Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_010880 Daucus carota HOM05D006615 ORTHO05D007999 2.4e-117 425.6 231 100.0
CSS0020579 Camellia sinensis var. sinensis HOM05D006615 ORTHO05D007999 3.7e-78 295.4 223 68.2
Lsat_1_v5_gn_4_164980 Lactuca sativa HOM05D006615 ORTHO05D007999 1.1e-77 293.9 231 70.6
Rhsim10G0115300 Rhododendron simsii HOM05D006615 ORTHO05D007999 2.4e-77 292.7 230 69.6
FAN28G0965 Fragaria x ananassa HOM05D006615 ORTHO05D007999 4.1e-77 292.0 226 71.7
HanXRQChr09g0263661 Helianthus annuus HOM05D006615 ORTHO05D007999 4.1e-77 292.0 225 72.9
FAN23G1998 Fragaria x ananassa HOM05D006615 ORTHO05D007999 5.4e-77 291.6 226 71.2
Nn5g30349 Nelumbo nucifera HOM05D006615 ORTHO05D007999 5.4e-77 291.6 227 71.8
Actinidia12040 Actinidia chinensis HOM05D006615 ORTHO05D007999 7.0e-77 291.2 224 62.5
TAR381G0796 Trochodendron aralioides HOM05D006615 ORTHO05D007999 7.0e-77 291.2 225 71.1
vmacro05309 Vaccinium macrocarpon HOM05D006615 ORTHO05D007999 7.0e-77 291.2 228 68.0
Atru.chr3.300 Acer truncatum HOM05D006615 ORTHO05D007999 1.2e-76 290.4 226 70.8
FAN26G2627 Fragaria x ananassa HOM05D006615 ORTHO05D007999 1.2e-76 290.4 226 71.2
Oeu014828.1 Olea europaea HOM05D006615 ORTHO05D007999 1.6e-76 290.0 225 69.3
MD15G1285700 Malus domestica HOM05D006615 ORTHO05D007999 2.7e-76 289.3 224 71.4
RcHm_v2.0_Chr2g0105951 Rosa chinensis HOM05D006615 ORTHO05D007999 3.5e-76 288.9 226 70.8
Prupe.7G131100 Prunus persica HOM05D006615 ORTHO05D007999 4.5e-76 288.5 224 71.4
MD02G1174700 Malus domestica HOM05D006615 ORTHO05D007999 5.9e-76 288.1 224 71.9
Sabra05G0110900 Salix brachista HOM05D006615 ORTHO05D007999 7.8e-76 287.7 225 70.2
Cc07_g06140 Coffea canephora HOM05D006615 ORTHO05D007999 1.7e-75 286.6 225 71.6
Peaxi162Scf00549g00014 Petunia axillaris HOM05D006615 ORTHO05D007999 1.7e-75 286.6 213 72.3
Haze_15377 Corylus avellana HOM05D006615 ORTHO05D007999 2.9e-75 285.8 225 70.7
FvH4_1g16240 Fragaria vesca HOM05D006615 ORTHO05D007999 2.9e-75 285.8 225 70.7
Sopen02g037800 Solanum pennellii HOM05D006615 ORTHO05D007999 2.9e-75 285.8 210 74.3
TAR625G0931 Trochodendron aralioides HOM05D006615 ORTHO05D007999 2.9e-75 285.8 225 70.7
Ciclev10026421m.g Citrus clementina HOM05D006615 ORTHO05D007999 5.0e-75 285.0 224 68.8
Solyc02g093220.3 Solanum lycopersicum HOM05D006615 ORTHO05D007999 5.0e-75 285.0 210 73.8
PGSC0003DMG400004030 Solanum tuberosum HOM05D006615 ORTHO05D007999 5.0e-75 285.0 210 73.8
Gohir.A12G072600 Gossypium hirsutum HOM05D006615 ORTHO05D007999 8.6e-75 284.3 224 70.1
CAN.G370.40 Capsicum annuum HOM05D006615 ORTHO05D007999 1.1e-74 283.9 210 72.9
COL.COLO4_11446 Corchorus olitorius HOM05D006615 ORTHO05D007999 1.9e-74 283.1 227 70.0
QL06p040870 Quercus lobata HOM05D006615 ORTHO05D007999 3.3e-74 282.3 223 72.2
Ah.03g145470 Amaranthus hybridus HOM05D006615 ORTHO05D007999 4.3e-74 282.0 219 62.6
GSVIVG01022099001 Vitis vinifera HOM05D006615 ORTHO05D007999 9.5e-74 280.8 225 60.9
FAN19G1431 Fragaria x ananassa HOM05D006615 ORTHO05D007999 1.2e-73 280.4 225 69.8
MSTRG.2870 Avicennia marina HOM05D006615 ORTHO05D007999 1.6e-73 280.0 225 64.9
Nitab4.5_0002694g0020 Nicotiana tabacum HOM05D006615 ORTHO05D007999 2.1e-73 279.6 213 71.8
Potri.005G140000 Populus trichocarpa HOM05D006615 ORTHO05D007999 2.1e-73 279.6 225 68.4
Duzib147G0216 Durio zibethinus HOM05D006615 ORTHO05D007999 2.8e-73 279.3 229 67.2
Gohir.D12G070500 Gossypium hirsutum HOM05D006615 ORTHO05D007999 2.8e-73 279.3 224 64.3
Gorai.008G077500 Gossypium raimondii HOM05D006615 ORTHO05D007999 2.8e-73 279.3 224 64.3
CSS0005072 Camellia sinensis var. sinensis HOM05D006615 ORTHO05D007999 4.7e-73 278.5 223 60.1
AUR62003898 Chenopodium quinoa HOM05D006615 ORTHO05D007999 4.7e-73 278.5 216 63.0
Hma1.2p1_0670F.1_g200450 Hydrangea macrophylla HOM05D006615 ORTHO05D007999 1.0e-72 277.3 222 61.7
AUR62001910 Chenopodium quinoa HOM05D006615 ORTHO05D007999 1.8e-72 276.6 216 62.5
Aqoxy5G01194 Aquilegia oxysepala HOM05D006615 ORTHO05D007999 3.0e-72 275.8 229 58.5
Sabra07G0040600 Salix brachista HOM05D006615 ORTHO05D007999 4.0e-72 275.4 223 60.5
Thecc.01G059100 Theobroma cacao HOM05D006615 ORTHO05D007999 6.8e-72 274.6 208 72.6
Gohir.A02G156700 Gossypium hirsutum HOM05D006615 ORTHO05D007999 1.2e-71 273.9 211 70.1
THA.LOC104821250 Tarenaya hassleriana HOM05D006615 ORTHO05D007999 1.2e-71 273.9 212 71.2
Dinv26838 Davidia involucrata HOM05D000573 ORTHO05D000425 1.5e-71 273.5 167 76.0
Aa31LG1G15650 Aethionema arabicum HOM05D006615 ORTHO05D007999 2.0e-71 273.1 221 67.4
ClCG02G012310 Citrullus lanatus HOM05D006615 ORTHO05D007999 2.0e-71 273.1 212 70.8
Oeu049899.1 Olea europaea HOM05D006615 ORTHO05D007999 2.0e-71 273.1 216 69.0
Cpa.g.sc55.125 Carica papaya HOM05D006615 ORTHO05D007999 2.6e-71 272.7 223 60.5
CDE02G1946 Ceratophyllum demersum HOM05D006615 ORTHO05D007999 3.4e-71 272.3 229 65.5
Sc03g0001700 Simmondsia chinensis HOM05D006615 ORTHO05D007999 3.4e-71 272.3 223 59.2
Thhalv10004869m.g Eutrema salsugineum HOM05D006615 ORTHO05D007999 4.4e-71 271.9 213 68.1
Sed0009491 Sechium edule HOM05D006615 ORTHO05D007999 5.8e-71 271.6 212 67.5
Manes.12G104500 Manihot esculenta HOM05D006615 ORTHO05D007999 9.8e-71 270.8 222 67.6
CsaV3_2G016460 Cucumis sativus L. HOM05D006615 ORTHO05D007999 1.3e-70 270.4 212 69.3
Gorai.003G025500 Gossypium raimondii HOM05D006615 ORTHO05D007999 1.3e-70 270.4 211 69.2
Nitab4.5_0002765g0020 Nicotiana tabacum HOM05D006615 ORTHO05D007999 1.3e-70 270.4 213 70.4
Carub.0008s2737 Capsella rubella HOM05D006615 ORTHO05D007999 1.7e-70 270.0 212 68.9
Lj4C151G8 Lonicera japonica HOM05D006615 ORTHO05D007999 6.4e-70 268.1 213 66.7
CiPaw.01G016200 Carya illinoinensis HOM05D006615 ORTHO05D007999 1.1e-69 267.3 207 61.8
Migut.H00418 Erythranthe guttata HOM05D006615 ORTHO05D007999 1.1e-69 267.3 212 70.3
Gohir.D03G024000 Gossypium hirsutum HOM05D006615 ORTHO05D007999 1.1e-69 267.3 211 68.7
BcaB02g09933 Brassica carinata HOM05D006615 ORTHO05D007999 1.4e-69 266.9 212 69.3
Sp2g29550 Schrenkiella parvula HOM05D006615 ORTHO05D007999 1.9e-69 266.5 213 68.1
C07p24600 Brassica napus HOM05D006615 ORTHO05D007999 3.2e-69 265.8 212 68.4
BolC7t42980H Brassica oleracea HOM05D006615 ORTHO05D007999 3.2e-69 265.8 212 68.4
BraA07t29407Z Brassica rapa HOM05D006615 ORTHO05D007999 3.2e-69 265.8 212 68.4
ECA232G2507 Erigeron canadensis HOM05D002761 ORTHO05D003351 3.2e-69 265.8 164 76.2
AL8G44220 Arabidopsis lyrata HOM05D006615 ORTHO05D007999 4.1e-69 265.4 212 67.9
CDE04G2757 Ceratophyllum demersum HOM05D006615 ORTHO05D007999 7.0e-69 264.6 214 67.3
A07p16820 Brassica napus HOM05D006615 ORTHO05D007999 1.2e-68 263.8 212 67.9
MELO3C020856.2 Cucumis melo HOM05D006615 ORTHO05D007999 2.0e-68 263.1 221 66.5
CARHR280510 Cardamine hirsuta HOM05D006615 ORTHO05D007999 6.0e-68 261.5 212 67.5
PSO170G0414 Papaver somniferum HOM05D006615 ORTHO05D007999 7.8e-68 261.2 222 57.2
AT5G67140 Arabidopsis thaliana HOM05D006615 ORTHO05D007999 1.3e-67 260.4 212 67.5
HPP92_026439 Vanilla planifolia HOM05D006615 ORTHO05D007999 3.0e-67 259.2 211 68.2
Hund16348 Selenicereus undatus HOM05D006615 ORTHO05D007999 6.6e-67 258.1 263 52.5
ATR0800G077 Amborella trichopoda HOM05D006615 ORTHO05D007999 1.9e-66 256.5 208 70.2
Oeu017456.1 Olea europaea HOM05D006615 ORTHO05D007999 4.3e-66 255.4 231 64.9
Psat2g167840 Pisum sativum HOM05D006615 ORTHO05D007999 5.6e-66 255.0 207 60.9
Lalb_Chr16g0378591 Lupinus albus HOM05D006615 ORTHO05D007999 7.3e-66 254.6 207 68.1
Medtr5g016890 Medicago truncatula HOM05D006615 ORTHO05D007999 7.3e-66 254.6 207 67.1
PSO210G0040 Papaver somniferum HOM05D006615 ORTHO05D007999 7.3e-66 254.6 211 57.8
Eucgr.H01687 Eucalyptus grandis HOM05D006615 ORTHO05D007999 1.2e-65 253.8 212 56.6
Glyma.11G054300 Glycine max HOM05D006615 ORTHO05D007999 1.6e-65 253.4 207 69.1
TPR.G26907 Trifolium pratense HOM05D006615 ORTHO05D007999 2.1e-65 253.1 207 59.9
Cfa004036 Carpinus fangiana HOM05D006615 ORTHO05D007999 3.6e-65 252.3 205 69.8
Glyma.01G187800 Glycine max HOM05D006615 ORTHO05D007999 1.1e-64 250.8 193 72.5
Atru.chr3.288 Acer truncatum HOM05D006615 ORTHO05D007999 2.3e-64 249.6 200 69.5
MELO3C020857.2 Cucumis melo HOM05D006615 ORTHO05D007999 2.3e-64 249.6 210 66.2
CsaV3_2G016470 Cucumis sativus L. HOM05D006615 ORTHO05D007999 5.2e-64 248.4 210 65.7
Phvul.002G017400 Phaseolus vulgaris HOM05D006615 ORTHO05D007999 2.0e-63 246.5 207 66.7
Lj2g0018871 Lotus japonicus HOM05D006615 ORTHO05D007999 4.4e-63 245.4 205 67.8
TWI09G1033 Tripterygium wilfordii HOM05D006615 ORTHO05D007999 1.7e-62 243.4 219 54.3
arahy.Tifrunner.gnm1.ann1.XJ9ES7 Arachis hypogaea HOM05D006615 ORTHO05D007999 6.4e-62 241.5 213 65.7
Lalb_Chr05g0213321 Lupinus albus HOM05D006615 ORTHO05D007999 1.1e-61 240.7 209 55.5
arahy.Tifrunner.gnm1.ann1.8K3JW9 Arachis hypogaea HOM05D006615 ORTHO05D007999 1.9e-61 240.0 213 65.3
VMungo1215G1750 Vigna mungo HOM05D006615 ORTHO05D007999 4.1e-61 238.8 207 66.7
SEGI_10636 Sequoiadendron giganteum HOM05D006615 ORTHO05D007999 8.6e-59 231.1 217 58.1
Zm00001eb375600 Zea mays HOM05D006615 ORTHO05D007999 7.5e-55 218.0 207 53.6
Actinidia36482 Actinidia chinensis HOM05D006615 ORTHO05D007999 1.7e-54 216.9 196 57.1
CANSAT01G0297 Cannabis sativa HOM05D006615 ORTHO05D007999 8.3e-54 214.5 212 51.9
Os06g0166000 Oryza sativa ssp. japonica HOM05D006615 ORTHO05D007999 2.4e-53 213.0 207 51.2
SGA_v2.0_scaffold15G07326 Striga asiatica HOM05D006615 ORTHO05D007999 4.1e-53 212.2 225 60.4
Pp3c7_15700 Physcomitrium patens HOM05D006615 ORTHO05D007999 7.1e-53 211.5 204 60.8
unitig_748.g8604 Utricularia gibba HOM05D002191 ORTHO05D007999 1.2e-44 184.1 170 54.7
Aqoxy6G01271 Aquilegia oxysepala HOM05D006615 ORTHO05D007999 2.1e-44 183.3 229 54.1
Mapoly0005s0095 Marchantia polymorpha HOM05D006615 ORTHO05D007999 7.8e-44 181.4 220 42.3
AagrBONN_evm.TU.Sc2ySwM_344.5234 Anthoceros agrestis HOM05D006615 ORTHO05D007999 1.5e-39 167.2 206 51.0
TWI73G1298 Tripterygium wilfordii HOM05D006615 ORTHO05D007999 1.6e-33 147.1 139 50.4
SMO164G0246 Selaginella moellendorffii HOM05D006615 ORTHO05D007999 7.6e-31 138.3 131 48.1
Potri.007G045601 Populus trichocarpa HOM05D006615 ORTHO05D007999 2.2e-30 136.7 96 69.8
MSTRG.3434 Avicennia marina HOM05D006615 ORTHO05D007999 3.2e-21 106.3 104 69.2
ClCG02G012330 Citrullus lanatus HOM05D006615 ORTHO05D007999 5.3e-16 89.0 83 53.0
Phvul.008G146300 Phaseolus vulgaris HOM05D006615 ORTHO05D007999 7.4e-10 68.6 45 66.7
EL10Ac6g15726 Beta vulgaris HOM05D006615 ORTHO05D007999 2.0e-07 60.5 160 28.8
Aqoxy4G02446 Aquilegia oxysepala HOM05D001818 ORTHO05D001780 2.6e-07 60.1 80 35.0
AL6G49060 Arabidopsis lyrata HOM05D000710 ORTHO05D000336 6.5e-06 55.5 160 30.6


User provided reference genes

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