Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_010537 Daucus carota HOM05D000123 ORTHO05D000064 1.6e-67 259.2 125 100.0
Dinv17251 Davidia involucrata HOM05D000123 ORTHO05D000064 1.2e-25 120.2 126 50.8
Lj3P886T13 Lonicera japonica HOM05D000123 ORTHO05D000064 1.3e-24 116.7 114 54.4
QL09p023265 Quercus lobata HOM05D000123 ORTHO05D000064 3.2e-23 112.1 95 57.9
Thecc.05G215600 Theobroma cacao HOM05D000123 ORTHO05D000064 2.7e-22 109.0 100 56.0
COL.COLO4_15231 Corchorus olitorius HOM05D000123 ORTHO05D000064 3.5e-22 108.6 96 54.2
Rhsim09G0213400 Rhododendron simsii HOM05D000123 ORTHO05D000064 1.3e-21 106.7 103 51.5
Duzib106G0329 Durio zibethinus HOM05D000123 ORTHO05D000064 3.9e-21 105.1 110 50.9
Gohir.D08G241700 Gossypium hirsutum HOM05D000123 ORTHO05D000064 3.9e-21 105.1 125 48.0
Duzib128G1979 Durio zibethinus HOM05D000123 ORTHO05D000064 2.5e-20 102.4 130 46.2
Gorai.004G257000 Gossypium raimondii HOM05D000123 ORTHO05D000064 2.5e-20 102.4 125 47.2
Peaxi162Scf00516g00645 Petunia axillaris HOM05D000123 ORTHO05D000064 2.5e-20 102.4 101 52.5
Duzib177G0888 Durio zibethinus HOM05D000123 ORTHO05D000064 4.3e-20 101.7 95 55.8
Oeu038090.1 Olea europaea HOM05D000123 ORTHO05D000064 5.6e-20 101.3 109 48.6
Gohir.A08G221668 Gossypium hirsutum HOM05D000123 ORTHO05D000064 9.5e-20 100.5 107 51.4
Gohir.A02G141200 Gossypium hirsutum HOM05D000123 ORTHO05D000064 1.2e-19 100.1 100 50.0
vmacro22181 Vaccinium macrocarpon HOM05D000123 ORTHO05D000064 1.2e-19 100.1 101 49.5
TAR629G2768 Trochodendron aralioides HOM05D000123 ORTHO05D000064 1.6e-19 99.8 95 51.6
Atru.chr12.1879 Acer truncatum HOM05D000123 ORTHO05D000064 2.1e-19 99.4 131 42.0
Hma1.2p1_0649F.1_g195280 Hydrangea macrophylla HOM05D000123 ORTHO05D000064 3.6e-19 98.6 124 47.6
Gohir.D03G051700 Gossypium hirsutum HOM05D000123 ORTHO05D000064 4.0e-18 95.1 93 53.8
Gorai.003G053300 Gossypium raimondii HOM05D000123 ORTHO05D000064 4.0e-18 95.1 96 52.1
Nitab4.5_0000021g0670 Nicotiana tabacum HOM05D000123 ORTHO05D000064 5.2e-18 94.7 100 51.0
Sabra13G0073100 Salix brachista HOM05D000123 ORTHO05D000064 5.2e-18 94.7 93 50.5
Prupe.4G144200 Prunus persica HOM05D000123 ORTHO05D000064 8.9e-18 94.0 105 53.3
Potri.013G079800 Populus trichocarpa HOM05D000123 ORTHO05D000064 1.2e-17 93.6 94 50.0
Haze_00400 Corylus avellana HOM05D000123 ORTHO05D000064 1.5e-17 93.2 90 52.2
Sc19g0000110 Simmondsia chinensis HOM05D000123 ORTHO05D000064 1.5e-17 93.2 100 49.0
Manes.09G127300 Manihot esculenta HOM05D000123 ORTHO05D000064 2.6e-17 92.4 91 54.9
CiPaw.05G216400 Carya illinoinensis HOM05D000123 ORTHO05D000064 5.8e-17 91.3 90 52.2
MD10G1197700 Malus domestica HOM05D000123 ORTHO05D000064 5.8e-17 91.3 99 48.5
PGSC0003DMG400003160 Solanum tuberosum HOM05D000123 ORTHO05D000064 5.8e-17 91.3 99 48.5
TAR375G0729 Trochodendron aralioides HOM05D000123 ORTHO05D000064 1.3e-16 90.1 91 52.7
Nitab4.5_0001762g0010 Nicotiana tabacum HOM05D000123 ORTHO05D000064 1.7e-16 89.7 100 49.0
CANSAT56G3125 Cannabis sativa HOM05D000123 ORTHO05D000064 2.9e-16 89.0 104 48.1
TAR636G2714 Trochodendron aralioides HOM05D000123 ORTHO05D000064 3.7e-16 88.6 93 49.5
MD05G1213800 Malus domestica HOM05D000123 ORTHO05D000064 4.9e-16 88.2 99 47.5
CAN.G1131.21 Capsicum annuum HOM05D000123 ORTHO05D000064 8.3e-16 87.4 122 41.8
Nn1g00179 Nelumbo nucifera HOM05D000123 ORTHO05D000064 3.2e-15 85.5 91 50.5
Oeu060393.1 Olea europaea HOM05D000123 ORTHO05D000064 3.2e-15 85.5 118 39.8
Ciclev10020928m.g Citrus clementina HOM05D000123 ORTHO05D000064 4.1e-15 85.1 107 44.9
Sopen03g027860 Solanum pennellii HOM05D000123 ORTHO05D000064 5.4e-15 84.7 89 49.4
CiPaw.06G034100 Carya illinoinensis HOM05D000123 ORTHO05D000064 7.0e-15 84.3 98 45.9
Solyc03g097120.3 Solanum lycopersicum HOM05D000123 ORTHO05D000064 2.7e-14 82.4 89 48.3
MSTRG.1992 Avicennia marina HOM05D000123 ORTHO05D000064 4.6e-14 81.6 104 44.2
CDE06G1653 Ceratophyllum demersum HOM05D000123 ORTHO05D000064 1.0e-13 80.5 110 42.7
Cfa016045 Carpinus fangiana HOM05D000123 ORTHO05D000064 1.7e-13 79.7 90 50.0
Migut.F00088 Erythranthe guttata HOM05D000123 ORTHO05D000064 1.7e-13 79.7 128 40.6
Hma1.2p1_0572F.1_g181160 Hydrangea macrophylla HOM05D000123 ORTHO05D000064 3.0e-13 79.0 102 42.2
CDE12G0213 Ceratophyllum demersum HOM05D000123 ORTHO05D000064 3.9e-13 78.6 110 42.7
MSTRG.26926 Avicennia marina HOM05D000123 ORTHO05D000064 5.1e-13 78.2 91 47.3
SGA_v2.0_scaffold44G16900 Striga asiatica HOM05D000123 ORTHO05D000064 8.6e-13 77.4 124 39.5
Aa31LG5G13480 Aethionema arabicum HOM05D000123 ORTHO05D000064 1.1e-12 77.0 111 44.1
Eucgr.A02976 Eucalyptus grandis HOM05D000123 ORTHO05D000064 1.1e-12 77.0 95 41.1
Nitab4.5_0000645g0120 Nicotiana tabacum HOM05D000123 ORTHO05D000064 1.1e-12 77.0 91 40.7
Nitab4.5_0000556g0120 Nicotiana tabacum HOM05D000123 ORTHO05D000064 2.5e-12 75.9 101 44.6
Nitab4.5_0002998g0060 Nicotiana tabacum HOM05D000123 ORTHO05D000064 5.6e-12 74.7 108 37.0
Cpa.g.sc43.94 Carica papaya HOM05D000123 ORTHO05D000064 7.3e-12 74.3 100 42.0
Nitab4.5_0002778g0010 Nicotiana tabacum HOM05D000123 ORTHO05D000064 7.3e-12 74.3 102 43.1
MSTRG.13748 Avicennia marina HOM05D000123 ORTHO05D000064 2.1e-11 72.8 103 41.7
Nitab4.5_0000353g0010 Nicotiana tabacum HOM05D000123 ORTHO05D000064 4.7e-11 71.6 124 37.9
CSS0048291 Camellia sinensis var. sinensis HOM05D000123 ORTHO05D000064 8.1e-11 70.9 105 40.0
Dinv28984 Davidia involucrata HOM05D000123 ORTHO05D000064 8.1e-11 70.9 136 35.3
Medtr4g077970 Medicago truncatula HOM05D000123 ORTHO05D000064 1.4e-10 70.1 115 40.9
ATR0829G121 Amborella trichopoda HOM05D000123 ORTHO05D000064 2.3e-10 69.3 95 44.2
HPP92_012820 Vanilla planifolia HOM05D000123 ORTHO05D000064 3.1e-10 68.9 101 39.6
Sp6g27310 Schrenkiella parvula HOM05D000123 ORTHO05D000064 4.0e-10 68.6 105 40.0
Rhsim11G0019200 Rhododendron simsii HOM05D000123 ORTHO05D000064 6.8e-10 67.8 102 42.2
TPR.G39485 Trifolium pratense HOM05D000123 ORTHO05D000064 6.8e-10 67.8 115 38.3
arahy.Tifrunner.gnm1.ann1.7L0DWH Arachis hypogaea HOM05D000123 ORTHO05D000064 8.9e-10 67.4 114 37.7
arahy.Tifrunner.gnm1.ann1.Q8NRQP Arachis hypogaea HOM05D000123 ORTHO05D000064 8.9e-10 67.4 114 37.7
CSS0043310 Camellia sinensis var. sinensis HOM05D000123 ORTHO05D000064 1.2e-09 67.0 103 41.7
AUR62028193 Chenopodium quinoa HOM05D000123 ORTHO05D000064 1.2e-09 67.0 127 33.1
vmacro00307 Vaccinium macrocarpon HOM05D000123 ORTHO05D000064 1.2e-09 67.0 100 43.0
AUR62002076 Chenopodium quinoa HOM05D000123 ORTHO05D000064 1.5e-09 66.6 127 33.1
Peaxi162Scf00045g00131 Petunia axillaris HOM05D000123 ORTHO05D000064 1.5e-09 66.6 104 39.4
Aqoxy3G02221 Aquilegia oxysepala HOM05D000123 ORTHO05D000064 2.6e-09 65.9 134 36.6
Cc08_g03200 Coffea canephora HOM05D000123 ORTHO05D000064 3.4e-09 65.5 99 41.4
PSO063G3700 Papaver somniferum HOM05D000123 ORTHO05D000064 3.4e-09 65.5 118 39.8
HPP92_005384 Vanilla planifolia HOM05D000123 ORTHO05D000064 4.4e-09 65.1 101 42.6
EL10Ac3g05062 Beta vulgaris HOM05D000123 ORTHO05D000064 5.8e-09 64.7 133 32.3
Oeu001190.1 Olea europaea HOM05D000123 ORTHO05D000064 5.8e-09 64.7 83 45.8
Sopen08g025150 Solanum pennellii HOM05D000123 ORTHO05D000064 5.8e-09 64.7 111 39.6
PGSC0003DMG400014811 Solanum tuberosum HOM05D000123 ORTHO05D000064 5.8e-09 64.7 110 38.2
THA.LOC104827204 Tarenaya hassleriana HOM05D000123 ORTHO05D000064 5.8e-09 64.7 83 47.0
Dinv25242 Davidia involucrata HOM05D000123 ORTHO05D000064 7.5e-09 64.3 102 41.2
Hma1.2p1_2161F.1_g315670 Hydrangea macrophylla HOM05D000123 ORTHO05D000064 9.9e-09 63.9 101 39.6
Solyc08g076590.3 Solanum lycopersicum HOM05D000123 ORTHO05D000064 9.9e-09 63.9 111 39.6
Cpa.g.sc90.16 Carica papaya HOM05D000123 ORTHO05D000064 1.3e-08 63.5 126 34.1
Lj3g0023839 Lotus japonicus HOM05D000123 ORTHO05D000064 1.7e-08 63.2 96 37.5
Sopen08g001190 Solanum pennellii HOM05D000123 ORTHO05D000064 1.7e-08 63.2 100 39.0
SalBow1G8040 Salvia bowleyana HOM05D000123 ORTHO05D000064 3.7e-08 62.0 99 35.4
Zm00001eb064860 Zea mays HOM05D000123 ORTHO05D000064 3.7e-08 62.0 91 38.5
PSO782G5291 Papaver somniferum HOM05D000123 ORTHO05D000064 4.9e-08 61.6 115 40.0
SalBow4G3227 Salvia bowleyana HOM05D000123 ORTHO05D000064 4.9e-08 61.6 152 30.3
Solyc08g005170.3 Solanum lycopersicum HOM05D000123 ORTHO05D000064 4.9e-08 61.6 101 38.6
PGSC0003DMG400017846 Solanum tuberosum HOM05D000123 ORTHO05D000064 4.9e-08 61.6 105 38.1
Thhalv10013428m.g Eutrema salsugineum HOM05D000123 ORTHO05D000064 6.4e-08 61.2 102 38.2
Peaxi162Scf00170g01112 Petunia axillaris HOM05D000123 ORTHO05D000064 6.4e-08 61.2 128 38.3
Peaxi162Scf00815g00357 Petunia axillaris HOM05D000123 ORTHO05D000064 6.4e-08 61.2 106 36.8
PGR042G0979 Punica granatum HOM05D000123 ORTHO05D000064 6.4e-08 61.2 102 33.3
Ca_18958_v3 Cicer arietinum L. HOM05D000123 ORTHO05D000064 8.3e-08 60.8 105 38.1
Lalb_Chr03g0024391 Lupinus albus HOM05D000123 ORTHO05D000064 8.3e-08 60.8 105 37.1
BcaNung04952 Brassica carinata HOM05D000123 ORTHO05D000064 1.4e-07 60.1 108 35.2
CAN.G137.1 Capsicum annuum HOM05D000123 ORTHO05D000064 1.4e-07 60.1 79 43.0
CARHR077010 Cardamine hirsuta HOM05D000123 ORTHO05D000064 1.4e-07 60.1 117 36.8
Hund09799 Selenicereus undatus HOM05D000123 ORTHO05D000064 1.4e-07 60.1 101 38.6
PGSC0003DMG400027036 Solanum tuberosum HOM05D000123 ORTHO05D000064 1.4e-07 60.1 68 47.1
CAN.G298.55 Capsicum annuum HOM05D000123 ORTHO05D000064 1.9e-07 59.7 129 36.4
QL12p004416 Quercus lobata HOM05D000123 ORTHO05D000064 1.9e-07 59.7 98 39.8
Duzib205G1604 Durio zibethinus HOM05D000123 ORTHO05D000064 3.2e-07 58.9 101 36.6
Psat7g170680 Pisum sativum HOM05D000123 ORTHO05D000064 3.2e-07 58.9 107 37.4
Potri.001G138900 Populus trichocarpa HOM05D000123 ORTHO05D000064 3.2e-07 58.9 115 33.9
SGA_v2.0_scaffold6G03151 Striga asiatica HOM05D000123 ORTHO05D000064 3.2e-07 58.9 86 43.0
Glyma.01G015900 Glycine max HOM05D000123 ORTHO05D000064 5.4e-07 58.2 126 34.9
CARHR196340 Cardamine hirsuta HOM05D000123 ORTHO05D000064 7.1e-07 57.8 111 36.9
BcaC03g18517 Brassica carinata HOM05D000123 ORTHO05D000064 9.2e-07 57.4 103 35.0
C02p08610 Brassica napus HOM05D000123 ORTHO05D000064 9.2e-07 57.4 103 35.0
BolC2t06776H Brassica oleracea HOM05D000123 ORTHO05D000064 9.2e-07 57.4 104 34.6
Gohir.A13G156700 Gossypium hirsutum HOM05D000123 ORTHO05D000064 9.2e-07 57.4 81 38.3
AT5G16820 Arabidopsis thaliana HOM05D000123 ORTHO05D000064 1.2e-06 57.0 131 34.4
Glyma.09G206600 Glycine max HOM05D000123 ORTHO05D000064 1.2e-06 57.0 124 33.9
Duzib068G1025 Durio zibethinus HOM05D000123 ORTHO05D000064 1.6e-06 56.6 103 32.0
Thecc.03G307200 Theobroma cacao HOM05D000123 ORTHO05D000064 1.6e-06 56.6 96 36.5
ATR0118G016 Amborella trichopoda HOM05D000123 ORTHO05D000064 2.7e-06 55.8 74 41.9
AL6G27840 Arabidopsis lyrata HOM05D000123 ORTHO05D000064 2.7e-06 55.8 87 40.2
AT3G02990 Arabidopsis thaliana HOM05D000123 ORTHO05D000064 2.7e-06 55.8 107 36.4
Gorai.013G183500 Gossypium raimondii HOM05D000123 ORTHO05D000064 2.7e-06 55.8 56 48.2
Aa31LG11G12760 Aethionema arabicum HOM05D000123 ORTHO05D000064 3.5e-06 55.5 91 46.2
BraA02t05345Z Brassica rapa HOM05D000123 ORTHO05D000064 3.5e-06 55.5 104 33.7
Ca_08152_v3 Cicer arietinum L. HOM05D000123 ORTHO05D000064 3.5e-06 55.5 124 31.5
ClCG10G001410 Citrullus lanatus HOM05D000123 ORTHO05D000064 3.5e-06 55.5 101 36.6
CsaV3_3G001500 Cucumis sativus L. HOM05D000123 ORTHO05D000064 3.5e-06 55.5 101 36.6
Sabra01G0107900 Salix brachista HOM05D000123 ORTHO05D000064 3.5e-06 55.5 101 33.7
A02p03800 Brassica napus HOM05D000123 ORTHO05D000064 4.6e-06 55.1 104 33.7
Gohir.D13G161500 Gossypium hirsutum HOM05D000123 ORTHO05D000064 4.6e-06 55.1 56 48.2
RcHm_v2.0_Chr5g0027071 Rosa chinensis HOM05D000123 ORTHO05D000064 4.6e-06 55.1 96 33.3
FvH4_3g16090 Fragaria vesca HOM05D000123 ORTHO05D000064 6.0e-06 54.7 96 31.2
FAN25G1980 Fragaria x ananassa HOM05D000123 ORTHO05D000064 6.0e-06 54.7 96 31.2
TWI81G0814 Tripterygium wilfordii HOM05D000123 ORTHO05D000064 6.0e-06 54.7 108 33.3
GSVIVG01013106001 Vitis vinifera HOM05D000123 ORTHO05D000064 6.0e-06 54.7 101 34.7
Carub.0006s1504 Capsella rubella HOM05D000123 ORTHO05D000064 7.8e-06 54.3 89 39.3
Sc01g0007320 Simmondsia chinensis HOM05D000123 ORTHO05D000064 7.8e-06 54.3 123 34.1


User provided reference genes

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