Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_010438 Daucus carota HOM05D006393 ORTHO05D008088 4.0e-154 548.1 288 100.0
Rhsim01G0090600 Rhododendron simsii HOM05D006393 ORTHO05D008088 3.4e-121 438.7 288 76.4
Actinidia09396 Actinidia chinensis HOM05D006393 ORTHO05D008088 4.9e-120 434.9 288 76.0
CSS0031330 Camellia sinensis var. sinensis HOM05D006393 ORTHO05D008088 3.2e-119 432.2 288 76.4
Hma1.2p1_0018F.1_g013070 Hydrangea macrophylla HOM05D006393 ORTHO05D008088 5.4e-119 431.4 288 76.7
vmacro20677 Vaccinium macrocarpon HOM05D006393 ORTHO05D008088 1.6e-118 429.9 282 76.2
MD02G1061500 Malus domestica HOM05D006393 ORTHO05D008088 2.7e-118 429.1 288 72.9
Prupe.7G235100 Prunus persica HOM05D006393 ORTHO05D008088 3.5e-118 428.7 288 74.0
Manes.16G064200 Manihot esculenta HOM05D006393 ORTHO05D008088 1.7e-117 426.4 284 74.6
Thecc.09G116800 Theobroma cacao HOM05D006393 ORTHO05D008088 1.7e-117 426.4 288 74.3
FvH4_1g04221 Fragaria vesca HOM05D006393 ORTHO05D008088 3.0e-117 425.6 288 72.9
RcHm_v2.0_Chr2g0089771 Rosa chinensis HOM05D006393 ORTHO05D008088 6.6e-117 424.5 288 72.6
CiPaw.03G236400 Carya illinoinensis HOM05D006393 ORTHO05D008088 1.5e-116 423.3 288 72.9
Haze_25669 Corylus avellana HOM05D006393 ORTHO05D008088 2.5e-116 422.5 288 74.7
Cfa003299 Carpinus fangiana HOM05D006393 ORTHO05D008088 3.3e-116 422.2 288 74.0
COL.COLO4_34948 Corchorus olitorius HOM05D006393 ORTHO05D008088 3.3e-116 422.2 288 74.0
QL02p086364 Quercus lobata HOM05D006393 ORTHO05D008088 4.3e-116 421.8 287 72.1
Sopen10g030590 Solanum pennellii HOM05D006393 ORTHO05D008088 2.1e-115 419.5 288 73.6
GSVIVG01015453001 Vitis vinifera HOM05D006393 ORTHO05D008088 2.1e-115 419.5 282 73.8
Sed0023374 Sechium edule HOM05D006393 ORTHO05D008088 2.8e-115 419.1 288 71.9
Atru.chr7.1280 Acer truncatum HOM05D006393 ORTHO05D008088 4.7e-115 418.3 288 72.9
Cpa.g.sc23.161 Carica papaya HOM05D006393 ORTHO05D008088 4.7e-115 418.3 288 72.9
Migut.C00826 Erythranthe guttata HOM05D006393 ORTHO05D008088 6.2e-115 417.9 288 72.6
Solyc10g079970.2 Solanum lycopersicum HOM05D006393 ORTHO05D008088 8.1e-115 417.5 288 73.3
CAN.G1665.6 Capsicum annuum HOM05D006393 ORTHO05D008088 1.4e-114 416.8 288 72.9
Ciclev10008889m.g Citrus clementina HOM05D006393 ORTHO05D008088 1.4e-114 416.8 288 72.9
Duzib168G1441 Durio zibethinus HOM05D006393 ORTHO05D008088 4.0e-114 415.2 288 72.9
Potri.018G073000 Populus trichocarpa HOM05D006393 ORTHO05D008088 4.0e-114 415.2 288 72.6
Nitab4.5_0002551g0020 Nicotiana tabacum HOM05D006393 ORTHO05D008088 5.2e-114 414.8 288 71.5
MELO3C025307.2 Cucumis melo HOM05D006393 ORTHO05D008088 8.9e-114 414.1 288 70.8
CsaV3_1G030940 Cucumis sativus L. HOM05D006393 ORTHO05D008088 2.6e-113 412.5 288 70.5
Gohir.D06G058100 Gossypium hirsutum HOM05D006393 ORTHO05D008088 2.6e-113 412.5 288 72.6
Gorai.010G068300 Gossypium raimondii HOM05D006393 ORTHO05D008088 3.4e-113 412.1 288 72.6
PGSC0003DMG401029823 Solanum tuberosum HOM05D006393 ORTHO05D008088 3.4e-113 412.1 288 72.6
TWI34G1546 Tripterygium wilfordii HOM05D006393 ORTHO05D008088 4.4e-113 411.8 288 71.9
Gohir.A06G059900 Gossypium hirsutum HOM05D006393 ORTHO05D008088 1.3e-112 410.2 288 72.6
Lalb_Chr13g0302251 Lupinus albus HOM05D006393 ORTHO05D008088 1.7e-112 409.8 282 73.4
PGR102G0276 Punica granatum HOM05D006393 ORTHO05D008088 1.7e-112 409.8 288 71.5
Hund09172 Selenicereus undatus HOM05D006393 ORTHO05D008088 2.2e-112 409.5 288 70.1
HanXRQChr03g0062141 Helianthus annuus HOM05D006393 ORTHO05D008088 2.9e-112 409.1 288 72.2
arahy.Tifrunner.gnm1.ann1.RZM4QH Arachis hypogaea HOM05D006393 ORTHO05D008088 8.4e-112 407.5 282 73.0
MSTRG.1197 Avicennia marina HOM05D006393 ORTHO05D008088 8.4e-112 407.5 288 70.8
ClCG06G010490 Citrullus lanatus HOM05D006393 ORTHO05D008088 1.1e-111 407.1 289 69.6
AT5G19930 Arabidopsis thaliana HOM05D006393 ORTHO05D008088 3.2e-111 405.6 280 71.8
arahy.Tifrunner.gnm1.ann1.3AE437 Arachis hypogaea HOM05D006393 ORTHO05D008088 3.5e-110 402.1 280 72.5
Aqoxy7G01879 Aquilegia oxysepala HOM05D006393 ORTHO05D008088 6.0e-110 401.4 287 70.4
Sp6g24450 Schrenkiella parvula HOM05D006393 ORTHO05D008088 7.8e-110 401.0 280 70.7
Thhalv10014278m.g Eutrema salsugineum HOM05D006393 ORTHO05D008088 1.3e-109 400.2 280 71.4
Sabra18G0063700 Salix brachista HOM05D006393 ORTHO05D008088 1.7e-109 399.8 288 71.9
AL6G31460 Arabidopsis lyrata HOM05D006393 ORTHO05D008088 2.3e-109 399.4 280 70.4
SGA_v2.0_scaffold92G28235 Striga asiatica HOM05D006393 ORTHO05D008088 3.0e-109 399.1 288 71.2
Carub.0006s1830 Capsella rubella HOM05D006393 ORTHO05D008088 3.9e-109 398.7 280 70.4
Lj7A639G46 Lonicera japonica HOM05D006393 ORTHO05D008088 3.9e-109 398.7 322 65.2
Aa31LG9G6050 Aethionema arabicum HOM05D006393 ORTHO05D008088 5.1e-109 398.3 285 68.4
A10p19800 Brassica napus HOM05D006393 ORTHO05D008088 6.6e-109 397.9 280 70.7
PSO782G0281 Papaver somniferum HOM05D006393 ORTHO05D008088 6.6e-109 397.9 284 69.0
BraA10t44056Z Brassica rapa HOM05D006393 ORTHO05D008088 1.1e-108 397.1 280 70.4
BcaC04g19399 Brassica carinata HOM05D006393 ORTHO05D008088 1.5e-108 396.7 280 70.4
C09p56120 Brassica napus HOM05D006393 ORTHO05D008088 1.5e-108 396.7 280 70.4
BolC9t58479H Brassica oleracea HOM05D006393 ORTHO05D008088 1.5e-108 396.7 280 70.4
BcaB08g36553 Brassica carinata HOM05D006393 ORTHO05D008088 4.3e-108 395.2 280 69.6
AUR62033415 Chenopodium quinoa HOM05D006393 ORTHO05D008088 9.6e-108 394.0 288 67.7
Lj4g0026371 Lotus japonicus HOM05D006393 ORTHO05D008088 2.8e-107 392.5 285 71.2
Nn8g39292 Nelumbo nucifera HOM05D006393 ORTHO05D008088 8.1e-107 391.0 288 68.4
unitig_37.g13035 Utricularia gibba HOM05D006393 ORTHO05D008088 1.4e-106 390.2 288 67.7
Psat4g042480 Pisum sativum HOM05D006393 ORTHO05D008088 4.0e-106 388.7 282 68.4
EL10Ac8g18557 Beta vulgaris HOM05D006393 ORTHO05D008088 3.4e-105 385.6 288 68.4
TPR.G26762 Trifolium pratense HOM05D006393 ORTHO05D008088 3.4e-105 385.6 282 67.4
Ca_21724_v3 Cicer arietinum L. HOM05D006393 ORTHO05D008088 7.6e-105 384.4 282 67.4
FAN23G0113 Fragaria x ananassa HOM05D006393 ORTHO05D008088 2.2e-104 382.9 288 68.4
VMungo1215G0586 Vigna mungo HOM05D006393 ORTHO05D008088 1.9e-103 379.8 283 67.1
THA.LOC104815111 Tarenaya hassleriana HOM05D006393 ORTHO05D008088 2.4e-103 379.4 286 67.1
Phvul.003G159300 Phaseolus vulgaris HOM05D006393 ORTHO05D008088 3.2e-103 379.0 282 66.3
Glyma.17G120200 Glycine max HOM05D006393 ORTHO05D008088 2.7e-102 375.9 284 68.3
Lsat_1_v5_gn_7_42880 Lactuca sativa HOM05D006393 ORTHO05D008088 3.5e-102 375.6 288 67.4
Eucgr.C04142 Eucalyptus grandis HOM05D006393 ORTHO05D008088 1.7e-101 373.2 251 70.5
Oeu046267.2 Olea europaea HOM05D006393 ORTHO05D008088 8.7e-101 370.9 426 50.2
Medtr4g112990 Medicago truncatula HOM05D006393 ORTHO05D008088 1.9e-100 369.8 282 64.2
AUR62011040 Chenopodium quinoa HOM05D006393 ORTHO05D008088 3.6e-99 365.5 264 68.9
Nitab4.5_0010615g0010 Nicotiana tabacum HOM05D006393 ORTHO05D008088 4.8e-99 365.2 249 72.3
MBI01_g13571_MAGBIO Magnolia biondii HOM05D006393 ORTHO05D008088 6.9e-98 361.3 283 66.4
Ah.14g081310 Amaranthus hybridus HOM05D006393 ORTHO05D008088 2.6e-97 359.4 348 56.9
CDE06G0973 Ceratophyllum demersum HOM05D006393 ORTHO05D008088 4.5e-97 358.6 279 64.5
MBI04_g35350_MAGBIO Magnolia biondii HOM05D006393 ORTHO05D008088 9.9e-97 357.5 249 70.7
Cc06_g09230 Coffea canephora HOM05D006393 ORTHO05D008088 7.1e-95 351.3 236 75.8
Peaxi162Scf00223g01425 Petunia axillaris HOM05D006393 ORTHO05D008088 9.3e-95 350.9 301 63.1
Os01g0507300 Oryza sativa ssp. japonica HOM05D006393 ORTHO05D008088 2.1e-94 349.7 279 62.4
HPP92_009792 Vanilla planifolia HOM05D006393 ORTHO05D008088 7.9e-94 347.8 288 60.1
Zm00001eb122440 Zea mays HOM05D006393 ORTHO05D008088 4.3e-92 342.0 273 63.7
HPP92_008697 Vanilla planifolia HOM05D006393 ORTHO05D008088 8.1e-91 337.8 279 60.9
Zm00001eb106640 Zea mays HOM05D006393 ORTHO05D008088 8.1e-91 337.8 279 58.1
ATR0083G026 Amborella trichopoda HOM05D006393 ORTHO05D008088 2.4e-90 336.3 279 62.0
Sc07g0007380 Simmondsia chinensis HOM05D006393 ORTHO05D008088 7.6e-89 331.3 236 69.5
Os01g0178200 Oryza sativa ssp. japonica HOM05D006393 ORTHO05D008088 5.5e-87 325.1 318 54.1
SEGI_37175 Sequoiadendron giganteum HOM05D006393 ORTHO05D008088 5.5e-87 325.1 279 58.1
ECA240G0151 Erigeron canadensis HOM05D006393 ORTHO05D008088 3.0e-85 319.3 221 71.5
SalBow7G4467 Salvia bowleyana HOM05D006393 ORTHO05D008088 1.1e-84 317.4 288 58.0
Dinv41564 Davidia involucrata HOM05D006752 ORTHO05D008088 2.0e-81 306.6 196 76.0
Mapoly0052s0018 Marchantia polymorpha HOM05D006393 ORTHO05D008088 1.4e-79 300.4 284 53.2
Pp3c12_24880 Physcomitrium patens HOM05D006393 ORTHO05D008088 3.6e-78 295.8 287 53.0
CARHR192920 Cardamine hirsuta HOM05D006393 ORTHO05D008088 1.8e-74 283.5 200 69.5
SMO340G0297 Selaginella moellendorffii HOM05D006393 ORTHO05D008088 1.8e-74 283.5 280 51.8
Oeu027539.2 Olea europaea HOM05D006393 ORTHO05D008088 5.9e-73 278.5 292 54.8
Peaxi162Scf00223g01424 Petunia axillaris HOM05D006393 ORTHO05D008088 3.8e-72 275.8 243 61.7
PRCOL_00002470 Prasinoderma coloniale HOM05D006393 ORTHO05D008088 6.1e-54 215.3 288 44.8
TAR636G2166 Trochodendron aralioides HOM05D006393 ORTHO05D008088 8.0e-54 214.9 146 72.6
Cre17.g726350 Chlamydomonas reinhardtii HOM05D006393 ORTHO05D008088 7.0e-50 201.8 328 39.6
CDE07G1479 Ceratophyllum demersum HOM05D006393 ORTHO05D008088 3.8e-48 196.1 155 60.0
SEGI_23420 Sequoiadendron giganteum HOM05D006393 ORTHO05D008088 1.1e-42 177.9 181 51.4
Psat6g218400 Pisum sativum HOM05D006393 ORTHO05D008088 5.5e-39 165.6 115 72.2
Cre02.g118200 Chlamydomonas reinhardtii HOM05D006393 ORTHO05D008088 1.2e-36 157.9 330 34.5
SEGI_36873 Sequoiadendron giganteum HOM05D006393 ORTHO05D008088 1.4e-34 151.0 181 49.7
Glyma.05G012000 Glycine max HOM05D006393 ORTHO05D008088 3.1e-34 149.8 117 69.2
MCO12G460 Micromonas commoda HOM05D006393 ORTHO05D008088 7.0e-34 148.7 172 50.0
Eucgr.L03082 Eucalyptus grandis HOM05D006393 ORTHO05D008088 2.0e-33 147.1 130 53.1
Psat5g214680 Pisum sativum HOM05D006393 ORTHO05D008088 5.2e-29 132.5 95 66.3
SEGI_10855 Sequoiadendron giganteum HOM05D006393 ORTHO05D008088 2.2e-27 127.1 180 42.2
Eucgr.E03680 Eucalyptus grandis HOM05D006393 ORTHO05D008088 2.3e-24 117.1 108 56.5
Zm00001eb342450 Zea mays HOM05D006393 ORTHO05D008088 3.6e-22 109.8 161 42.9
vmacro16552 Vaccinium macrocarpon HOM05D006393 ORTHO05D008088 2.7e-09 67.0 144 36.8
SEGI_30446 Sequoiadendron giganteum HOM05D006393 ORTHO05D000979 7.8e-09 65.5 51 62.7
TAR636G3545 Trochodendron aralioides HOM05D006393 ORTHO05D008088 3.0e-08 63.5 50 64.0
SEGI_14370 Sequoiadendron giganteum HOM05D006393 ORTHO05D008088 8.6e-08 62.0 51 58.8


User provided reference genes

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