Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_010648 Daucus carota HOM05D001976 ORTHO05D001960 1.7e-103 379.4 204 100.0
DCAR_014525 Daucus carota HOM05D001976 ORTHO05D001960 9.1e-28 127.9 198 49.5
Actinidia31851 Actinidia chinensis HOM05D001976 ORTHO05D001960 1.2e-14 84.3 267 34.8
DCAR_020285 Daucus carota HOM05D001976 ORTHO05D001960 7.5e-14 81.6 295 31.2
Actinidia08600 Actinidia chinensis HOM05D001976 ORTHO05D001960 2.4e-12 76.6 250 33.6
CAN.G926.1 Capsicum annuum HOM05D001976 ORTHO05D001960 1.2e-11 74.3 236 33.9
ECA238G2726 Erigeron canadensis HOM05D001976 ORTHO05D001960 1.2e-11 74.3 218 36.2
Lj3A916T19 Lonicera japonica HOM05D001976 ORTHO05D001960 1.2e-11 74.3 113 46.9
Lj1A1009T50 Lonicera japonica HOM05D001976 ORTHO05D001960 1.7e-10 70.5 197 36.5
Sopen03g003640 Solanum pennellii HOM05D001976 ORTHO05D001960 5.0e-10 68.9 141 39.0
Gorai.003G070400 Gossypium raimondii HOM05D001976 ORTHO05D001960 6.5e-10 68.6 199 34.2
Thecc.03G187800 Theobroma cacao HOM05D001976 ORTHO05D001960 1.1e-09 67.8 214 34.1
CiPaw.06G005400 Carya illinoinensis HOM05D001976 ORTHO05D001960 1.5e-09 67.4 132 43.2
MD07G1281700 Malus domestica HOM05D001976 ORTHO05D001960 1.9e-09 67.0 60 63.3
Actinidia03149 Actinidia chinensis HOM05D001976 ORTHO05D001960 3.2e-09 66.2 240 33.3
FAN18G1913 Fragaria x ananassa HOM05D001976 ORTHO05D001960 5.5e-09 65.5 77 54.5
FAN18G1918 Fragaria x ananassa HOM05D001976 ORTHO05D001960 5.5e-09 65.5 77 54.5
Dinv28365 Davidia involucrata HOM05D001976 ORTHO05D001960 7.2e-09 65.1 232 31.5
Dinv35286 Davidia involucrata HOM05D001976 ORTHO05D001960 7.2e-09 65.1 227 33.9
RcHm_v2.0_Chr1g0379481 Rosa chinensis HOM05D001976 ORTHO05D001960 7.2e-09 65.1 205 33.2
Sed0005793 Sechium edule HOM05D001976 ORTHO05D001960 9.4e-09 64.7 64 60.9
FAN10G1896 Fragaria x ananassa HOM05D001976 ORTHO05D001960 1.2e-08 64.3 212 32.5
Hma1.2p1_0327F.1_g126540 Hydrangea macrophylla HOM05D001976 ORTHO05D001960 1.2e-08 64.3 63 58.7
MD01G1211000 Malus domestica HOM05D001976 ORTHO05D001960 1.2e-08 64.3 60 61.7
Peaxi162Scf00057g00006 Petunia axillaris HOM05D001976 ORTHO05D001960 1.2e-08 64.3 310 30.6
Actinidia34172 Actinidia chinensis HOM05D001976 ORTHO05D001960 2.7e-08 63.2 246 32.1
FvH4_5g03470 Fragaria vesca HOM05D001976 ORTHO05D001960 2.7e-08 63.2 77 53.2
Dinv37579 Davidia involucrata HOM05D001976 ORTHO05D001960 3.6e-08 62.8 62 59.7
FAN04G0634 Fragaria x ananassa HOM05D001976 ORTHO05D001960 3.6e-08 62.8 62 59.7
FAN08G2781 Fragaria x ananassa HOM05D001976 ORTHO05D001960 3.6e-08 62.8 62 59.7
FAN13G2994 Fragaria x ananassa HOM05D001976 ORTHO05D001960 3.6e-08 62.8 62 59.7
ClCG07G007760 Citrullus lanatus HOM05D001976 ORTHO05D001960 4.7e-08 62.4 63 60.3
FAN10G3017 Fragaria x ananassa HOM05D001976 ORTHO05D001960 4.7e-08 62.4 212 32.1
HanXRQChr14g0462631 Helianthus annuus HOM05D001976 ORTHO05D001960 4.7e-08 62.4 147 39.5
QL09p012141 Quercus lobata HOM05D001976 ORTHO05D001960 4.7e-08 62.4 142 39.4
Solyc03g007720.3 Solanum lycopersicum HOM05D001976 ORTHO05D001960 4.7e-08 62.4 107 42.1
Sopen03g003650 Solanum pennellii HOM05D001976 ORTHO05D001960 4.7e-08 62.4 107 42.1
MELO3C016332.2 Cucumis melo HOM05D001976 ORTHO05D001960 6.1e-08 62.0 71 56.3
CsaV3_4G006180 Cucumis sativus L. HOM05D001976 ORTHO05D001960 6.1e-08 62.0 79 51.9
Nitab4.5_0000472g0360 Nicotiana tabacum HOM05D001976 ORTHO05D001960 6.1e-08 62.0 243 30.9
Gorai.004G116800 Gossypium raimondii HOM05D001976 ORTHO05D001960 8.0e-08 61.6 169 36.7
Peaxi162Scf00057g00023 Petunia axillaris HOM05D001976 ORTHO05D001960 8.0e-08 61.6 167 37.7
TAR629G3496 Trochodendron aralioides HOM05D001976 ORTHO05D001960 8.0e-08 61.6 62 58.1
Prupe.2G303400 Prunus persica HOM05D001976 ORTHO05D001960 1.0e-07 61.2 58 60.3
Thecc.03G288300 Theobroma cacao HOM05D001976 ORTHO05D001960 1.0e-07 61.2 72 54.2
FAN04G1876 Fragaria x ananassa HOM05D001976 ORTHO05D001960 1.4e-07 60.8 62 58.1
FAN06G3812 Fragaria x ananassa HOM05D001976 ORTHO05D001960 1.4e-07 60.8 146 37.7
FAN06G3899 Fragaria x ananassa HOM05D001976 ORTHO05D001960 1.4e-07 60.8 146 37.7
Gohir.A08G085300 Gossypium hirsutum HOM05D001976 ORTHO05D001960 1.4e-07 60.8 170 37.1
Lsat_1_v5_gn_2_133481 Lactuca sativa HOM05D001976 ORTHO05D001960 1.4e-07 60.8 172 35.5
Solyc03g007710.3 Solanum lycopersicum HOM05D001976 ORTHO05D001960 1.4e-07 60.8 171 34.5
Duzib205G1380 Durio zibethinus HOM05D001976 ORTHO05D001960 1.8e-07 60.5 72 51.4
FvH4_7g30580 Fragaria vesca HOM05D001976 ORTHO05D001960 1.8e-07 60.5 212 31.6
Hund11428 Selenicereus undatus HOM05D001976 ORTHO05D001960 1.8e-07 60.5 122 39.3
FAN13G0870 Fragaria x ananassa HOM05D001976 ORTHO05D001960 2.3e-07 60.1 62 58.1
Nitab4.5_0010456g0010 Nicotiana tabacum HOM05D001976 ORTHO05D001960 2.3e-07 60.1 62 53.2
Sed0022791 Sechium edule HOM05D001976 ORTHO05D001960 2.3e-07 60.1 157 33.1
CSS0011463 Camellia sinensis var. sinensis HOM05D001976 ORTHO05D001960 3.0e-07 59.7 73 53.4
CSS0015961 Camellia sinensis var. sinensis HOM05D001976 ORTHO05D001960 3.0e-07 59.7 73 53.4
Cfa016322 Carpinus fangiana HOM05D001976 ORTHO05D001960 3.0e-07 59.7 122 38.5
Duzib205G1678 Durio zibethinus HOM05D001976 ORTHO05D001960 3.0e-07 59.7 133 36.8
Gohir.D08G109000 Gossypium hirsutum HOM05D001976 ORTHO05D001960 3.0e-07 59.7 169 35.5
Hma1.2p1_0216F.1_g091200 Hydrangea macrophylla HOM05D001976 ORTHO05D001960 4.0e-07 59.3 74 52.7
Manes.02G015825 Manihot esculenta HOM05D001976 ORTHO05D001960 4.0e-07 59.3 64 57.8
Sed0023286 Sechium edule HOM05D001976 ORTHO05D001960 4.0e-07 59.3 177 33.9
FAN01G1225 Fragaria x ananassa HOM05D001976 ORTHO05D001960 5.2e-07 58.9 210 31.4
Lj2P176T17 Lonicera japonica HOM05D001976 ORTHO05D001960 5.2e-07 58.9 60 60.0
MSTRG.8694 Avicennia marina HOM05D001976 ORTHO05D001960 6.8e-07 58.5 298 28.9
Ciclev10020100m.g Citrus clementina HOM05D001976 ORTHO05D001960 6.8e-07 58.5 120 38.3
COL.COLO4_30264 Corchorus olitorius HOM05D001976 ORTHO05D001960 6.8e-07 58.5 215 32.1
Duzib084G1151 Durio zibethinus HOM05D001976 ORTHO05D001960 8.8e-07 58.2 124 42.7
Nitab4.5_0015034g0010 Nicotiana tabacum HOM05D001976 ORTHO05D001960 8.8e-07 58.2 247 31.6
arahy.Tifrunner.gnm1.ann1.0FHV4T Arachis hypogaea HOM05D001976 ORTHO05D001960 1.5e-06 57.4 97 43.3
PGSC0003DMG400020889 Solanum tuberosum HOM05D001976 ORTHO05D001960 1.5e-06 57.4 179 34.6
TAR374G0991 Trochodendron aralioides HOM05D001976 ORTHO05D001960 1.5e-06 57.4 118 38.1
CANSAT21G0977 Cannabis sativa HOM05D001976 ORTHO05D001960 2.0e-06 57.0 159 37.7
Manes.06G154200 Manihot esculenta HOM05D001976 ORTHO05D001960 2.0e-06 57.0 67 61.2
Manes.14G121828 Manihot esculenta HOM05D001976 ORTHO05D001960 2.0e-06 57.0 64 56.2
GSVIVG01019432001 Vitis vinifera HOM05D001976 ORTHO05D001960 2.0e-06 57.0 72 54.2
CiPaw.11G127900 Carya illinoinensis HOM05D001976 ORTHO05D001960 2.6e-06 56.6 73 50.7
Duzib068G0824 Durio zibethinus HOM05D001976 ORTHO05D001960 2.6e-06 56.6 68 54.4
Sed0014014 Sechium edule HOM05D001976 ORTHO05D001960 2.6e-06 56.6 68 48.5
Atru.chr9.2097 Acer truncatum HOM05D001976 ORTHO05D001960 3.4e-06 56.2 119 35.3
PGSC0003DMG400020890 Solanum tuberosum HOM05D001976 ORTHO05D001960 3.4e-06 56.2 203 33.5
MSTRG.27068 Avicennia marina HOM05D001976 ORTHO05D001960 4.4e-06 55.8 191 34.0
Cc08_g15410 Coffea canephora HOM05D001976 ORTHO05D001960 4.4e-06 55.8 53 60.4
Nitab4.5_0006643g0020 Nicotiana tabacum HOM05D001976 ORTHO05D001960 4.4e-06 55.8 311 29.3
Actinidia27357 Actinidia chinensis HOM05D001976 ORTHO05D001960 5.7e-06 55.5 59 57.6
CsaV3_5G000980 Cucumis sativus L. HOM05D001976 ORTHO05D001960 5.7e-06 55.5 65 52.3
MBI07_g11737_MAGBIO Magnolia biondii HOM05D001976 ORTHO05D001960 5.7e-06 55.5 60 56.7
Nn7g37309 Nelumbo nucifera HOM05D001976 ORTHO05D001960 5.7e-06 55.5 62 54.8
Nitab4.5_0000472g0370 Nicotiana tabacum HOM05D001976 ORTHO05D001960 5.7e-06 55.5 69 50.7
Prupe.5G110000 Prunus persica HOM05D001976 ORTHO05D001960 5.7e-06 55.5 64 54.7
Sed0000465 Sechium edule HOM05D001976 ORTHO05D001960 5.7e-06 55.5 63 55.6
SGA_v2.0_scaffold44G16760 Striga asiatica HOM05D001976 ORTHO05D001960 5.7e-06 55.5 105 40.0
Cfa012260 Carpinus fangiana HOM05D001976 ORTHO05D001960 7.5e-06 55.1 67 55.2
Haze_08732 Corylus avellana HOM05D001976 ORTHO05D001960 7.5e-06 55.1 67 55.2
Gohir.A12G254565 Gossypium hirsutum HOM05D001976 ORTHO05D001960 7.5e-06 55.1 196 32.7
HanXRQChr15g0493361 Helianthus annuus HOM05D001976 ORTHO05D001960 7.5e-06 55.1 265 31.3
Lalb_Chr06g0161391 Lupinus albus HOM05D001976 ORTHO05D001960 7.5e-06 55.1 178 35.4
Oeu040007.1 Olea europaea HOM05D001976 ORTHO05D001960 7.5e-06 55.1 54 63.0
PSO170G5045 Papaver somniferum HOM05D001976 ORTHO05D001960 7.5e-06 55.1 63 50.8
TWI81G0614 Tripterygium wilfordii HOM05D001976 ORTHO05D001960 7.5e-06 55.1 63 55.6
Atru.ctg97_1.53 Acer truncatum HOM05D001976 ORTHO05D001960 9.8e-06 54.7 60 60.0
CsaV3_3G017620 Cucumis sativus L. HOM05D001976 ORTHO05D001960 9.8e-06 54.7 183 31.1
Lalb_Chr02g0141301 Lupinus albus HOM05D001976 ORTHO05D001960 9.8e-06 54.7 60 53.3
Medtr1g099550 Medicago truncatula HOM05D001976 ORTHO05D001960 9.8e-06 54.7 58 56.9
Rhsim02G0236700 Rhododendron simsii HOM05D001976 ORTHO05D001960 9.8e-06 54.7 64 53.1


User provided reference genes

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