Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_010775 Daucus carota HOM05D000321 ORTHO05D000204 1.4e-35 153.3 137 100.0
DCAR_008083 Daucus carota HOM05D000008 ORTHO05D000005 1.1e-32 143.7 72 100.0
DCAR_007867 Daucus carota HOM05D000321 ORTHO05D000204 1.5e-13 80.1 72 61.1
DCAR_003880 Daucus carota HOM05D000321 ORTHO05D000204 5.7e-10 68.2 72 51.4
Rhsim02G0159600 Rhododendron simsii HOM05D000321 ORTHO05D000204 1.3e-09 67.0 59 57.6
QL05p054808 Quercus lobata HOM05D000321 ORTHO05D000204 1.1e-08 63.9 71 52.1
Cfa000887 Carpinus fangiana HOM05D000321 ORTHO05D000204 2.4e-08 62.8 59 54.2
FAN16G2070 Fragaria x ananassa HOM05D000321 ORTHO05D000204 3.1e-08 62.4 60 53.3
vmacro10968 Vaccinium macrocarpon HOM05D000321 ORTHO05D000204 3.1e-08 62.4 59 54.2
AUR62002675 Chenopodium quinoa HOM05D000321 ORTHO05D000204 4.1e-08 62.0 59 55.9
CSS0023032 Camellia sinensis var. sinensis HOM05D000321 ORTHO05D000204 5.4e-08 61.6 53 56.6
CSS0035586 Camellia sinensis var. sinensis HOM05D000321 ORTHO05D000204 5.4e-08 61.6 71 46.5
CSS0042962 Camellia sinensis var. sinensis HOM05D000321 ORTHO05D000204 5.4e-08 61.6 71 46.5
Ah.09g232460 Amaranthus hybridus HOM05D000321 ORTHO05D000204 7.0e-08 61.2 66 51.5
FAN21G1566 Fragaria x ananassa HOM05D000321 ORTHO05D000204 9.1e-08 60.8 59 54.2
Dinv32207 Davidia involucrata HOM05D000321 ORTHO05D000204 1.2e-07 60.5 56 53.6
Hma1.2p1_0586F.1_g183800 Hydrangea macrophylla HOM05D000321 ORTHO05D000204 1.2e-07 60.5 71 46.5
MD10G1257300 Malus domestica HOM05D000321 ORTHO05D000204 1.2e-07 60.5 60 51.7
MD05G1278500 Malus domestica HOM05D000321 ORTHO05D000204 1.6e-07 60.1 60 51.7
Thecc.06G143600 Theobroma cacao HOM05D000321 ORTHO05D000204 1.6e-07 60.1 71 45.1
AUR62030128 Chenopodium quinoa HOM05D000321 ORTHO05D000204 2.0e-07 59.7 64 53.1
AUR62030129 Chenopodium quinoa HOM05D000321 ORTHO05D000204 2.0e-07 59.7 59 54.2
QL05p054856 Quercus lobata HOM05D000321 ORTHO05D000204 2.0e-07 59.7 64 53.1
Hund21553 Selenicereus undatus HOM05D000321 ORTHO05D000204 2.7e-07 59.3 71 49.3
Actinidia39593 Actinidia chinensis HOM05D000321 ORTHO05D000204 3.5e-07 58.9 59 49.2
Haze_05697 Corylus avellana HOM05D000321 ORTHO05D000204 3.5e-07 58.9 72 45.8
Cfa000888 Carpinus fangiana HOM05D000321 ORTHO05D000204 4.5e-07 58.5 60 50.0
FAN25G2542 Fragaria x ananassa HOM05D000321 ORTHO05D000204 4.5e-07 58.5 60 51.7
Lj1A1168T69 Lonicera japonica HOM05D000321 ORTHO05D000204 4.5e-07 58.5 60 51.7
Sc05g0005950 Simmondsia chinensis HOM05D000321 ORTHO05D000204 4.5e-07 58.5 71 47.9
TWI09G0268 Tripterygium wilfordii HOM05D000321 ORTHO05D000204 4.5e-07 58.5 71 45.1
Cc09_g08710 Coffea canephora HOM05D000321 ORTHO05D000204 5.9e-07 58.2 71 46.5
Gorai.010G168400 Gossypium raimondii HOM05D000321 ORTHO05D000204 5.9e-07 58.2 71 46.5
FvH4_3g04980 Fragaria vesca HOM05D000321 ORTHO05D000204 7.7e-07 57.8 60 51.7
FAN11G3273 Fragaria x ananassa HOM05D000321 ORTHO05D000204 7.7e-07 57.8 60 51.7
Gohir.D06G144700 Gossypium hirsutum HOM05D000321 ORTHO05D000204 7.7e-07 57.8 71 46.5
Prupe.4G086300 Prunus persica HOM05D000321 ORTHO05D000204 7.7e-07 57.8 59 49.2
PGR083G0400 Punica granatum HOM05D000321 ORTHO05D000204 1.0e-06 57.4 71 46.5
Actinidia26537 Actinidia chinensis HOM05D000321 ORTHO05D000204 1.3e-06 57.0 60 45.0
Ah.05g177180 Amaranthus hybridus HOM05D000321 ORTHO05D000204 1.3e-06 57.0 59 50.8
Gohir.A06G141300 Gossypium hirsutum HOM05D000321 ORTHO05D000204 1.3e-06 57.0 69 44.9
Lalb_Chr18g0055191 Lupinus albus HOM05D000321 ORTHO05D000204 1.3e-06 57.0 71 45.1
Dinv21514 Davidia involucrata HOM05D000321 ORTHO05D000204 1.7e-06 56.6 71 45.1
CiPaw.09G119100 Carya illinoinensis HOM05D000321 ORTHO05D000204 2.3e-06 56.2 69 44.9
Nn3g20304 Nelumbo nucifera HOM05D000321 ORTHO05D000204 2.9e-06 55.8 50 56.0
GSVIVG01021562001 Vitis vinifera HOM05D000321 ORTHO05D000204 2.9e-06 55.8 59 47.5
AUR62030130 Chenopodium quinoa HOM05D000321 ORTHO05D000204 3.8e-06 55.5 71 45.1
Haze_05698 Corylus avellana HOM05D000321 ORTHO05D000204 3.8e-06 55.5 47 61.7
Manes.17G074400 Manihot esculenta HOM05D000321 ORTHO05D000204 3.8e-06 55.5 71 46.5
COL.COLO4_31003 Corchorus olitorius HOM05D000321 ORTHO05D000204 5.0e-06 55.1 71 43.7
Eucgr.D00261 Eucalyptus grandis HOM05D000321 ORTHO05D000204 6.6e-06 54.7 71 45.1
Lj6g0023540 Lotus japonicus HOM05D000321 ORTHO05D000204 6.6e-06 54.7 71 45.1
TAR627G0929 Trochodendron aralioides HOM05D000321 ORTHO05D000204 6.6e-06 54.7 59 47.5
HPP92_001890 Vanilla planifolia HOM05D000321 ORTHO05D000204 6.6e-06 54.7 59 47.5
TPR.G26231 Trifolium pratense HOM05D000321 ORTHO05D000204 8.6e-06 54.3 71 40.8


User provided reference genes

Program Settings