Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_010731 Daucus carota HOM05D007646 ORTHO05D004022 2.0e-91 339.0 157 100.0
HanXRQChr12g0375971 Helianthus annuus HOM05D007646 ORTHO05D004022 2.7e-40 169.1 164 54.3
Cfa007863 Carpinus fangiana HOM05D007646 ORTHO05D004022 5.2e-39 164.9 149 56.4
Hma1.2p1_0283F.1_g113630 Hydrangea macrophylla HOM05D007646 ORTHO05D004022 6.7e-39 164.5 137 58.4
vmacro05494 Vaccinium macrocarpon HOM05D007646 ORTHO05D004022 8.8e-39 164.1 163 55.8
Prupe.3G151500 Prunus persica HOM05D007646 ORTHO05D004022 1.5e-38 163.3 112 67.0
Rhsim10G0078400 Rhododendron simsii HOM05D007646 ORTHO05D004022 1.5e-38 163.3 108 69.4
Solyc02g063300.3 Solanum lycopersicum HOM05D007646 ORTHO05D004022 2.0e-38 162.9 159 54.1
Sopen02g014370 Solanum pennellii HOM05D007646 ORTHO05D004022 2.0e-38 162.9 159 54.1
Gohir.A07G075950 Gossypium hirsutum HOM05D007646 ORTHO05D004022 3.3e-38 162.2 138 56.5
Gohir.D07G080400 Gossypium hirsutum HOM05D007646 ORTHO05D004022 4.4e-38 161.8 138 56.5
Gorai.001G085500 Gossypium raimondii HOM05D007646 ORTHO05D004022 4.4e-38 161.8 138 56.5
Atru.chr1.1768 Acer truncatum HOM05D007646 ORTHO05D004022 5.7e-38 161.4 114 66.7
Cc07_g08290 Coffea canephora HOM05D007646 ORTHO05D004022 7.4e-38 161.0 161 54.0
Aqoxy3G00145 Aquilegia oxysepala HOM05D007646 ORTHO05D004022 9.7e-38 160.6 144 54.9
Eucgr.F02813 Eucalyptus grandis HOM05D007646 ORTHO05D004022 9.7e-38 160.6 111 68.5
THA.LOC104822453 Tarenaya hassleriana HOM05D007646 ORTHO05D004022 9.7e-38 160.6 117 64.1
VMungo1383G0770 Vigna mungo HOM05D007646 ORTHO05D004022 1.3e-37 160.2 130 61.5
PGSC0003DMG400010412 Solanum tuberosum HOM05D007646 ORTHO05D004022 2.2e-37 159.5 112 67.9
CiPaw.03G067200 Carya illinoinensis HOM05D007646 ORTHO05D004022 2.8e-37 159.1 111 66.7
Migut.L00480 Erythranthe guttata HOM05D007646 ORTHO05D004022 4.8e-37 158.3 166 50.6
TAR629G1988 Trochodendron aralioides HOM05D007646 ORTHO05D004022 4.8e-37 158.3 157 52.2
Aa31LG9G17280 Aethionema arabicum HOM05D004323 ORTHO05D004022 8.2e-37 157.5 156 53.2
Ciclev10013088m.g Citrus clementina HOM05D007646 ORTHO05D004022 2.4e-36 156.0 150 53.3
Haze_14207 Corylus avellana HOM05D007646 ORTHO05D004022 2.4e-36 156.0 130 60.8
Cpa.g.sc116.10 Carica papaya HOM05D007646 ORTHO05D004022 3.1e-36 155.6 110 65.5
Potri.017G122500 Populus trichocarpa HOM05D007646 ORTHO05D004022 3.1e-36 155.6 99 69.7
QL07p035402 Quercus lobata HOM05D007646 ORTHO05D004022 3.1e-36 155.6 118 61.9
TPR.G28547 Trifolium pratense HOM05D007646 ORTHO05D004022 4.1e-36 155.2 114 64.0
TWI77G0633 Tripterygium wilfordii HOM05D007646 ORTHO05D004022 4.1e-36 155.2 117 65.0
Glyma.02G091100 Glycine max HOM05D007646 ORTHO05D004022 5.3e-36 154.8 115 63.5
Manes.01G114800 Manihot esculenta HOM05D007646 ORTHO05D004022 5.3e-36 154.8 137 56.2
Manes.02G073800 Manihot esculenta HOM05D007646 ORTHO05D004022 5.3e-36 154.8 119 63.0
Thhalv10027987m.g Eutrema salsugineum HOM05D007646 ORTHO05D004022 7.0e-36 154.5 119 61.3
FvH4_4g24890 Fragaria vesca HOM05D007646 ORTHO05D004022 7.0e-36 154.5 125 60.0
FAN07G2610 Fragaria x ananassa HOM05D007646 ORTHO05D004022 7.0e-36 154.5 125 60.0
FAN17G0138 Fragaria x ananassa HOM05D007646 ORTHO05D004022 7.0e-36 154.5 125 60.0
Phvul.008G009900 Phaseolus vulgaris HOM05D007646 ORTHO05D004022 7.0e-36 154.5 122 61.5
Sed0004781 Sechium edule HOM05D007646 ORTHO05D004022 7.0e-36 154.5 119 63.9
GSVIVG01030896001 Vitis vinifera HOM05D007646 ORTHO05D004022 9.1e-36 154.1 115 63.5
Duzib133G1094 Durio zibethinus HOM05D007646 ORTHO05D004022 1.2e-35 153.7 108 64.8
Lj1g0016280 Lotus japonicus HOM05D007646 ORTHO05D004022 1.2e-35 153.7 112 64.3
FAN12G1679 Fragaria x ananassa HOM05D007646 ORTHO05D004022 1.6e-35 153.3 125 59.2
MSTRG.3534 Avicennia marina HOM05D007646 ORTHO05D004022 2.0e-35 152.9 157 50.3
Thecc.04G124000 Theobroma cacao HOM05D007646 ORTHO05D004022 2.0e-35 152.9 108 63.0
Lsat_1_v5_gn_3_83021 Lactuca sativa HOM05D007646 ORTHO05D004022 2.6e-35 152.5 160 52.5
BcaB02g08021 Brassica carinata HOM05D007646 ORTHO05D004022 3.5e-35 152.1 135 57.0
ClCG05G010760 Citrullus lanatus HOM05D007646 ORTHO05D004022 3.5e-35 152.1 117 62.4
arahy.Tifrunner.gnm1.ann1.27TPXA Arachis hypogaea HOM05D007646 ORTHO05D004022 4.5e-35 151.8 116 62.1
arahy.Tifrunner.gnm1.ann1.FGX6FG Arachis hypogaea HOM05D007646 ORTHO05D004022 4.5e-35 151.8 116 62.1
RcHm_v2.0_Chr3g0493581 Rosa chinensis HOM05D007646 ORTHO05D004022 4.5e-35 151.8 133 59.4
Carub.0005s1235 Capsella rubella HOM05D007646 ORTHO05D004022 5.9e-35 151.4 149 49.7
Hund13692 Selenicereus undatus HOM05D007646 ORTHO05D004022 5.9e-35 151.4 151 52.3
Lalb_Chr10g0091581 Lupinus albus HOM05D007646 ORTHO05D004022 2.2e-34 149.4 136 55.9
Psat3g096480 Pisum sativum HOM05D007646 ORTHO05D004022 2.2e-34 149.4 113 62.8
AL7G52880 Arabidopsis lyrata HOM05D007646 ORTHO05D004022 3.8e-34 148.7 111 60.4
AT5G38060 Arabidopsis thaliana HOM05D007646 ORTHO05D004022 3.8e-34 148.7 105 63.8
SGA_v2.0_scaffold329G48872 Striga asiatica HOM05D007646 ORTHO05D004022 3.8e-34 148.7 110 63.6
BcaC08g44354 Brassica carinata HOM05D007646 ORTHO05D004022 5.0e-34 148.3 110 61.8
CDE06G1656 Ceratophyllum demersum HOM05D007646 ORTHO05D004022 6.5e-34 147.9 117 61.5
Sp7g04020 Schrenkiella parvula HOM05D007646 ORTHO05D004022 6.5e-34 147.9 146 54.8
A07p19560 Brassica napus HOM05D007646 ORTHO05D004022 8.5e-34 147.5 128 56.2
Sc11g0008560 Simmondsia chinensis HOM05D007646 ORTHO05D004022 8.5e-34 147.5 117 58.1
EL10Ac2g04503 Beta vulgaris HOM05D007646 ORTHO05D004022 1.1e-33 147.1 165 49.1
ATR0326G025 Amborella trichopoda HOM05D007646 ORTHO05D004022 1.9e-33 146.4 149 51.0
CANSAT54G0187 Cannabis sativa HOM05D007646 ORTHO05D004022 1.9e-33 146.4 113 62.8
BraA07t29660Z Brassica rapa HOM05D007646 ORTHO05D004022 3.2e-33 145.6 121 57.0
PSO478G0345 Papaver somniferum HOM05D007646 ORTHO05D004022 3.2e-33 145.6 150 52.7
BolC6t36994H Brassica oleracea HOM05D007646 ORTHO05D004022 4.2e-33 145.2 110 60.0
SEGI_34374 Sequoiadendron giganteum HOM05D007646 ORTHO05D004022 7.2e-33 144.4 113 59.3
HPP92_011530 Vanilla planifolia HOM05D007646 ORTHO05D004022 7.2e-33 144.4 96 65.6
Zm00001eb042800 Zea mays HOM05D007646 ORTHO05D004022 1.6e-32 143.3 97 66.0
CARHR214680 Cardamine hirsuta HOM05D007646 ORTHO05D004022 2.7e-32 142.5 105 59.0
Nitab4.5_0000036g0620 Nicotiana tabacum HOM05D007646 ORTHO05D004022 2.7e-32 142.5 159 50.3
PSO017G6311 Papaver somniferum HOM05D007646 ORTHO05D004022 6.1e-32 141.4 152 52.6
Os08g0364500 Oryza sativa ssp. japonica HOM05D007646 ORTHO05D004022 1.0e-31 140.6 97 63.9
Sabra17G0101300 Salix brachista HOM05D007646 ORTHO05D004022 1.0e-31 140.6 194 41.2
Sabra17G0103900 Salix brachista HOM05D007646 ORTHO05D004022 1.4e-31 140.2 198 40.4
Medtr7g082970 Medicago truncatula HOM05D007646 ORTHO05D004022 1.8e-31 139.8 171 43.9
C06p17970 Brassica napus HOM05D007646 ORTHO05D004022 2.3e-31 139.4 122 54.1
Pp3c20_8520 Physcomitrium patens HOM05D007646 ORTHO05D004022 1.5e-30 136.7 144 50.0
COL.COLO4_27123 Corchorus olitorius HOM05D003498 ORTHO05D004191 4.4e-30 135.2 102 60.8
Mapoly0026s0130 Marchantia polymorpha HOM05D007646 ORTHO05D004022 3.7e-29 132.1 104 56.7
SMO270G0036 Selaginella moellendorffii HOM05D007646 ORTHO05D004022 1.6e-27 126.7 97 58.8
AagrBONN_evm.TU.Sc2ySwM_117.3189 Anthoceros agrestis HOM05D007646 ORTHO05D004022 7.7e-27 124.4 102 55.9
CBR_g4014 Chara braunii HOM05D007646 ORTHO05D004022 1.3e-26 123.6 119 52.1
CsaV3_3G017630 Cucumis sativus L. HOM05D007646 ORTHO05D004022 4.0e-23 112.1 52 88.5
CSS0015077 Camellia sinensis var. sinensis HOM05D007646 ORTHO05D004022 2.0e-22 109.8 51 90.2
MBI10_g07293_MAGBIO Magnolia biondii HOM05D007646 ORTHO05D004022 4.4e-22 108.6 54 85.2
Peaxi162Scf00343g00059 Petunia axillaris HOM05D007646 ORTHO05D004022 4.4e-22 108.6 51 88.2
Ah.16g101400 Amaranthus hybridus HOM05D007646 ORTHO05D004022 3.1e-20 102.4 52 78.8
Nn4g24089 Nelumbo nucifera HOM05D007646 ORTHO05D004022 3.3e-17 92.4 104 46.2
MELO3C020311.2 Cucumis melo HOM05D007646 ORTHO05D004022 1.2e-11 73.9 79 48.1
ECA246G1632 Erigeron canadensis HOM05D007646 ORTHO05D004022 2.3e-10 69.7 34 73.5
Nn3g18065 Nelumbo nucifera HOM05D007646 ORTHO05D004022 6.6e-10 68.2 90 46.7
PGR042G1372 Punica granatum HOM05D007710 ORTHO05D004022 2.5e-09 66.2 98 36.7
Eucgr.A02986 Eucalyptus grandis HOM05D007710 ORTHO05D004022 9.5e-09 64.3 106 30.2
Actinidia08760 Actinidia chinensis HOM05D007710 ORTHO05D004022 1.2e-08 63.9 96 35.4
Sp5g19360 Schrenkiella parvula HOM05D007710 ORTHO05D004022 1.2e-08 63.9 102 34.3
unitig_748.g8495 Utricularia gibba HOM05D007646 ORTHO05D004022 2.1e-08 63.2 66 48.5
DCAR_009023 Daucus carota HOM05D007710 ORTHO05D004022 2.8e-08 62.8 95 35.8
EL10Ac3g05053 Beta vulgaris HOM05D007710 ORTHO05D004022 3.6e-08 62.4 95 34.7
BcaB03g15335 Brassica carinata HOM05D007710 ORTHO05D004022 4.7e-08 62.0 102 33.3
CSS0005120 Camellia sinensis var. sinensis HOM05D007710 ORTHO05D004022 4.7e-08 62.0 95 35.8
CSS0038916 Camellia sinensis var. sinensis HOM05D007710 ORTHO05D004022 4.7e-08 62.0 95 35.8
Cc02_g00160 Coffea canephora HOM05D007710 ORTHO05D004022 4.7e-08 62.0 95 33.7
Aqoxy3G02299 Aquilegia oxysepala HOM05D007710 ORTHO05D004022 8.0e-08 61.2 102 33.3
AL2G19620 Arabidopsis lyrata HOM05D007710 ORTHO05D004022 8.0e-08 61.2 99 34.3
Glyma.12G016700 Glycine max HOM05D007710 ORTHO05D004022 8.0e-08 61.2 95 34.7
arahy.Tifrunner.gnm1.ann1.GY8AT6 Arachis hypogaea HOM05D007710 ORTHO05D004022 1.0e-07 60.8 98 37.8
arahy.Tifrunner.gnm1.ann1.U0IDC3 Arachis hypogaea HOM05D007710 ORTHO05D004022 1.0e-07 60.8 98 37.8
CARHR056450 Cardamine hirsuta HOM05D007710 ORTHO05D004022 1.0e-07 60.8 95 32.6
Nitab4.5_0000021g0800 Nicotiana tabacum HOM05D007710 ORTHO05D004022 1.0e-07 60.8 95 33.7
A07p32740 Brassica napus HOM05D007710 ORTHO05D004022 1.4e-07 60.5 99 33.3
BraA07t30900Z Brassica rapa HOM05D007710 ORTHO05D004022 1.4e-07 60.5 96 33.3
Lsat_1_v5_gn_2_60801 Lactuca sativa HOM05D007710 ORTHO05D004022 1.4e-07 60.5 93 37.6
Prupe.2G328300 Prunus persica HOM05D007710 ORTHO05D004022 1.4e-07 60.5 95 36.8
SMO347G0449 Selaginella moellendorffii HOM05D007710 ORTHO05D004022 1.4e-07 60.5 95 32.6
unitig_747.g21335 Utricularia gibba HOM05D007710 ORTHO05D004022 1.4e-07 60.5 98 33.7
Aa31LG2G2200 Aethionema arabicum HOM05D007710 ORTHO05D004022 1.8e-07 60.1 99 32.3
AUR62028202 Chenopodium quinoa HOM05D007710 ORTHO05D004022 1.8e-07 60.1 98 32.7
Pp3c5_4790 Physcomitrium patens HOM05D007710 ORTHO05D004022 1.8e-07 60.1 96 32.3
TPR.G19627 Trifolium pratense HOM05D007710 ORTHO05D004022 1.8e-07 60.1 103 32.0
CARHR057330 Cardamine hirsuta HOM05D007710 ORTHO05D004022 2.3e-07 59.7 101 32.7
Cfa016067 Carpinus fangiana HOM05D003442 ORTHO05D004005 2.3e-07 59.7 117 33.3
CiPaw.06G035400 Carya illinoinensis HOM05D007710 ORTHO05D004022 2.3e-07 59.7 95 36.8
ECA233G0318 Erigeron canadensis HOM05D007710 ORTHO05D004022 2.3e-07 59.7 114 30.7
Nitab4.5_0004530g0090 Nicotiana tabacum HOM05D007710 ORTHO05D004022 2.3e-07 59.7 95 32.6
RcHm_v2.0_Chr1g0384511 Rosa chinensis HOM05D007710 ORTHO05D004022 2.3e-07 59.7 101 32.7
GSVIVG01024345001 Vitis vinifera HOM05D007710 ORTHO05D004022 3.0e-07 59.3 95 36.8
Haze_00383 Corylus avellana HOM05D007710 ORTHO05D004022 4.0e-07 58.9 95 36.8
Gohir.A13G101700 Gossypium hirsutum HOM05D007710 ORTHO05D004022 4.0e-07 58.9 98 33.7
Phvul.011G019000 Phaseolus vulgaris HOM05D007710 ORTHO05D004022 4.0e-07 58.9 95 32.6
BolC6t38987H Brassica oleracea HOM05D007710 ORTHO05D004022 5.2e-07 58.5 97 36.1
Duzib128G0150 Durio zibethinus HOM05D007710 ORTHO05D004022 5.2e-07 58.5 98 33.7
FvH4_7g34150 Fragaria vesca HOM05D007710 ORTHO05D004022 5.2e-07 58.5 95 32.6
Hund09805 Selenicereus undatus HOM05D007710 ORTHO05D004022 6.8e-07 58.2 95 34.7
TWI32G0404 Tripterygium wilfordii HOM05D007710 ORTHO05D004022 6.8e-07 58.2 98 36.7
Ah.04g156350 Amaranthus hybridus HOM05D007710 ORTHO05D004022 8.9e-07 57.8 137 31.4
THA.LOC104805715 Tarenaya hassleriana HOM05D007710 ORTHO05D004022 8.9e-07 57.8 101 35.6
TAR375G0377 Trochodendron aralioides HOM05D007710 ORTHO05D004022 8.9e-07 57.8 96 33.3
AT1G65000 Arabidopsis thaliana HOM05D007710 ORTHO05D004022 1.2e-06 57.4 99 32.3
C06p38950 Brassica napus HOM05D007710 ORTHO05D004022 1.5e-06 57.0 96 33.3
FAN03G2015 Fragaria x ananassa HOM05D007710 ORTHO05D004022 2.0e-06 56.6 95 31.6
Potri.013G078866 Populus trichocarpa HOM05D007710 ORTHO05D004022 2.0e-06 56.6 102 33.3
Lj3g0011322 Lotus japonicus HOM05D007710 ORTHO05D004022 2.6e-06 56.2 95 36.8
PGSC0003DMG400003164 Solanum tuberosum HOM05D007710 ORTHO05D004022 2.6e-06 56.2 95 32.6
PGSC0003DMG402026486 Solanum tuberosum HOM05D007710 ORTHO05D004022 2.6e-06 56.2 95 32.6
Atru.chr12.1914 Acer truncatum HOM05D007710 ORTHO05D004022 3.4e-06 55.8 98 32.7
CAN.G1131.30 Capsicum annuum HOM05D007710 ORTHO05D004022 4.4e-06 55.5 95 31.6
Mapoly0120s0048 Marchantia polymorpha HOM05D007710 ORTHO05D004022 4.4e-06 55.5 95 34.7
PSO063G4155 Papaver somniferum HOM05D007710 ORTHO05D004022 4.4e-06 55.5 96 32.3
ATR0057G097 Amborella trichopoda HOM05D007710 ORTHO05D004022 5.8e-06 55.1 96 33.3
Hma1.2p1_0649F.1_g195220 Hydrangea macrophylla HOM05D007710 ORTHO05D004022 5.8e-06 55.1 93 34.4
Medtr4g478210 Medicago truncatula HOM05D007710 ORTHO05D004022 5.8e-06 55.1 93 32.3
PSO782G0287 Papaver somniferum HOM05D007710 ORTHO05D004022 7.5e-06 54.7 96 31.2
Solyc03g097200.3 Solanum lycopersicum HOM05D007710 ORTHO05D004022 7.5e-06 54.7 95 31.6
Sopen03g027960 Solanum pennellii HOM05D007710 ORTHO05D004022 7.5e-06 54.7 95 31.6
HPP92_014617 Vanilla planifolia HOM05D007710 ORTHO05D004022 7.5e-06 54.7 98 31.6
Thecc.05G219200 Theobroma cacao HOM05D007710 ORTHO05D004022 9.8e-06 54.3 98 32.7


User provided reference genes

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