Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_010274 Daucus carota HOM05D007108 ORTHO05D009128 4.9e-131 471.1 229 100.0
FvH4_2g14420 Fragaria vesca HOM05D007108 ORTHO05D009128 3.2e-98 362.1 195 84.6
RcHm_v2.0_Chr6g0276751 Rosa chinensis HOM05D007108 ORTHO05D009128 8.7e-96 354.0 195 83.1
Lj1g0003350 Lotus japonicus HOM05D007108 ORTHO05D009128 1.3e-94 350.1 193 83.4
QL02p024940 Quercus lobata HOM05D007108 ORTHO05D009128 1.6e-94 349.7 199 80.9
TPR.G18750 Trifolium pratense HOM05D007108 ORTHO05D009128 3.7e-94 348.6 195 83.6
Sed0009335 Sechium edule HOM05D007108 ORTHO05D009128 4.8e-94 348.2 198 79.8
TAR628G0410 Trochodendron aralioides HOM05D007108 ORTHO05D009128 6.3e-94 347.8 199 82.4
Sopen04g026870 Solanum pennellii HOM05D007108 ORTHO05D009128 8.2e-94 347.4 223 76.2
MD05G1017900 Malus domestica HOM05D007108 ORTHO05D009128 1.1e-93 347.1 216 75.9
Ciclev10002261m.g Citrus clementina HOM05D007108 ORTHO05D009128 1.4e-93 346.7 220 74.1
CAN.G1564.2 Capsicum annuum HOM05D007108 ORTHO05D009128 1.8e-93 346.3 195 82.1
vmacro13384 Vaccinium macrocarpon HOM05D007108 ORTHO05D009128 1.8e-93 346.3 223 75.3
Nn5g28655 Nelumbo nucifera HOM05D007108 ORTHO05D009128 2.4e-93 345.9 229 73.4
Medtr3g090490 Medicago truncatula HOM05D007108 ORTHO05D009128 3.1e-93 345.5 194 82.5
Glyma.04G239800 Glycine max HOM05D007108 ORTHO05D009128 4.1e-93 345.1 193 81.9
ClCG09G009870 Citrullus lanatus HOM05D007108 ORTHO05D009128 5.3e-93 344.7 222 74.3
Rhsim07G0025600 Rhododendron simsii HOM05D007108 ORTHO05D009128 6.9e-93 344.4 222 75.7
CANSAT25G1119 Cannabis sativa HOM05D007108 ORTHO05D009128 9.0e-93 344.0 219 75.8
CsaV3_7G024840 Cucumis sativus L. HOM05D007108 ORTHO05D009128 9.0e-93 344.0 195 81.0
Prupe.8G021900 Prunus persica HOM05D007108 ORTHO05D009128 9.0e-93 344.0 216 74.5
CSS0020358 Camellia sinensis var. sinensis HOM05D007108 ORTHO05D009128 1.2e-92 343.6 239 69.9
Thecc.08G146100 Theobroma cacao HOM05D007108 ORTHO05D009128 1.2e-92 343.6 194 82.5
Peaxi162Scf00263g00613 Petunia axillaris HOM05D007108 ORTHO05D009128 1.5e-92 343.2 195 81.0
Gohir.A05G242100 Gossypium hirsutum HOM05D007108 ORTHO05D009128 2.0e-92 342.8 229 74.2
Actinidia29517 Actinidia chinensis HOM05D007108 ORTHO05D009128 2.6e-92 342.4 195 81.5
Aqoxy5G02215 Aquilegia oxysepala HOM05D007108 ORTHO05D009128 2.6e-92 342.4 200 80.0
Ca_16662_v3 Cicer arietinum L. HOM05D007108 ORTHO05D009128 3.4e-92 342.0 191 82.7
Eucgr.F02729 Eucalyptus grandis HOM05D007108 ORTHO05D009128 3.4e-92 342.0 233 71.7
Gorai.009G252700 Gossypium raimondii HOM05D007108 ORTHO05D009128 3.4e-92 342.0 206 79.6
VMungo1309G2491 Vigna mungo HOM05D007108 ORTHO05D009128 3.4e-92 342.0 194 80.9
Haze_17721 Corylus avellana HOM05D007108 ORTHO05D009128 5.9e-92 341.3 230 72.2
Sc02g0004350 Simmondsia chinensis HOM05D007108 ORTHO05D009128 5.9e-92 341.3 199 78.9
CSS0038886 Camellia sinensis var. sinensis HOM05D007108 ORTHO05D009128 7.7e-92 340.9 239 69.9
TWI34G1539 Tripterygium wilfordii HOM05D007108 ORTHO05D009128 7.7e-92 340.9 191 83.2
Gohir.D05G243400 Gossypium hirsutum HOM05D007108 ORTHO05D009128 1.0e-91 340.5 229 73.8
THA.LOC104812052 Tarenaya hassleriana HOM05D007108 ORTHO05D009128 1.0e-91 340.5 210 76.7
Solyc04g064930.3 Solanum lycopersicum HOM05D007108 ORTHO05D009128 1.3e-91 340.1 223 74.9
GSVIVG01010051001 Vitis vinifera HOM05D007108 ORTHO05D009128 1.7e-91 339.7 231 73.6
Thhalv10008558m.g Eutrema salsugineum HOM05D007108 ORTHO05D009128 2.2e-91 339.3 225 71.1
Glyma.06G124100 Glycine max HOM05D007108 ORTHO05D009128 2.2e-91 339.3 191 81.7
Carub.0001s2075 Capsella rubella HOM05D007108 ORTHO05D009128 5.0e-91 338.2 214 73.8
CARHR021740 Cardamine hirsuta HOM05D007108 ORTHO05D009128 5.0e-91 338.2 225 72.4
Lalb_Chr11g0066481 Lupinus albus HOM05D007108 ORTHO05D009128 5.0e-91 338.2 221 73.8
Phvul.009G136100 Phaseolus vulgaris HOM05D007108 ORTHO05D009128 5.0e-91 338.2 194 78.9
Sp1g18900 Schrenkiella parvula HOM05D007108 ORTHO05D009128 5.0e-91 338.2 225 72.0
MSTRG.1369 Avicennia marina HOM05D007108 ORTHO05D009128 6.5e-91 337.8 235 71.9
AL1G34450 Arabidopsis lyrata HOM05D007108 ORTHO05D009128 1.4e-90 336.7 194 79.4
Aa31LG7G5350 Aethionema arabicum HOM05D007108 ORTHO05D009128 2.5e-90 335.9 233 70.0
Manes.18G088801 Manihot esculenta HOM05D007108 ORTHO05D009128 3.2e-90 335.5 195 80.0
Atru.chr13.2257 Acer truncatum HOM05D007108 ORTHO05D009128 7.2e-90 334.3 222 72.5
BcaB07g32123 Brassica carinata HOM05D007108 ORTHO05D009128 7.2e-90 334.3 224 71.4
Duzib116G0089 Durio zibethinus HOM05D007108 ORTHO05D009128 7.2e-90 334.3 224 72.8
Migut.C01030 Erythranthe guttata HOM05D007108 ORTHO05D009128 7.2e-90 334.3 209 76.6
BcaC05g26041 Brassica carinata HOM05D007108 ORTHO05D009128 9.4e-90 334.0 227 70.9
Potri.002G071000 Populus trichocarpa HOM05D007108 ORTHO05D009128 1.2e-89 333.6 195 77.9
Cc10_g14220 Coffea canephora HOM05D007108 ORTHO05D009128 4.6e-89 331.6 200 77.0
BolC5t30716H Brassica oleracea HOM05D007108 ORTHO05D009128 6.1e-89 331.3 227 70.5
BraA06t24837Z Brassica rapa HOM05D007108 ORTHO05D009128 7.9e-89 330.9 222 70.7
AT1G21350 Arabidopsis thaliana HOM05D007108 ORTHO05D009128 1.4e-88 330.1 194 78.4
A06p17400 Brassica napus HOM05D007108 ORTHO05D009128 1.4e-88 330.1 222 70.7
HanXRQChr16g0500661 Helianthus annuus HOM05D007108 ORTHO05D009128 5.1e-88 328.2 223 72.6
ECA232G2155 Erigeron canadensis HOM05D007108 ORTHO05D009128 8.8e-88 327.4 195 76.9
PSO063G1249 Papaver somniferum HOM05D007108 ORTHO05D009128 8.8e-88 327.4 221 72.9
Oeu000778.2 Olea europaea HOM05D007108 ORTHO05D009128 1.1e-87 327.0 229 69.4
Os07g0260300 Oryza sativa ssp. japonica HOM05D007108 ORTHO05D009128 1.5e-87 326.6 191 77.5
Hma1.2p1_0107F.1_g051540 Hydrangea macrophylla HOM05D007108 ORTHO05D009128 2.0e-87 326.2 218 72.0
PSO782G4411 Papaver somniferum HOM05D007108 ORTHO05D009128 5.7e-87 324.7 221 72.4
Lsat_1_v5_gn_9_77661 Lactuca sativa HOM05D007108 ORTHO05D009128 3.7e-86 322.0 200 75.5
COL.COLO4_06005 Corchorus olitorius HOM05D007108 ORTHO05D009128 3.1e-85 318.9 228 69.3
Cpa.g.sc49.50 Carica papaya HOM05D007108 ORTHO05D009128 2.6e-84 315.8 189 78.3
arahy.Tifrunner.gnm1.ann1.3M80B2 Arachis hypogaea HOM05D007108 ORTHO05D009128 6.5e-83 311.2 181 80.7
C05p20230 Brassica napus HOM05D007108 ORTHO05D009128 7.2e-82 307.8 215 69.8
ATR1136G010 Amborella trichopoda HOM05D007108 ORTHO05D009128 9.4e-82 307.4 181 78.5
SEGI_12340 Sequoiadendron giganteum HOM05D007108 ORTHO05D009128 1.2e-81 307.0 199 70.4
FAN20G1168 Fragaria x ananassa HOM05D007108 ORTHO05D009128 2.1e-81 306.2 164 84.8
Nitab4.5_0000299g0220 Nicotiana tabacum HOM05D007108 ORTHO05D009128 2.1e-81 306.2 225 67.1
EL10Ac1g01484 Beta vulgaris HOM05D007108 ORTHO05D009128 4.7e-81 305.1 214 70.1
CDE08G0865 Ceratophyllum demersum HOM05D007108 ORTHO05D009128 7.9e-81 304.3 224 66.5
arahy.Tifrunner.gnm1.ann1.QUZ9E8 Arachis hypogaea HOM05D007108 ORTHO05D009128 9.7e-79 297.4 209 70.3
SEGI_05187 Sequoiadendron giganteum HOM05D007108 ORTHO05D009128 2.2e-78 296.2 185 72.4
SGA_v2.0_scaffold24G10368 Striga asiatica HOM05D007108 ORTHO05D009128 3.1e-77 292.4 186 75.8
Dinv41114 Davidia involucrata HOM05D007108 ORTHO05D009128 7.0e-77 291.2 208 71.2
CiPaw.16G016700 Carya illinoinensis HOM05D007108 ORTHO05D009128 1.5e-76 290.0 200 70.0
AUR62026764 Chenopodium quinoa HOM05D007108 ORTHO05D009128 5.0e-75 285.0 222 66.2
Pp3c20_22500 Physcomitrium patens HOM05D007108 ORTHO05D009128 1.1e-74 283.9 191 66.5
CBR_g41654 Chara braunii HOM05D007108 ORTHO05D009128 5.5e-74 281.6 212 63.2
Actinidia01141 Actinidia chinensis HOM05D007108 ORTHO05D009128 1.2e-73 280.4 194 70.1
Psat5g082320 Pisum sativum HOM05D007108 ORTHO05D009128 1.2e-73 280.4 202 70.8
AagrBONN_evm.TU.Sc2ySwM_117.292 Anthoceros agrestis HOM05D007108 ORTHO05D009128 1.4e-72 276.9 195 65.1
Pp3c23_490 Physcomitrium patens HOM05D007108 ORTHO05D009128 9.7e-71 270.8 174 67.2
AUR62013508 Chenopodium quinoa HOM05D007108 ORTHO05D009128 1.5e-66 256.9 218 62.8
unitig_26.g9907 Utricularia gibba HOM05D007108 ORTHO05D009128 4.0e-64 248.8 195 62.6
Sabra02G0055700 Salix brachista HOM05D007108 ORTHO05D009128 2.0e-63 246.5 185 64.3
SMO228G0194 Selaginella moellendorffii HOM05D007108 ORTHO05D009128 1.8e-61 240.0 147 74.1
MELO3C024103.2 Cucumis melo HOM05D007108 ORTHO05D009128 4.1e-61 238.8 163 72.4
SMO347G0599 Selaginella moellendorffii HOM05D007108 ORTHO05D009128 4.0e-56 222.2 172 59.9
FAN24G1879 Fragaria x ananassa HOM05D007108 ORTHO05D009128 4.4e-55 218.8 191 59.2
FAN15G3050 Fragaria x ananassa HOM05D007108 ORTHO05D009128 5.7e-55 218.4 191 58.6
Cre17.g715500 Chlamydomonas reinhardtii HOM05D007108 ORTHO05D009128 9.1e-53 211.1 214 49.5
Nitab4.5_0000427g0030 Nicotiana tabacum HOM05D007108 ORTHO05D009128 2.3e-51 206.5 137 72.3
PSO384G3614 Papaver somniferum HOM05D007108 ORTHO05D009128 5.2e-48 195.3 224 50.0
Lj7A366T74 Lonicera japonica HOM05D007108 ORTHO05D009128 1.0e-43 181.0 200 52.0
Zm00001eb097150 Zea mays HOM05D007108 ORTHO05D009128 1.1e-42 177.6 150 58.7
HanXRQChr03g0063741 Helianthus annuus HOM05D007108 ORTHO05D009128 6.8e-40 168.3 103 74.8
SMO228G0031 Selaginella moellendorffii HOM05D007108 ORTHO05D009128 1.2e-39 167.5 149 50.3
SEGI_19863 Sequoiadendron giganteum HOM05D007108 ORTHO05D009128 9.8e-39 164.5 105 74.3
Psat2g167120 Pisum sativum HOM05D007108 ORTHO05D003402 5.6e-26 122.1 71 80.3
Psat7g065200 Pisum sativum HOM05D007108 ORTHO05D009128 2.3e-24 116.7 70 75.7
Ca_16660_v3 Cicer arietinum L. HOM05D006773 ORTHO05D008775 9.9e-23 111.3 212 37.7
Dinv25820 Davidia involucrata HOM05D007108 ORTHO05D009128 3.0e-11 73.2 48 70.8


User provided reference genes

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