.7e-28 132.1 158 52.5
MD15G1282100 Malus domestica HOM05D005929 ORTHO05D007869 1.7e-28 132.1 97 69.1
MBI08_g05057_MAGBIO Magnolia biondii HOM05D005929 ORTHO05D029973 3.1e-22 111.3 111 54.1
QL06p041946 Quercus lobata HOM05D005929 ORTHO05D007869 1.5e-16 92.4 152 44.1
Lsat_1_v5_gn_2_40080 Lactuca sativa HOM05D005929 ORTHO05D029973 4.3e-08 64.3 117 39.3
CAN.G363.39 Capsicum annuum HOM05D005929 ORTHO05D007869 2.4e-06 58.5 119 36.1


User provided reference genes

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