Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_010586 Daucus carota HOM05D006088 ORTHO05D007281 5.6e-138 494.2 239 100.0
DCAR_014551 Daucus carota HOM05D006088 ORTHO05D007281 4.0e-83 312.0 236 65.3
Dinv29251 Davidia involucrata HOM05D006088 ORTHO05D007281 8.9e-83 310.8 236 64.0
CSS0005298 Camellia sinensis var. sinensis HOM05D006088 ORTHO05D007281 3.4e-82 308.9 238 63.0
CSS0044490 Camellia sinensis var. sinensis HOM05D006088 ORTHO05D007281 1.7e-81 306.6 236 63.1
Hma1.2p1_0707F.1_g207070 Hydrangea macrophylla HOM05D006088 ORTHO05D007281 1.1e-80 303.9 238 60.9
Actinidia34240 Actinidia chinensis HOM05D006088 ORTHO05D007281 1.4e-80 303.5 236 61.9
Lj1A1022T49 Lonicera japonica HOM05D006088 ORTHO05D007281 4.1e-80 302.0 236 62.7
HanXRQChr04g0100451 Helianthus annuus HOM05D006088 ORTHO05D007281 7.0e-80 301.2 236 60.2
Rhsim03G0211500 Rhododendron simsii HOM05D006088 ORTHO05D007281 1.0e-78 297.4 236 61.0
SGA_v2.0_scaffold44G16827 Striga asiatica HOM05D006088 ORTHO05D007281 1.0e-78 297.4 236 61.0
Potri.015G009500 Populus trichocarpa HOM05D006088 ORTHO05D007281 8.6e-78 294.3 236 59.7
TAR629G2736 Trochodendron aralioides HOM05D006088 ORTHO05D007281 1.9e-77 293.1 236 60.6
ECA238G4490 Erigeron canadensis HOM05D006088 ORTHO05D007281 2.5e-77 292.7 236 58.9
QL09p007776 Quercus lobata HOM05D006088 ORTHO05D007281 3.3e-77 292.4 236 59.7
Oeu037044.1 Olea europaea HOM05D006088 ORTHO05D007281 4.3e-77 292.0 236 60.2
PSO063G3091 Papaver somniferum HOM05D006088 ORTHO05D007281 5.6e-77 291.6 236 59.7
Migut.F00188 Erythranthe guttata HOM05D006088 ORTHO05D007281 9.5e-77 290.8 237 57.8
Gorai.006G202600 Gossypium raimondii HOM05D006088 ORTHO05D007281 1.2e-76 290.4 238 58.4
Gohir.D09G180600 Gossypium hirsutum HOM05D006088 ORTHO05D007281 1.6e-76 290.0 236 58.5
CAN.G481.44 Capsicum annuum HOM05D006088 ORTHO05D007281 3.6e-76 288.9 236 58.9
Solyc03g082850.3 Solanum lycopersicum HOM05D006088 ORTHO05D007281 3.6e-76 288.9 236 59.3
Sopen03g022590 Solanum pennellii HOM05D006088 ORTHO05D007281 3.6e-76 288.9 236 59.3
Gohir.A09G186501 Gossypium hirsutum HOM05D006088 ORTHO05D007281 8.0e-76 287.7 236 58.5
Peaxi162Scf00740g00327 Petunia axillaris HOM05D006088 ORTHO05D007281 8.0e-76 287.7 237 58.2
Sc25g0000960 Simmondsia chinensis HOM05D006088 ORTHO05D007281 8.0e-76 287.7 236 59.7
Nn1g00333 Nelumbo nucifera HOM05D006088 ORTHO05D007281 1.0e-75 287.3 236 58.1
PGSC0003DMG400018542 Solanum tuberosum HOM05D006088 ORTHO05D007281 1.4e-75 287.0 236 58.9
Prupe.2G314700 Prunus persica HOM05D006088 ORTHO05D007281 1.8e-75 286.6 236 59.7
Sabra15G0007500 Salix brachista HOM05D006088 ORTHO05D007281 1.8e-75 286.6 236 58.1
SalBow4G2097 Salvia bowleyana HOM05D006088 ORTHO05D007281 1.8e-75 286.6 236 59.3
Duzib068G0049 Durio zibethinus HOM05D006088 ORTHO05D007281 2.3e-75 286.2 237 59.1
GSVIVG01038590001 Vitis vinifera HOM05D006088 ORTHO05D007281 3.0e-75 285.8 236 59.7
COL.COLO4_16809 Corchorus olitorius HOM05D006088 ORTHO05D007281 4.0e-75 285.4 237 58.6
Atru.chr12.2268 Acer truncatum HOM05D006088 ORTHO05D007281 8.9e-75 284.3 236 58.5
MSTRG.27009 Avicennia marina HOM05D006088 ORTHO05D007281 2.0e-74 283.1 236 58.5
AUR62035569 Chenopodium quinoa HOM05D006088 ORTHO05D007281 2.6e-74 282.7 236 58.5
Nitab4.5_0002780g0060 Nicotiana tabacum HOM05D006088 ORTHO05D007281 3.4e-74 282.3 236 58.5
Cpa.g.sc3.114 Carica papaya HOM05D006088 ORTHO05D007281 4.4e-74 282.0 236 58.5
Cc02_g01220 Coffea canephora HOM05D006088 ORTHO05D007281 4.4e-74 282.0 236 58.9
Atru.chr12.2276 Acer truncatum HOM05D006088 ORTHO05D007281 7.5e-74 281.2 236 58.1
PGR042G2967 Punica granatum HOM05D006088 ORTHO05D007281 7.5e-74 281.2 236 58.5
vmacro06403 Vaccinium macrocarpon HOM05D006088 ORTHO05D007281 9.8e-74 280.8 237 58.2
AUR62006059 Chenopodium quinoa HOM05D006088 ORTHO05D007281 1.3e-73 280.4 236 58.1
vmacro06404 Vaccinium macrocarpon HOM05D006088 ORTHO05D007281 1.3e-73 280.4 279 52.0
Eucgr.A01442 Eucalyptus grandis HOM05D006088 ORTHO05D007281 2.2e-73 279.6 236 57.6
MBI12_g21748_MAGBIO Magnolia biondii HOM05D006088 ORTHO05D007281 2.2e-73 279.6 236 55.9
EL10Ac3g05241 Beta vulgaris HOM05D006088 ORTHO05D007281 3.7e-73 278.9 236 55.9
MD07G1295100 Malus domestica HOM05D006088 ORTHO05D007281 6.4e-73 278.1 236 57.2
CsaV3_3G019690 Cucumis sativus L. HOM05D006088 ORTHO05D007281 1.1e-72 277.3 238 57.6
Phvul.001G074500 Phaseolus vulgaris HOM05D006088 ORTHO05D007281 1.1e-72 277.3 236 55.9
MELO3C019378.2 Cucumis melo HOM05D006088 ORTHO05D007281 3.2e-72 275.8 236 56.4
Ca_12770_v3 Cicer arietinum L. HOM05D006088 ORTHO05D007281 4.1e-72 275.4 236 55.1
Thecc.03G202800 Theobroma cacao HOM05D006088 ORTHO05D007281 5.4e-72 275.0 236 56.4
Lalb_Chr04g0253281 Lupinus albus HOM05D006088 ORTHO05D007281 9.2e-72 274.2 236 58.1
RcHm_v2.0_Chr1g0381781 Rosa chinensis HOM05D006088 ORTHO05D007281 9.2e-72 274.2 236 56.8
FAN10G3213 Fragaria x ananassa HOM05D006088 ORTHO05D007281 1.2e-71 273.9 236 56.8
FAN10G3559 Fragaria x ananassa HOM05D006088 ORTHO05D007281 2.0e-71 273.1 233 57.1
FvH4_7g32160 Fragaria vesca HOM05D006088 ORTHO05D007281 2.7e-71 272.7 233 57.1
FAN03G2371 Fragaria x ananassa HOM05D006088 ORTHO05D007281 2.7e-71 272.7 233 57.1
FAN03G2860 Fragaria x ananassa HOM05D006088 ORTHO05D007281 2.7e-71 272.7 233 57.1
Sed0011789 Sechium edule HOM05D006088 ORTHO05D007281 2.7e-71 272.7 236 56.8
THA.LOC104814937 Tarenaya hassleriana HOM05D006088 ORTHO05D007281 2.7e-71 272.7 236 56.4
FAN01G2391 Fragaria x ananassa HOM05D006088 ORTHO05D007281 6.0e-71 271.6 233 57.1
Glyma.14G150400 Glycine max HOM05D006088 ORTHO05D007281 7.8e-71 271.2 236 55.1
CANSAT21G0843 Cannabis sativa HOM05D006088 ORTHO05D007281 1.0e-70 270.8 236 54.7
Glyma.13G078800 Glycine max HOM05D006088 ORTHO05D007281 1.3e-70 270.4 236 55.1
TWI39G0339 Tripterygium wilfordii HOM05D006088 ORTHO05D007281 8.6e-70 267.7 236 55.5
FAN06G1538 Fragaria x ananassa HOM05D006088 ORTHO05D007281 1.1e-69 267.3 233 56.7
Psat6g035960 Pisum sativum HOM05D006088 ORTHO05D007281 1.5e-69 266.9 238 55.0
arahy.Tifrunner.gnm1.ann1.F1TPPK Arachis hypogaea HOM05D006088 ORTHO05D007281 3.3e-69 265.8 249 54.2
BcaC03g17987 Brassica carinata HOM05D006088 ORTHO05D007281 4.3e-69 265.4 240 55.8
Aqoxy5G04265 Aquilegia oxysepala HOM05D006088 ORTHO05D007281 9.5e-69 264.2 236 53.8
arahy.Tifrunner.gnm1.ann1.W8KES2 Arachis hypogaea HOM05D006088 ORTHO05D007281 1.2e-68 263.8 237 54.9
BcaC03g17984 Brassica carinata HOM05D006088 ORTHO05D007281 2.1e-68 263.1 238 55.9
C02p60380 Brassica napus HOM05D006088 ORTHO05D007281 2.1e-68 263.1 238 55.9
BolC2t12093H Brassica oleracea HOM05D006088 ORTHO05D007281 2.1e-68 263.1 238 55.9
Thhalv10004042m.g Eutrema salsugineum HOM05D006088 ORTHO05D007281 2.1e-68 263.1 236 56.4
Sp2g22980 Schrenkiella parvula HOM05D006088 ORTHO05D007281 2.1e-68 263.1 236 55.9
TPR.G24535 Trifolium pratense HOM05D006088 ORTHO05D007281 2.8e-68 262.7 237 55.7
Lj5g0026434 Lotus japonicus HOM05D006088 ORTHO05D007281 8.0e-68 261.2 236 53.4
AT5G24340 Arabidopsis thaliana HOM05D006088 ORTHO05D007281 1.8e-67 260.0 236 54.2
BraA02t09012Z Brassica rapa HOM05D006088 ORTHO05D007281 1.8e-67 260.0 238 55.9
BcaB07g29905 Brassica carinata HOM05D006088 ORTHO05D007281 3.1e-67 259.2 238 55.5
BcaC03g17985 Brassica carinata HOM05D006088 ORTHO05D007281 4.0e-67 258.8 238 55.0
A02p40650 Brassica napus HOM05D006088 ORTHO05D007281 4.0e-67 258.8 238 55.5
CARHR189110 Cardamine hirsuta HOM05D006088 ORTHO05D007281 8.9e-67 257.7 236 54.7
Hund21022 Selenicereus undatus HOM05D006088 ORTHO05D007281 1.2e-66 257.3 237 54.0
Carub.0006s2216 Capsella rubella HOM05D006088 ORTHO05D007281 1.5e-66 256.9 236 53.8
unitig_52.g17713 Utricularia gibba HOM05D006088 ORTHO05D007281 1.5e-66 256.9 237 54.9
Aa31LG11G3620 Aethionema arabicum HOM05D006088 ORTHO05D007281 2.6e-66 256.1 236 54.7
Os07g0452400 Oryza sativa ssp. japonica HOM05D006088 ORTHO05D007281 2.9e-65 252.7 236 51.7
Zm00001eb096690 Zea mays HOM05D006088 ORTHO05D007281 8.3e-65 251.1 239 52.3
HPP92_025612 Vanilla planifolia HOM05D006088 ORTHO05D007281 1.9e-64 250.0 236 49.2
ATR0757G203 Amborella trichopoda HOM05D006088 ORTHO05D007281 1.1e-61 240.7 238 52.1
Haze_00251 Corylus avellana HOM05D006088 ORTHO05D007281 8.3e-57 224.6 236 49.6
Haze_00245 Corylus avellana HOM05D006088 ORTHO05D007281 2.4e-56 223.0 236 49.2
arahy.Tifrunner.gnm1.ann1.IYG6N7 Arachis hypogaea HOM05D006088 ORTHO05D007281 1.0e-54 217.6 239 50.2
Nitab4.5_0005326g0020 Nicotiana tabacum HOM05D006088 ORTHO05D007281 3.3e-53 212.6 236 47.0
Lsat_1_v5_gn_2_135240 Lactuca sativa HOM05D006088 ORTHO05D007281 1.6e-52 210.3 239 47.7
CiPaw.06G044500 Carya illinoinensis HOM05D006088 ORTHO05D007281 7.1e-48 194.9 140 67.1
Manes.01G039200 Manihot esculenta HOM05D006088 ORTHO05D007281 7.1e-48 194.9 140 65.7
AagrBONN_evm.TU.Sc2ySwM_117.2926 Anthoceros agrestis HOM05D006088 ORTHO05D007281 4.6e-47 192.2 237 41.4
Mapoly0133s0016 Marchantia polymorpha HOM05D006088 ORTHO05D007281 4.6e-47 192.2 239 44.4
SMO266G0077 Selaginella moellendorffii HOM05D006088 ORTHO05D007281 1.7e-46 190.3 193 47.2
Ciclev10020182m.g Citrus clementina HOM05D006088 ORTHO05D007281 3.0e-46 189.5 140 64.3
A02p40390 Brassica napus HOM05D006088 ORTHO05D007281 1.9e-45 186.8 240 45.0
Pp3c11_25950 Physcomitrium patens HOM05D006088 ORTHO05D007281 9.9e-42 174.5 235 40.4
arahy.Tifrunner.gnm1.ann1.GS5K3D Arachis hypogaea HOM05D006088 ORTHO05D007281 2.8e-36 156.4 234 39.7
CDE02G1851 Ceratophyllum demersum HOM05D006088 ORTHO05D007281 2.9e-33 146.4 147 49.0
AL6G35860 Arabidopsis lyrata HOM05D006088 ORTHO05D007281 1.1e-32 144.4 114 60.5
Hma1.2p1_0707F.1_g207060 Hydrangea macrophylla HOM05D006088 ORTHO05D007281 2.4e-32 143.3 102 63.7
CBR_g51519 Chara braunii HOM05D000019 ORTHO05D000353 8.7e-30 134.8 224 37.5
Ca_12778_v3 Cicer arietinum L. HOM05D006088 ORTHO05D007281 1.7e-25 120.6 95 56.8
A02p40510 Brassica napus HOM05D006088 ORTHO05D007281 1.6e-23 114.0 134 50.0
A02p40610 Brassica napus HOM05D006088 ORTHO05D007281 2.1e-23 113.6 134 49.3
VMungo0647G0665 Vigna mungo HOM05D006088 ORTHO05D007281 3.5e-23 112.8 81 59.3
CDE11G0933 Ceratophyllum demersum HOM05D006088 ORTHO05D007281 2.7e-15 86.7 71 59.2
TWI14G0770 Tripterygium wilfordii HOM05D006088 ORTHO05D007281 1.8e-11 73.9 71 57.7
A02p40350 Brassica napus HOM05D006088 ORTHO05D007281 2.6e-10 70.1 54 66.7
BraA02t09007Z Brassica rapa HOM05D006088 ORTHO05D007281 2.6e-10 70.1 87 43.7
Dinv35357 Davidia involucrata HOM05D006088 ORTHO05D007281 8.5e-09 65.1 39 61.5
Lsat_1_v5_gn_7_72820 Lactuca sativa HOM05D006088 ORTHO05D007281 2.5e-08 63.5 88 38.6


User provided reference genes

Program Settings