Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_010491 Daucus carota HOM05D007531 ORTHO05D009484 1.7e-35 152.5 100 100.0
Nitab4.5_0001092g0060 Nicotiana tabacum HOM05D007531 ORTHO05D009484 6.4e-19 97.4 100 52.0
Dinv42427 Davidia involucrata HOM05D007531 ORTHO05D009484 8.4e-19 97.1 59 76.3
Duzib168G1872 Durio zibethinus HOM05D007531 ORTHO05D009484 7.1e-18 94.0 100 52.0
Nitab4.5_0001699g0060 Nicotiana tabacum HOM05D007531 ORTHO05D009484 1.2e-17 93.2 98 50.0
Migut.L01591 Erythranthe guttata HOM05D007531 ORTHO05D009484 2.1e-17 92.4 59 74.6
CSS0023587 Camellia sinensis var. sinensis HOM05D007531 ORTHO05D009484 2.7e-17 92.0 59 71.2
Nitab4.5_0007540g0040 Nicotiana tabacum HOM05D007531 ORTHO05D009484 3.5e-17 91.7 98 50.0
SalBow6G4078 Salvia bowleyana HOM05D007531 ORTHO05D009484 3.5e-17 91.7 59 69.5
Prupe.7G193100 Prunus persica HOM05D007531 ORTHO05D009484 4.6e-17 91.3 59 72.9
MD15G1222700 Malus domestica HOM05D007531 ORTHO05D009484 6.0e-17 90.9 59 71.2
COL.COLO4_21218 Corchorus olitorius HOM05D007531 ORTHO05D009484 7.9e-17 90.5 55 74.5
Gohir.D08G267900 Gossypium hirsutum HOM05D007531 ORTHO05D009484 7.9e-17 90.5 59 71.2
Gorai.004G285500 Gossypium raimondii HOM05D007531 ORTHO05D009484 7.9e-17 90.5 59 71.2
Sopen07g022090 Solanum pennellii HOM05D007531 ORTHO05D009484 7.9e-17 90.5 98 51.0
Thecc.09G071300 Theobroma cacao HOM05D007531 ORTHO05D009484 1.0e-16 90.1 59 72.9
Duzib150G1567 Durio zibethinus HOM05D007531 ORTHO05D009484 1.8e-16 89.4 59 72.9
Gohir.A08G246700 Gossypium hirsutum HOM05D007531 ORTHO05D009484 1.8e-16 89.4 59 71.2
Oeu028116.1 Olea europaea HOM05D007531 ORTHO05D009484 2.3e-16 89.0 105 47.6
Solyc07g042450.3 Solanum lycopersicum HOM05D007531 ORTHO05D009484 2.3e-16 89.0 98 50.0
GSVIVG01015026001 Vitis vinifera HOM05D007531 ORTHO05D009484 2.3e-16 89.0 59 71.2
Rhsim05G0002900 Rhododendron simsii HOM05D007531 ORTHO05D009484 3.0e-16 88.6 57 70.2
PGSC0003DMG400013576 Solanum tuberosum HOM05D007531 ORTHO05D009484 3.0e-16 88.6 57 73.7
MSTRG.19432 Avicennia marina HOM05D007531 ORTHO05D009484 3.9e-16 88.2 106 50.0
CANSAT56G3767 Cannabis sativa HOM05D007531 ORTHO05D009484 5.1e-16 87.8 59 67.8
Cpa.g.sc82.75 Carica papaya HOM05D007531 ORTHO05D009484 5.1e-16 87.8 59 74.6
Sc14g0000480 Simmondsia chinensis HOM05D007531 ORTHO05D009484 5.1e-16 87.8 59 71.2
CAN.G660.22 Capsicum annuum HOM05D007531 ORTHO05D009484 6.7e-16 87.4 57 71.9
Aa31LG7G3950 Aethionema arabicum HOM05D007531 ORTHO05D009484 8.7e-16 87.0 59 72.9
Potri.006G137401 Populus trichocarpa HOM05D007531 ORTHO05D009484 8.7e-16 87.0 57 70.2
PGR042G0735 Punica granatum HOM05D007531 ORTHO05D009484 8.7e-16 87.0 52 78.8
Lsat_1_v5_gn_7_35440 Lactuca sativa HOM05D007531 ORTHO05D009484 1.5e-15 86.3 57 75.4
SGA_v2.0_scaffold296G47570 Striga asiatica HOM05D007531 ORTHO05D009484 1.5e-15 86.3 59 72.9
TWI63G1700 Tripterygium wilfordii HOM05D007531 ORTHO05D009484 1.5e-15 86.3 57 68.4
Actinidia39623 Actinidia chinensis HOM05D007531 ORTHO05D009484 3.3e-15 85.1 59 67.8
Manes.03G043400 Manihot esculenta HOM05D007531 ORTHO05D009484 3.3e-15 85.1 59 66.1
EL10Ac8g18992 Beta vulgaris HOM05D007531 ORTHO05D009484 4.3e-15 84.7 52 76.9
Peaxi162Scf00191g01018 Petunia axillaris HOM05D007531 ORTHO05D009484 4.3e-15 84.7 57 68.4
TAR626G0337 Trochodendron aralioides HOM05D007531 ORTHO05D009484 4.3e-15 84.7 59 66.1
ClCG11G000070 Citrullus lanatus HOM05D007531 ORTHO05D009484 1.3e-14 83.2 60 68.3
Thhalv10009175m.g Eutrema salsugineum HOM05D007531 ORTHO05D009484 1.6e-14 82.8 59 71.2
Sp1g17150 Schrenkiella parvula HOM05D007531 ORTHO05D009484 1.6e-14 82.8 59 69.5
AL1G31820 Arabidopsis lyrata HOM05D007531 ORTHO05D009484 2.1e-14 82.4 59 67.8
Ciclev10010006m.g Citrus clementina HOM05D007531 ORTHO05D009484 2.1e-14 82.4 52 71.2
CsaV3_5G027570 Cucumis sativus L. HOM05D007531 ORTHO05D009484 2.8e-14 82.0 58 69.0
Hma1.2p1_0519F.1_g171380 Hydrangea macrophylla HOM05D007531 ORTHO05D009484 2.8e-14 82.0 55 72.7
Dinv25515 Davidia involucrata HOM05D007531 ORTHO05D009484 3.7e-14 81.6 59 66.1
Manes.16G092000 Manihot esculenta HOM05D007531 ORTHO05D009484 8.1e-14 80.5 59 64.4
AT1G19240 Arabidopsis thaliana HOM05D007531 ORTHO05D009484 1.1e-13 80.1 59 66.1
CDE06G0851 Ceratophyllum demersum HOM05D007531 ORTHO05D009484 1.1e-13 80.1 57 64.9
Atru.chr7.1757 Acer truncatum HOM05D007531 ORTHO05D009484 1.4e-13 79.7 59 62.7
vmacro17085 Vaccinium macrocarpon HOM05D007531 ORTHO05D009484 1.4e-13 79.7 46 76.1
FAN23G0531 Fragaria x ananassa HOM05D007531 ORTHO05D009484 1.8e-13 79.3 57 61.4
C05p17640 Brassica napus HOM05D007531 ORTHO05D009484 2.4e-13 79.0 59 66.1
BolC5t30467H Brassica oleracea HOM05D007531 ORTHO05D009484 2.4e-13 79.0 59 66.1
Carub.0001s1884 Capsella rubella HOM05D007531 ORTHO05D009484 2.4e-13 79.0 104 44.2
MBI19_g38003_MAGBIO Magnolia biondii HOM05D007531 ORTHO05D009484 2.4e-13 79.0 52 65.4
RcHm_v2.0_Chr2g0095821 Rosa chinensis HOM05D007531 ORTHO05D009484 2.4e-13 79.0 57 61.4
Sabra06G0107500 Salix brachista HOM05D007531 ORTHO05D009484 2.4e-13 79.0 46 78.3
ECA246G1013 Erigeron canadensis HOM05D007531 ORTHO05D009484 4.0e-13 78.2 59 66.1
FAN26G1659 Fragaria x ananassa HOM05D007531 ORTHO05D009484 4.0e-13 78.2 57 59.6
FAN26G1806 Fragaria x ananassa HOM05D007531 ORTHO05D009484 4.0e-13 78.2 57 59.6
A06p15390 Brassica napus HOM05D007531 ORTHO05D009484 5.3e-13 77.8 59 64.4
BraA06t24652Z Brassica rapa HOM05D007531 ORTHO05D009484 5.3e-13 77.8 59 64.4
FvH4_1g09260 Fragaria vesca HOM05D007531 ORTHO05D009484 5.3e-13 77.8 57 59.6
FAN19G1112 Fragaria x ananassa HOM05D007531 ORTHO05D009484 5.3e-13 77.8 57 59.6
TPR.G12718 Trifolium pratense HOM05D007531 ORTHO05D009484 6.9e-13 77.4 55 61.8
Eucgr.H05011 Eucalyptus grandis HOM05D007531 ORTHO05D009484 9.0e-13 77.0 52 69.2
unitig_578.g16405 Utricularia gibba HOM05D007531 ORTHO05D009484 9.0e-13 77.0 57 64.9
CARHR019840 Cardamine hirsuta HOM05D007531 ORTHO05D009484 1.2e-12 76.6 43 81.4
THA.LOC104809045 Tarenaya hassleriana HOM05D007531 ORTHO05D009484 1.2e-12 76.6 59 64.4
BcaB07g31940 Brassica carinata HOM05D007531 ORTHO05D009484 1.5e-12 76.3 59 64.4
BcaC07g38992 Brassica carinata HOM05D007531 ORTHO05D009484 1.5e-12 76.3 59 64.4
Cfa002948 Carpinus fangiana HOM05D007531 ORTHO05D009484 1.5e-12 76.3 57 64.9
HPP92_021129 Vanilla planifolia HOM05D007531 ORTHO05D009484 1.5e-12 76.3 57 59.6
HPP92_021130 Vanilla planifolia HOM05D007531 ORTHO05D009484 1.5e-12 76.3 57 59.6
Medtr4g124770 Medicago truncatula HOM05D007531 ORTHO05D009484 2.0e-12 75.9 55 60.0
Cc06_g12620 Coffea canephora HOM05D007531 ORTHO05D009484 4.5e-12 74.7 52 71.2
Lj4g0024105 Lotus japonicus HOM05D007531 ORTHO05D009484 4.5e-12 74.7 55 58.2
Aqoxy7G04136 Aquilegia oxysepala HOM05D007531 ORTHO05D009484 1.0e-11 73.6 57 56.1
QL11p002692 Quercus lobata HOM05D007531 ORTHO05D009484 1.3e-11 73.2 59 62.7
arahy.Tifrunner.gnm1.ann1.ETL5CI Arachis hypogaea HOM05D007531 ORTHO05D009484 2.2e-11 72.4 53 62.3
arahy.Tifrunner.gnm1.ann1.J82KAY Arachis hypogaea HOM05D007531 ORTHO05D009484 2.2e-11 72.4 53 62.3
Psat0s2373g0160 Pisum sativum HOM05D007531 ORTHO05D009484 8.4e-11 70.5 54 57.4
Phvul.004G046500 Phaseolus vulgaris HOM05D007531 ORTHO05D009484 2.5e-10 68.9 53 56.6
Sed0019513 Sechium edule HOM05D007531 ORTHO05D009484 3.2e-10 68.6 43 72.1
Glyma.13G113300 Glycine max HOM05D007531 ORTHO05D009484 4.2e-10 68.2 43 65.1
Os01g0144700 Oryza sativa ssp. japonica HOM05D007531 ORTHO05D009484 1.6e-09 66.2 51 58.8
Lalb_Chr11g0074031 Lupinus albus HOM05D007531 ORTHO05D009484 3.5e-09 65.1 55 52.7
VMungo1215G2546 Vigna mungo HOM05D007531 ORTHO05D009484 6.0e-09 64.3 48 56.2
Glyma.17G046400 Glycine max HOM05D007531 ORTHO05D009484 1.3e-08 63.2 48 58.3
Phvul.003G128000 Phaseolus vulgaris HOM05D007531 ORTHO05D009484 6.7e-08 60.8 51 54.9
FAN28G0689 Fragaria x ananassa HOM05D007531 ORTHO05D009484 1.1e-07 60.1 37 70.3


User provided reference genes

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