Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_010372 Daucus carota HOM05D006558 ORTHO05D008424 3.4e-302 1040.8 509 100.0
QL04p014186 Quercus lobata HOM05D006558 ORTHO05D008424 6.3e-195 684.5 516 63.0
RcHm_v2.0_Chr1g0321321 Rosa chinensis HOM05D006558 ORTHO05D008424 1.5e-188 663.3 518 62.5
Gorai.010G217100 Gossypium raimondii HOM05D006558 ORTHO05D008424 3.7e-187 658.7 509 61.7
Prupe.2G031500 Prunus persica HOM05D006558 ORTHO05D008424 6.3e-187 657.9 521 62.0
Gohir.D06G185500 Gossypium hirsutum HOM05D006558 ORTHO05D008424 1.1e-186 657.1 509 61.9
GSVIVG01000827001 Vitis vinifera HOM05D006558 ORTHO05D008424 1.1e-186 657.1 509 63.5
FvH4_7g02620 Fragaria vesca HOM05D006558 ORTHO05D008424 3.1e-186 655.6 518 61.4
TAR633G1807 Trochodendron aralioides HOM05D006558 ORTHO05D008424 4.1e-186 655.2 522 60.9
Duzib106G1800 Durio zibethinus HOM05D006558 ORTHO05D008424 4.5e-185 651.7 507 60.4
Actinidia06260 Actinidia chinensis HOM05D006558 ORTHO05D008424 5.9e-185 651.4 515 62.7
CiPaw.13G011700 Carya illinoinensis HOM05D006558 ORTHO05D008424 1.7e-184 649.8 511 61.3
TWI15G0624 Tripterygium wilfordii HOM05D006558 ORTHO05D008424 6.5e-184 647.9 516 60.3
FAN01G2130 Fragaria x ananassa HOM05D006558 ORTHO05D008424 8.5e-184 647.5 533 60.2
Manes.12G022900 Manihot esculenta HOM05D006558 ORTHO05D008424 5.5e-183 644.8 514 58.6
FAN03G0498 Fragaria x ananassa HOM05D006558 ORTHO05D008424 1.6e-182 643.3 533 59.8
Ciclev10033512m.g Citrus clementina HOM05D006558 ORTHO05D008424 1.8e-181 639.8 510 60.0
Peaxi162Scf00516g00328 Petunia axillaris HOM05D006558 ORTHO05D008424 5.7e-180 634.8 508 59.6
Ca_25408_v3 Cicer arietinum L. HOM05D006558 ORTHO05D008424 1.3e-179 633.6 507 60.0
HanXRQChr02g0050141 Helianthus annuus HOM05D006558 ORTHO05D008424 2.2e-179 632.9 508 59.8
Psat5g217880 Pisum sativum HOM05D006558 ORTHO05D008424 2.2e-179 632.9 511 59.3
Lalb_Chr25g0282291 Lupinus albus HOM05D006558 ORTHO05D008424 2.8e-179 632.5 512 59.6
Cc07_g20890 Coffea canephora HOM05D006558 ORTHO05D008424 4.8e-179 631.7 519 59.9
Psat5g217480 Pisum sativum HOM05D006558 ORTHO05D008424 1.8e-178 629.8 510 59.2
SGA_v2.0_scaffold232G43518 Striga asiatica HOM05D006558 ORTHO05D008424 9.1e-178 627.5 519 58.0
TPR.G9868 Trifolium pratense HOM05D006558 ORTHO05D008424 9.1e-178 627.5 504 59.7
Lj9C648T3 Lonicera japonica HOM05D006558 ORTHO05D008424 2.6e-177 625.9 483 63.1
Oeu006113.1 Olea europaea HOM05D006558 ORTHO05D008424 7.7e-177 624.4 510 58.8
Sopen03g028230 Solanum pennellii HOM05D006558 ORTHO05D008424 6.5e-176 621.3 514 59.3
ECA248G1764 Erigeron canadensis HOM05D006558 ORTHO05D008424 8.5e-176 620.9 510 58.6
Lj3g0026268 Lotus japonicus HOM05D006558 ORTHO05D008424 9.4e-175 617.5 512 58.2
Rhsim07G0065000 Rhododendron simsii HOM05D006558 ORTHO05D008424 2.1e-174 616.3 566 56.0
Aqoxy2G03825 Aquilegia oxysepala HOM05D006558 ORTHO05D008424 2.7e-174 615.9 525 57.3
Solyc03g097460.3 Solanum lycopersicum HOM05D006558 ORTHO05D008424 3.6e-174 615.5 514 58.9
Potri.004G236000 Populus trichocarpa HOM05D006558 ORTHO05D008424 4.7e-174 615.1 510 59.2
Sc11g0006630 Simmondsia chinensis HOM05D006558 ORTHO05D008424 5.2e-173 611.7 510 58.0
CANSAT78G0292 Cannabis sativa HOM05D006558 ORTHO05D008424 8.8e-173 610.9 507 58.2
Nn7g37154 Nelumbo nucifera HOM05D006558 ORTHO05D008424 1.2e-172 610.5 521 58.7
VMungo0251G1905 Vigna mungo HOM05D006558 ORTHO05D008424 1.5e-172 610.1 514 58.9
CANSAT78G2064 Cannabis sativa HOM05D006558 ORTHO05D008424 2.6e-172 609.4 507 58.2
AUR62037214 Chenopodium quinoa HOM05D006558 ORTHO05D008424 1.3e-171 607.1 512 57.2
Phvul.002G285400 Phaseolus vulgaris HOM05D006558 ORTHO05D008424 1.7e-171 606.7 513 57.7
Aqoxy5G01848 Aquilegia oxysepala HOM05D006558 ORTHO05D008424 8.2e-171 604.4 519 58.0
AUR62026839 Chenopodium quinoa HOM05D006558 ORTHO05D008424 6.5e-168 594.7 512 56.4
Glyma.11G153500 Glycine max HOM05D006558 ORTHO05D008424 2.5e-167 592.8 513 56.5
CsaV3_5G011280 Cucumis sativus L. HOM05D006558 ORTHO05D008424 1.4e-165 587.0 510 56.5
Nitab4.5_0002530g0080 Nicotiana tabacum HOM05D006558 ORTHO05D008424 5.2e-165 585.1 517 56.5
Dinv00935 Davidia involucrata HOM05D006558 ORTHO05D008424 3.4e-164 582.4 400 69.8
Sed0005595 Sechium edule HOM05D006558 ORTHO05D008424 1.7e-163 580.1 508 55.7
Lsat_1_v5_gn_1_114420 Lactuca sativa HOM05D006558 ORTHO05D008424 3.7e-163 578.9 494 56.9
Nitab4.5_0000021g1060 Nicotiana tabacum HOM05D006558 ORTHO05D008424 3.7e-163 578.9 517 56.1
AL3G18860 Arabidopsis lyrata HOM05D006558 ORTHO05D008424 8.3e-163 577.8 513 53.2
PGR031G1286 Punica granatum HOM05D006558 ORTHO05D008424 3.1e-162 575.9 516 55.0
CAN.G732.14 Capsicum annuum HOM05D006558 ORTHO05D008424 4.1e-162 575.5 515 55.9
MELO3C016629.2 Cucumis melo HOM05D006558 ORTHO05D008424 7.0e-162 574.7 513 55.9
EL10Ac2g02834 Beta vulgaris HOM05D006558 ORTHO05D009340 9.1e-162 574.3 510 55.3
SHI03978 Sapria himalayana HOM05D006558 ORTHO05D005892 4.5e-161 572.0 507 54.8
MBI13_g29518_MAGBIO Magnolia biondii HOM05D006558 ORTHO05D008424 5.9e-161 571.6 525 55.6
AT3G07530 Arabidopsis thaliana HOM05D006558 ORTHO05D008424 3.8e-160 568.9 512 52.5
Ca_25460_v3 Cicer arietinum L. HOM05D006558 ORTHO05D008424 3.8e-160 568.9 467 59.3
THA.LOC104826716 Tarenaya hassleriana HOM05D006558 ORTHO05D008424 5.0e-160 568.5 514 54.9
Carub.0003s0708 Capsella rubella HOM05D006558 ORTHO05D008424 6.1e-158 561.6 520 52.5
BcaC05g29545 Brassica carinata HOM05D006558 ORTHO05D008424 2.0e-156 556.6 510 52.4
Thhalv10020176m.g Eutrema salsugineum HOM05D006558 ORTHO05D008424 4.4e-156 555.4 509 51.9
Atru.chr11.2434 Acer truncatum HOM05D006558 ORTHO05D008424 5.7e-156 555.1 462 58.9
Sp3g06440 Schrenkiella parvula HOM05D006558 ORTHO05D008424 6.3e-155 551.6 516 51.7
CARHR082190 Cardamine hirsuta HOM05D006558 ORTHO05D008424 1.8e-154 550.1 508 51.8
Ah.10g030940 Amaranthus hybridus HOM05D006558 ORTHO05D008424 2.0e-153 546.6 512 52.3
BraA05t22799Z Brassica rapa HOM05D006558 ORTHO05D008424 3.3e-151 539.3 522 51.0
Aa31LG10G8390 Aethionema arabicum HOM05D006558 ORTHO05D008424 1.2e-150 537.3 513 51.7
BolC5t34633H Brassica oleracea HOM05D006558 ORTHO05D008424 2.1e-150 536.6 522 50.4
arahy.Tifrunner.gnm1.ann1.898F3G Arachis hypogaea HOM05D006558 ORTHO05D008424 6.8e-149 531.6 493 53.8
Thecc.10G170400 Theobroma cacao HOM05D006558 ORTHO05D008424 1.7e-147 526.9 442 58.6
C05p59790 Brassica napus HOM05D006558 ORTHO05D008424 3.7e-147 525.8 492 51.8
A05p40680 Brassica napus HOM05D006558 ORTHO05D008424 1.4e-146 523.9 492 51.8
Cpa.g.sc96.50 Carica papaya HOM05D006558 ORTHO05D008424 1.9e-146 523.5 446 58.1
Haze_03062 Corylus avellana HOM05D006558 ORTHO05D008424 2.8e-142 509.6 425 58.4
MD00G1214500 Malus domestica HOM05D006558 ORTHO05D008424 2.3e-141 506.5 387 62.3
Migut.K00935 Erythranthe guttata HOM05D006558 ORTHO05D008424 3.4e-140 502.7 505 53.9
PSO675G8563 Papaver somniferum HOM05D006558 ORTHO05D008424 1.3e-139 500.7 510 49.4
HPP92_012099 Vanilla planifolia HOM05D006558 ORTHO05D008424 8.3e-139 498.0 516 48.3
Sabra01G0180400 Salix brachista HOM05D006558 ORTHO05D008424 1.6e-137 493.8 443 56.7
unitig_32.g11142 Utricularia gibba HOM05D006558 ORTHO05D008424 1.3e-123 447.6 516 47.3
Dinv09252 Davidia involucrata HOM05D006558 ORTHO05D008424 2.4e-114 416.8 350 60.3
arahy.Tifrunner.gnm1.ann1.S73JQ5 Arachis hypogaea HOM05D006558 ORTHO05D008424 5.3e-109 399.1 370 52.4
vmacro13739 Vaccinium macrocarpon HOM05D006558 ORTHO05D008424 2.1e-105 387.1 331 56.8
Medtr3g019010 Medicago truncatula HOM05D006558 ORTHO05D008424 2.9e-99 366.7 311 58.2
Hund15718 Selenicereus undatus HOM05D006558 ORTHO05D008424 2.9e-99 366.7 453 44.4
PGSC0003DMG400031735 Solanum tuberosum HOM05D006558 ORTHO05D008424 3.2e-98 363.2 303 59.1
ATR1093G023 Amborella trichopoda HOM05D006558 ORTHO05D008424 7.1e-90 335.5 325 49.2
Zm00001eb143980 Zea mays HOM05D006558 ORTHO05D008424 9.7e-87 325.1 308 50.3
CDE05G1491 Ceratophyllum demersum HOM05D006558 ORTHO05D008424 3.4e-84 316.6 482 38.2
Gohir.A06G175900 Gossypium hirsutum HOM05D006558 ORTHO05D008424 5.9e-84 315.8 245 60.4
Gohir.A06G175902 Gossypium hirsutum HOM05D006558 ORTHO05D008424 9.4e-82 308.5 230 64.3
AagrBONN_evm.TU.Sc2ySwM_228.965 Anthoceros agrestis HOM05D006558 ORTHO05D008424 1.4e-80 304.7 558 33.3
Mapoly0001s0524 Marchantia polymorpha HOM05D006558 ORTHO05D008424 1.3e-78 298.1 633 32.1
SMO229G0006 Selaginella moellendorffii HOM05D006558 ORTHO05D008424 7.2e-74 282.3 496 35.5
SMO144G0043 Selaginella moellendorffii HOM05D006558 ORTHO05D008424 3.6e-73 280.0 496 35.3
Pp3c9_4730 Physcomitrium patens HOM05D006558 ORTHO05D008424 4.8e-70 269.6 640 31.1
MD07G1035100 Malus domestica HOM05D006558 ORTHO05D008424 2.0e-68 264.2 207 64.3
AL908U10010 Arabidopsis lyrata HOM05D006558 ORTHO05D008424 1.0e-64 251.9 190 57.4
COL.COLO4_35437 Corchorus olitorius HOM05D006558 ORTHO05D008424 2.3e-64 250.8 392 36.2
Eucgr.H05132 Eucalyptus grandis HOM05D006558 ORTHO05D008424 1.1e-61 241.9 477 34.6
Atru.chr11.2476 Acer truncatum HOM05D006558 ORTHO05D008424 9.1e-61 238.8 186 62.9
SEGI_06522 Sequoiadendron giganteum HOM05D006558 ORTHO05D008424 2.2e-51 207.6 181 52.5
Cc02_g29630 Coffea canephora HOM05D006558 ORTHO05D008424 7.2e-42 176.0 132 59.8
SEGI_00327 Sequoiadendron giganteum HOM05D006558 ORTHO05D008424 9.5e-42 175.6 160 50.0
Eucgr.H05129 Eucalyptus grandis HOM05D006558 ORTHO05D008424 1.7e-35 154.8 147 55.8
CBR_g72661 Chara braunii HOM05D000019 ORTHO05D000353 1.1e-34 152.1 314 33.8
Medtr3g019025 Medicago truncatula HOM05D006558 ORTHO05D008424 8.9e-32 142.5 89 70.8
Os03g0243200 Oryza sativa ssp. japonica HOM05D006558 ORTHO05D008424 7.8e-28 129.4 205 39.0
Eucgr.H05138 Eucalyptus grandis HOM05D006558 ORTHO05D008424 4.3e-26 123.6 112 56.2
MD00G1214400 Malus domestica HOM05D006558 ORTHO05D008424 8.0e-25 119.4 109 57.8
SGA_v2.0_scaffold2G00943 Striga asiatica HOM05D006558 ORTHO05D008424 1.2e-23 115.5 178 42.1
SEGI_36037 Sequoiadendron giganteum HOM05D006558 ORTHO05D008424 5.1e-19 100.1 265 27.9
Ca_02010_v3 Cicer arietinum L. HOM05D006558 ORTHO05D008424 5.2e-16 90.1 59 64.4
CAN.G261.15 Capsicum annuum HOM05D003152 ORTHO05D034019 6.0e-12 76.6 44 70.5
Medtr3g019030 Medicago truncatula HOM05D006558 ORTHO05D034019 1.7e-11 75.1 43 69.8
Nn7g37167 Nelumbo nucifera HOM05D006558 ORTHO05D008424 1.2e-09 68.9 51 58.8
Sopen05g017900 Solanum pennellii HOM05D028470 ORTHO05D037706 6.2e-09 66.6 87 36.8
Rhsim12G0031700 Rhododendron simsii HOM05D000017 ORTHO05D000013 3.1e-08 64.3 95 40.0
Solyc05g150129.1 Solanum lycopersicum HOM05D006558 ORTHO05D008424 4.0e-08 63.9 62 45.2
MBI08_g18916_MAGBIO Magnolia biondii HOM05D000017 ORTHO05D000013 3.4e-07 60.8 102 37.3
Nitab4.5_0004439g0160 Nicotiana tabacum HOM05D002159 ORTHO05D005625 3.8e-06 57.4 400 20.5
Thhalv10003707m.g Eutrema salsugineum HOM05D002159 ORTHO05D005625 6.4e-06 56.6 147 27.9


User provided reference genes

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