Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_010338 Daucus carota HOM05D005110 ORTHO05D006074 4.4e-95 351.3 177 100.0
DCAR_012208 Daucus carota HOM05D005110 ORTHO05D006074 4.7e-57 224.9 179 64.8
Dinv22825 Davidia involucrata HOM05D005110 ORTHO05D006074 1.4e-56 223.4 179 63.7
Dinv42535 Davidia involucrata HOM05D005110 ORTHO05D006074 1.1e-53 213.8 179 60.3
Duzib150G1383 Durio zibethinus HOM05D005110 ORTHO05D006074 2.5e-50 202.6 179 59.2
Hma1.2p1_0587F.1_g184070 Hydrangea macrophylla HOM05D005110 ORTHO05D006074 7.3e-50 201.1 178 57.3
Actinidia37076 Actinidia chinensis HOM05D005110 ORTHO05D006074 4.7e-49 198.4 178 57.9
CSS0022586 Camellia sinensis var. sinensis HOM05D005110 ORTHO05D006074 4.7e-49 198.4 180 56.7
Thecc.09G280200 Theobroma cacao HOM05D005110 ORTHO05D006074 1.1e-48 197.2 179 56.4
GSVIVG01036094001 Vitis vinifera HOM05D005110 ORTHO05D006074 1.1e-48 197.2 177 58.8
Duzib170G1118 Durio zibethinus HOM05D005110 ORTHO05D006074 3.1e-48 195.7 180 56.1
Duzib168G1438 Durio zibethinus HOM05D005110 ORTHO05D006074 1.5e-47 193.4 175 60.0
Rhsim01G0204600 Rhododendron simsii HOM05D005110 ORTHO05D006074 2.0e-47 193.0 182 56.6
Potri.009G019300 Populus trichocarpa HOM05D005110 ORTHO05D006074 2.6e-47 192.6 177 57.1
COL.COLO4_34021 Corchorus olitorius HOM05D005110 ORTHO05D006074 1.3e-46 190.3 179 57.0
ECA248G3565 Erigeron canadensis HOM05D005110 ORTHO05D006074 6.4e-46 188.0 179 54.7
MD03G1148100 Malus domestica HOM05D005110 ORTHO05D006074 6.4e-46 188.0 179 55.3
Glyma.12G091100 Glycine max HOM05D005110 ORTHO05D006074 8.4e-46 187.6 177 57.1
Atru.chr3.3190 Acer truncatum HOM05D005110 ORTHO05D006074 1.1e-45 187.2 182 53.8
MD11G1167600 Malus domestica HOM05D005110 ORTHO05D006074 1.4e-45 186.8 179 55.9
FvH4_3g25370 Fragaria vesca HOM05D005110 ORTHO05D006074 5.4e-45 184.9 174 56.9
FAN21G3897 Fragaria x ananassa HOM05D005110 ORTHO05D006074 5.4e-45 184.9 174 56.9
Sabra09G0012800 Salix brachista HOM05D005110 ORTHO05D006074 7.1e-45 184.5 178 56.2
Cfa009996 Carpinus fangiana HOM05D005110 ORTHO05D006074 1.2e-44 183.7 180 56.1
Prupe.6G134300 Prunus persica HOM05D005110 ORTHO05D006074 1.2e-44 183.7 179 57.5
FAN25G3715 Fragaria x ananassa HOM05D005110 ORTHO05D006074 1.6e-44 183.3 174 56.9
Rhsim13G0112900 Rhododendron simsii HOM05D005110 ORTHO05D006074 2.1e-44 183.0 186 54.3
FAN11G1413 Fragaria x ananassa HOM05D005110 ORTHO05D006074 2.7e-44 182.6 174 56.3
QL01p011992 Quercus lobata HOM05D005110 ORTHO05D006074 2.7e-44 182.6 179 53.1
vmacro14345 Vaccinium macrocarpon HOM05D005110 ORTHO05D006074 2.7e-44 182.6 191 54.5
Actinidia25117 Actinidia chinensis HOM05D005110 ORTHO05D006074 7.8e-44 181.0 183 54.6
Lj3g0002892 Lotus japonicus HOM05D005110 ORTHO05D006074 1.0e-43 180.6 177 54.8
Cc01_g08910 Coffea canephora HOM05D005110 ORTHO05D006074 1.7e-43 179.9 180 51.1
Oeu035569.1 Olea europaea HOM05D005110 ORTHO05D006074 1.7e-43 179.9 176 54.0
Oeu027156.1 Olea europaea HOM05D005110 ORTHO05D006074 2.3e-43 179.5 181 54.1
MSTRG.21034 Avicennia marina HOM05D005110 ORTHO05D006074 3.0e-43 179.1 179 55.3
Glyma.11G182100 Glycine max HOM05D005110 ORTHO05D006074 3.0e-43 179.1 178 56.2
Gohir.A05G079700 Gossypium hirsutum HOM05D005110 ORTHO05D006074 3.0e-43 179.1 179 53.6
SGA_v2.0_scaffold22G09852 Striga asiatica HOM05D005110 ORTHO05D006074 3.9e-43 178.7 178 50.6
Oeu002365.1 Olea europaea HOM05D005110 ORTHO05D006074 6.6e-43 177.9 181 54.1
Ciclev10029378m.g Citrus clementina HOM05D005110 ORTHO05D006074 8.7e-43 177.6 182 56.0
HanXRQChr01g0024471 Helianthus annuus HOM05D005110 ORTHO05D006074 8.7e-43 177.6 180 54.4
Lsat_1_v5_gn_1_59041 Lactuca sativa HOM05D005110 ORTHO05D006074 8.7e-43 177.6 180 53.9
Medtr2g086680 Medicago truncatula HOM05D005110 ORTHO05D006074 1.1e-42 177.2 177 52.5
QL01p011978 Quercus lobata HOM05D005110 ORTHO05D006074 1.1e-42 177.2 180 53.3
Glyma.13G315400 Glycine max HOM05D005110 ORTHO05D006074 1.9e-42 176.4 179 54.2
Gohir.D05G082600 Gossypium hirsutum HOM05D005110 ORTHO05D006074 1.9e-42 176.4 180 51.7
Gorai.009G084200 Gossypium raimondii HOM05D005110 ORTHO05D006074 1.9e-42 176.4 180 51.7
PGSC0003DMG400005884 Solanum tuberosum HOM05D005110 ORTHO05D006074 2.5e-42 176.0 178 52.2
Psat7g142160 Pisum sativum HOM05D005110 ORTHO05D006074 3.3e-42 175.6 177 54.8
MSTRG.18766 Avicennia marina HOM05D005110 ORTHO05D006074 4.3e-42 175.3 179 51.4
TWI79G0870 Tripterygium wilfordii HOM05D005110 ORTHO05D006074 4.3e-42 175.3 178 52.8
arahy.Tifrunner.gnm1.ann1.EYNG7S Arachis hypogaea HOM05D005110 ORTHO05D006074 5.6e-42 174.9 178 55.6
Lalb_Chr03g0028181 Lupinus albus HOM05D005110 ORTHO05D006074 5.6e-42 174.9 177 54.8
SalBow6G3038 Salvia bowleyana HOM05D005110 ORTHO05D006074 9.6e-42 174.1 176 51.1
CAN.G919.35 Capsicum annuum HOM05D005110 ORTHO05D006074 1.3e-41 173.7 179 50.8
CANSAT54G0919 Cannabis sativa HOM05D005110 ORTHO05D006074 1.6e-41 173.3 179 51.4
Lj3g0016581 Lotus japonicus HOM05D005110 ORTHO05D006074 1.6e-41 173.3 180 55.0
Phvul.011G095400 Phaseolus vulgaris HOM05D005110 ORTHO05D006074 1.6e-41 173.3 177 53.7
HanXRQChr13g0426031 Helianthus annuus HOM05D005110 ORTHO05D006074 2.1e-41 172.9 179 53.6
Sopen06g030680 Solanum pennellii HOM05D005110 ORTHO05D006074 3.6e-41 172.2 178 52.2
arahy.Tifrunner.gnm1.ann1.XFIF97 Arachis hypogaea HOM05D005110 ORTHO05D006074 4.8e-41 171.8 178 55.6
CiPaw.14G098700 Carya illinoinensis HOM05D005110 ORTHO05D006074 4.8e-41 171.8 178 51.1
Lalb_Chr01g0004911 Lupinus albus HOM05D005110 ORTHO05D006074 4.8e-41 171.8 177 53.7
vmacro03324 Vaccinium macrocarpon HOM05D005110 ORTHO05D006074 4.8e-41 171.8 179 51.4
Eucgr.B03836 Eucalyptus grandis HOM05D005110 ORTHO05D006074 1.1e-40 170.6 192 49.5
Migut.D02434 Erythranthe guttata HOM05D005110 ORTHO05D006074 1.8e-40 169.9 183 50.3
MBI17_g32417_MAGBIO Magnolia biondii HOM05D005110 ORTHO05D006074 4.0e-40 168.7 181 50.8
Solyc06g074260.4 Solanum lycopersicum HOM05D005110 ORTHO05D006074 5.3e-40 168.3 178 51.7
TPR.G17227 Trifolium pratense HOM05D005110 ORTHO05D006074 5.3e-40 168.3 177 52.5
CSS0002660 Camellia sinensis var. sinensis HOM05D005110 ORTHO05D006074 6.9e-40 167.9 180 52.8
Nn2g14215 Nelumbo nucifera HOM05D005110 ORTHO05D006074 1.2e-39 167.2 184 50.0
TWI31G0848 Tripterygium wilfordii HOM05D005110 ORTHO05D006074 1.2e-39 167.2 178 52.8
CiPaw.13G134200 Carya illinoinensis HOM05D005110 ORTHO05D006074 2.6e-39 166.0 176 50.6
Phvul.005G122600 Phaseolus vulgaris HOM05D005110 ORTHO05D006074 3.4e-39 165.6 179 49.7
VMungo1127G0906 Vigna mungo HOM05D005110 ORTHO05D006074 9.9e-39 164.1 174 52.3
Peaxi162Scf00091g00622 Petunia axillaris HOM05D005110 ORTHO05D006074 1.7e-38 163.3 184 52.2
Psat5g259000 Pisum sativum HOM05D005110 ORTHO05D006074 3.8e-38 162.2 178 47.8
Lalb_Chr19g0136401 Lupinus albus HOM05D005110 ORTHO05D006074 4.9e-38 161.8 175 52.0
PGR102G3267 Punica granatum HOM05D005110 ORTHO05D006074 4.9e-38 161.8 179 51.4
Nitab4.5_0005472g0010 Nicotiana tabacum HOM05D005110 ORTHO05D006074 6.4e-38 161.4 175 49.1
VMungo1080G1295 Vigna mungo HOM05D005110 ORTHO05D006074 2.4e-37 159.5 177 48.6
Aqoxy4G02728 Aquilegia oxysepala HOM05D005110 ORTHO05D006074 3.2e-37 159.1 180 52.2
Manes.11G163300 Manihot esculenta HOM05D005110 ORTHO05D006074 3.2e-37 159.1 179 50.8
Hund18768 Selenicereus undatus HOM05D005110 ORTHO05D006074 4.2e-37 158.7 170 50.0
Nitab4.5_0000937g0070 Nicotiana tabacum HOM05D005110 ORTHO05D006074 5.4e-37 158.3 171 49.7
Cpa.g.sc195.13 Carica papaya HOM05D005110 ORTHO05D006074 4.6e-36 155.2 156 51.9
Sc06g0008710 Simmondsia chinensis HOM05D005110 ORTHO05D006074 1.5e-34 150.2 177 45.8
CsaV3_1G014930 Cucumis sativus L. HOM05D005110 ORTHO05D006074 3.6e-33 145.6 169 44.4
CsaV3_1G015850 Cucumis sativus L. HOM05D005110 ORTHO05D006074 3.6e-33 145.6 169 44.4
QL01p011973 Quercus lobata HOM05D005110 ORTHO05D006074 6.2e-33 144.8 179 46.4
ClCG01G012070 Citrullus lanatus HOM05D005110 ORTHO05D006074 5.3e-32 141.7 184 43.5
ClCG02G022270 Citrullus lanatus HOM05D005110 ORTHO05D006074 9.0e-32 141.0 182 46.7
MSTRG.17701 Avicennia marina HOM05D005110 ORTHO05D006074 1.5e-31 140.2 174 47.1
arahy.Tifrunner.gnm1.ann1.NUG06Z Arachis hypogaea HOM05D005110 ORTHO05D006074 2.2e-30 136.3 180 46.1
arahy.Tifrunner.gnm1.ann1.GADS7N Arachis hypogaea HOM05D005110 ORTHO05D006074 2.9e-30 136.0 178 44.4
Sed0010097 Sechium edule HOM05D005110 ORTHO05D006074 2.9e-30 136.0 188 43.6
C02p10870 Brassica napus HOM05D005110 ORTHO05D006074 3.8e-30 135.6 178 46.6
Lj2P968T16 Lonicera japonica HOM05D005110 ORTHO05D006074 1.9e-29 133.3 121 57.9
THA.LOC104800521 Tarenaya hassleriana HOM05D005110 ORTHO05D006074 1.9e-29 133.3 182 45.6
CARHR119990 Cardamine hirsuta HOM05D005110 ORTHO05D006074 4.2e-29 132.1 171 43.9
Thhalv10002110m.g Eutrema salsugineum HOM05D005110 ORTHO05D006074 9.3e-29 131.0 155 46.5
MELO3C004693.2 Cucumis melo HOM05D005110 ORTHO05D006074 1.2e-28 130.6 185 42.7
CARHR191100 Cardamine hirsuta HOM05D005110 ORTHO05D006074 3.5e-28 129.0 179 46.4
AL6G33450 Arabidopsis lyrata HOM05D005110 ORTHO05D006074 7.9e-28 127.9 173 45.1
BcaB05g22726 Brassica carinata HOM05D005110 ORTHO05D006074 1.0e-27 127.5 173 45.7
BraA02t05659Z Brassica rapa HOM05D005110 ORTHO05D006074 1.0e-27 127.5 173 45.7
AL4G21340 Arabidopsis lyrata HOM05D005110 ORTHO05D006074 1.3e-27 127.1 171 43.9
AT2G27385 Arabidopsis thaliana HOM05D005110 ORTHO05D006074 1.3e-27 127.1 171 43.3
Thhalv10014830m.g Eutrema salsugineum HOM05D005110 ORTHO05D006074 1.3e-27 127.1 173 44.5
AT5G22430 Arabidopsis thaliana HOM05D005110 ORTHO05D006074 1.8e-27 126.7 172 45.9
Sp6g22820 Schrenkiella parvula HOM05D005110 ORTHO05D006074 1.8e-27 126.7 171 45.0
Sp4g10180 Schrenkiella parvula HOM05D005110 ORTHO05D006074 3.9e-27 125.6 156 43.6
TAR369G1010 Trochodendron aralioides HOM05D005110 ORTHO05D006074 3.9e-27 125.6 125 56.0
BcaB02g10088 Brassica carinata HOM05D005110 ORTHO05D006074 5.1e-27 125.2 155 43.9
BcaB08g36432 Brassica carinata HOM05D000477 ORTHO05D006074 5.1e-27 125.2 181 46.4
BolC2t07157H Brassica oleracea HOM05D005110 ORTHO05D006074 5.1e-27 125.2 173 45.7
BraA07t29533Z Brassica rapa HOM05D005110 ORTHO05D006074 5.1e-27 125.2 176 42.0
CsaV3_6G038400 Cucumis sativus L. HOM05D005110 ORTHO05D006074 5.1e-27 125.2 161 45.3
Carub.0004s0802 Capsella rubella HOM05D005110 ORTHO05D006074 6.7e-27 124.8 180 41.7
A07p18150 Brassica napus HOM05D005110 ORTHO05D006074 8.7e-27 124.4 176 42.0
C04p24220 Brassica napus HOM05D005110 ORTHO05D006074 1.1e-26 124.0 176 42.0
BolC4t23920H Brassica oleracea HOM05D005110 ORTHO05D006074 1.1e-26 124.0 176 42.0
MELO3C014504.2 Cucumis melo HOM05D005110 ORTHO05D006074 1.1e-26 124.0 161 44.1
TAR623G0362 Trochodendron aralioides HOM05D005110 ORTHO05D006074 1.5e-26 123.6 131 51.1
Aa31LG1G13130 Aethionema arabicum HOM05D005110 ORTHO05D006074 1.9e-26 123.2 173 43.9
BNapus_Darmor_BZH_scaffold_38p00660 Brassica napus HOM05D005110 ORTHO05D006074 1.9e-26 123.2 173 43.4
BcaC02g10869 Brassica carinata HOM05D005110 ORTHO05D006074 5.6e-26 121.7 176 41.5
Carub.0006s2017 Capsella rubella HOM05D005110 ORTHO05D006074 2.8e-25 119.4 173 42.8
THA.LOC104810920 Tarenaya hassleriana HOM05D005110 ORTHO05D006074 6.2e-25 118.2 179 42.5
BcaC03g13883 Brassica carinata HOM05D005110 ORTHO05D006074 9.0e-24 114.4 154 45.5
Hund20930 Selenicereus undatus HOM05D005110 ORTHO05D006074 2.6e-23 112.8 135 47.4
unitig_746.g26607 Utricularia gibba HOM05D005110 ORTHO05D006074 1.0e-19 100.9 165 38.8
Manes.04G002101 Manihot esculenta HOM05D005110 ORTHO05D006074 1.8e-19 100.1 120 42.5
ATR0580G107 Amborella trichopoda HOM05D005110 ORTHO05D006074 3.0e-19 99.4 185 36.2
HPP92_011908 Vanilla planifolia HOM05D005110 ORTHO05D006074 3.0e-19 99.4 116 47.4
Haze_23356 Corylus avellana HOM05D005110 ORTHO05D006074 4.3e-18 95.5 102 51.0
vmacro14354 Vaccinium macrocarpon HOM05D005110 ORTHO05D006074 5.3e-16 88.6 110 48.2
HPP92_005471 Vanilla planifolia HOM05D005110 ORTHO05D006074 1.2e-15 87.4 193 32.6
Actinidia35470 Actinidia chinensis HOM05D005110 ORTHO05D006074 2.0e-15 86.7 124 41.9
TPR.G4458 Trifolium pratense HOM05D005110 ORTHO05D006074 2.3e-11 73.2 68 52.9
C09p54160 Brassica napus HOM05D005110 ORTHO05D006074 3.9e-11 72.4 178 33.7
BolC9t58287H Brassica oleracea HOM05D005110 ORTHO05D006074 5.1e-11 72.0 178 33.7
Zm00001eb242880 Zea mays HOM05D005110 ORTHO05D006074 1.1e-10 70.9 211 31.3


User provided reference genes

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