Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_010250 Daucus carota HOM05D007225 ORTHO05D009062 1.1e-131 473.4 255 100.0
Dinv24394 Davidia involucrata HOM05D007225 ORTHO05D009062 7.0e-62 241.5 255 50.6
Ciclev10002244m.g Citrus clementina HOM05D007225 ORTHO05D009062 7.3e-59 231.5 256 50.0
Hma1.2p1_0539F.1_g174530 Hydrangea macrophylla HOM05D007225 ORTHO05D009062 7.5e-56 221.5 257 47.9
CSS0045766 Camellia sinensis var. sinensis HOM05D007225 ORTHO05D009062 1.7e-55 220.3 255 47.1
vmacro12787 Vaccinium macrocarpon HOM05D007225 ORTHO05D009062 2.9e-55 219.5 259 45.9
CiPaw.04G081200 Carya illinoinensis HOM05D007225 ORTHO05D009062 3.7e-55 219.2 255 47.8
Atru.chr4.938 Acer truncatum HOM05D007225 ORTHO05D009062 1.3e-52 210.7 257 46.3
Eucgr.I00189 Eucalyptus grandis HOM05D007225 ORTHO05D009062 1.4e-49 200.7 250 45.2
Potri.005G064800 Populus trichocarpa HOM05D007225 ORTHO05D009062 4.0e-49 199.1 253 43.9
Potri.005G064951 Populus trichocarpa HOM05D007225 ORTHO05D009062 4.0e-49 199.1 253 43.9
Prupe.4G273000 Prunus persica HOM05D007225 ORTHO05D009062 2.6e-48 196.4 254 44.9
Cpa.g.sc42.174 Carica papaya HOM05D007225 ORTHO05D009062 4.4e-48 195.7 254 40.9
Sabra05G0053800 Salix brachista HOM05D007225 ORTHO05D009062 9.9e-48 194.5 253 44.3
TAR625G0602 Trochodendron aralioides HOM05D007225 ORTHO05D009062 1.7e-47 193.7 259 42.5
QL10p043051 Quercus lobata HOM05D007225 ORTHO05D009062 2.2e-47 193.4 299 40.8
FAN12G1161 Fragaria x ananassa HOM05D007225 ORTHO05D009062 4.9e-47 192.2 246 43.1
FAN07G2982 Fragaria x ananassa HOM05D007225 ORTHO05D009062 6.4e-47 191.8 246 42.3
FvH4_4g13030 Fragaria vesca HOM05D007225 ORTHO05D009062 1.9e-46 190.3 246 42.7
Thecc.01G134800 Theobroma cacao HOM05D007225 ORTHO05D009062 1.9e-46 190.3 255 42.0
MD17G1201700 Malus domestica HOM05D007225 ORTHO05D009062 7.1e-46 188.3 247 43.3
Psat7g045080 Pisum sativum HOM05D007225 ORTHO05D009062 1.6e-45 187.2 252 41.7
Lj4g0008022 Lotus japonicus HOM05D007225 ORTHO05D009062 2.7e-45 186.4 250 42.4
RcHm_v2.0_Chr4g0412751 Rosa chinensis HOM05D007225 ORTHO05D009062 2.7e-45 186.4 246 42.7
Sopen01g048040 Solanum pennellii HOM05D007225 ORTHO05D009062 3.5e-45 186.0 257 40.1
TAR381G0670 Trochodendron aralioides HOM05D007225 ORTHO05D009062 3.5e-45 186.0 254 40.6
Solyc01g105570.4 Solanum lycopersicum HOM05D007225 ORTHO05D009062 4.6e-45 185.7 257 39.7
Cc07_g18810 Coffea canephora HOM05D007225 ORTHO05D009062 6.0e-45 185.3 255 43.1
COL.COLO4_35773 Corchorus olitorius HOM05D007225 ORTHO05D009062 7.8e-45 184.9 255 40.8
Gohir.D10G108600 Gossypium hirsutum HOM05D007225 ORTHO05D009062 7.8e-45 184.9 255 40.8
Gorai.011G119000 Gossypium raimondii HOM05D007225 ORTHO05D009062 1.0e-44 184.5 255 40.8
PGR119G1418 Punica granatum HOM05D007225 ORTHO05D009062 1.0e-44 184.5 255 42.0
PGSC0003DMG400012541 Solanum tuberosum HOM05D007225 ORTHO05D009062 1.0e-44 184.5 258 40.3
TPR.G37342 Trifolium pratense HOM05D007225 ORTHO05D009062 2.3e-44 183.3 252 40.9
Ca_17629_v3 Cicer arietinum L. HOM05D007225 ORTHO05D009062 1.1e-43 181.0 252 40.5
Nitab4.5_0000386g0080 Nicotiana tabacum HOM05D007225 ORTHO05D009062 1.5e-43 180.6 257 42.8
Migut.H00686 Erythranthe guttata HOM05D007225 ORTHO05D009062 3.3e-43 179.5 254 43.3
Lalb_Chr13g0296631 Lupinus albus HOM05D007225 ORTHO05D009062 2.1e-42 176.8 251 40.2
CANSAT01G2273 Cannabis sativa HOM05D007225 ORTHO05D009062 2.8e-42 176.4 260 41.9
CsaV3_2G019450 Cucumis sativus L. HOM05D007225 ORTHO05D009062 6.2e-42 175.3 252 40.5
Oeu058297.1 Olea europaea HOM05D007225 ORTHO05D009062 8.1e-42 174.9 253 39.5
ECA233G3017 Erigeron canadensis HOM05D007225 ORTHO05D000131 1.1e-41 174.5 234 43.2
ClCG02G000390 Citrullus lanatus HOM05D007225 ORTHO05D009062 1.4e-41 174.1 266 39.8
Lsat_1_v5_gn_5_68521 Lactuca sativa HOM05D007225 ORTHO05D009062 2.4e-41 173.3 241 42.3
Rhsim10G0132500 Rhododendron simsii HOM05D007225 ORTHO05D009062 3.1e-41 172.9 373 33.5
Sed0013127 Sechium edule HOM05D007225 ORTHO05D009062 4.0e-41 172.6 251 40.2
MBI06_g27455_MAGBIO Magnolia biondii HOM05D007225 ORTHO05D009062 7.6e-40 168.3 255 38.0
Hund04436 Selenicereus undatus HOM05D007225 ORTHO05D009062 7.6e-40 168.3 255 39.2
Sc07g0001760 Simmondsia chinensis HOM05D007225 ORTHO05D009062 7.6e-40 168.3 250 39.6
MSTRG.23466 Avicennia marina HOM05D007225 ORTHO05D009062 2.4e-38 163.3 253 41.9
Duzib187G1928 Durio zibethinus HOM05D007225 ORTHO05D009062 3.2e-38 162.9 255 38.0
PSO528G0250 Papaver somniferum HOM05D007225 ORTHO05D009062 1.6e-37 160.6 270 37.0
Glyma.05G192800 Glycine max HOM05D007225 ORTHO05D009062 2.7e-37 159.8 252 36.9
GSVIVG01022343001 Vitis vinifera HOM05D007225 ORTHO05D009062 3.5e-37 159.5 155 51.6
Manes.12G157300 Manihot esculenta HOM05D007225 ORTHO05D009062 4.6e-37 159.1 184 44.6
Phvul.002G273400 Phaseolus vulgaris HOM05D007225 ORTHO05D009062 7.8e-37 158.3 253 38.7
DCAR_014328 Daucus carota HOM05D007225 ORTHO05D009062 2.3e-36 156.8 239 39.3
AUR62017902 Chenopodium quinoa HOM05D007225 ORTHO05D009062 3.9e-36 156.0 267 37.8
AUR62043562 Chenopodium quinoa HOM05D007225 ORTHO05D009062 3.9e-36 156.0 267 37.8
AUR62003589 Chenopodium quinoa HOM05D007225 ORTHO05D009062 8.7e-36 154.8 267 37.8
PSO170G5625 Papaver somniferum HOM05D007225 ORTHO05D009062 1.9e-35 153.7 270 36.7
Nn5g28498 Nelumbo nucifera HOM05D007225 ORTHO05D009062 4.3e-35 152.5 172 44.8
Medtr8g093850 Medicago truncatula HOM05D007225 ORTHO05D009062 2.1e-34 150.2 171 46.2
Gohir.A10G156900 Gossypium hirsutum HOM05D007225 ORTHO05D009062 3.6e-34 149.4 171 45.0
Peaxi162Scf00172g00611 Petunia axillaris HOM05D007225 ORTHO05D009062 4.8e-34 149.1 155 47.7
Thhalv10004850m.g Eutrema salsugineum HOM05D007225 ORTHO05D009062 8.1e-34 148.3 246 37.4
Sp2g27080 Schrenkiella parvula HOM05D007225 ORTHO05D009062 8.1e-34 148.3 255 39.6
AL8G41270 Arabidopsis lyrata HOM05D007225 ORTHO05D009062 1.4e-33 147.5 246 37.8
EL10Ac1g01390 Beta vulgaris HOM05D007225 ORTHO05D009062 1.8e-33 147.1 306 33.3
A06p30630 Brassica napus HOM05D007225 ORTHO05D009062 5.3e-33 145.6 252 37.3
AT5G64010 Arabidopsis thaliana HOM05D007225 ORTHO05D009062 9.0e-33 144.8 256 37.9
HanXRQChr12g0380581 Helianthus annuus HOM05D007225 ORTHO05D009062 2.0e-32 143.7 188 44.7
BraA06t26013Z Brassica rapa HOM05D007225 ORTHO05D009062 2.6e-32 143.3 252 36.9
Aqoxy5G02304 Aquilegia oxysepala HOM05D007225 ORTHO05D009062 3.4e-32 142.9 267 35.6
Carub.0008s2479 Capsella rubella HOM05D007225 ORTHO05D009062 7.6e-32 141.7 248 37.5
HPP92_025180 Vanilla planifolia HOM05D007225 ORTHO05D009062 2.2e-31 140.2 268 35.1
CARHR277930 Cardamine hirsuta HOM05D007225 ORTHO05D002208 2.9e-31 139.8 258 37.6
BcaC01g02654 Brassica carinata HOM05D007225 ORTHO05D009062 6.4e-31 138.7 251 35.1
C03p62330 Brassica napus HOM05D007225 ORTHO05D009062 6.4e-31 138.7 251 35.1
BolC3t18495H Brassica oleracea HOM05D007225 ORTHO05D009062 6.4e-31 138.7 251 35.1
VMungo0251G1761 Vigna mungo HOM05D007225 ORTHO05D009062 2.4e-30 136.7 181 42.0
ATR0709G077 Amborella trichopoda HOM05D007225 ORTHO05D009062 9.3e-30 134.8 183 43.2
unitig_699.g19729 Utricularia gibba HOM05D007225 ORTHO05D009062 1.2e-29 134.4 254 34.3
Aqoxy6G00280 Aquilegia oxysepala HOM05D007225 ORTHO05D009062 6.0e-29 132.1 174 40.8
THA.LOC104818429 Tarenaya hassleriana HOM05D007225 ORTHO05D009062 2.5e-27 126.7 247 35.2
Aa31LG1G17910 Aethionema arabicum HOM05D007225 ORTHO05D009062 4.8e-26 122.5 267 34.5
Os04g0693250 Oryza sativa ssp. japonica HOM05D007225 ORTHO05D009062 1.4e-25 120.9 236 33.5
Haze_25275 Corylus avellana HOM05D007225 ORTHO05D009062 1.8e-25 120.6 103 58.3
AagrBONN_evm.TU.Sc2ySwM_368.986 Anthoceros agrestis HOM05D007225 ORTHO05D009062 2.4e-25 120.2 185 35.7
Ah.02g121670 Amaranthus hybridus HOM05D007225 ORTHO05D009062 6.9e-25 118.6 187 38.0
Nn1g06303 Nelumbo nucifera HOM05D007225 ORTHO05D009062 2.6e-24 116.7 262 31.3
Mapoly0095s0053 Marchantia polymorpha HOM05D007225 ORTHO05D009062 2.4e-22 110.2 180 35.6
Pp3c8_18500 Physcomitrium patens HOM05D007225 ORTHO05D009062 2.7e-21 106.7 180 32.8
arahy.Tifrunner.gnm1.ann1.ST1FFJ Arachis hypogaea HOM05D007225 ORTHO05D009062 1.1e-19 101.3 101 47.5
MELO3C023228.2 Cucumis melo HOM05D007225 ORTHO05D009062 1.1e-19 101.3 163 39.3
Glyma.08G000900 Glycine max HOM05D007225 ORTHO05D009062 7.4e-19 98.6 254 31.5
AagrBONN_evm.TU.Sc2ySwM_117.1984 Anthoceros agrestis HOM05D007225 ORTHO05D009062 1.3e-18 97.8 185 34.6
SGA_v2.0_scaffold20G09018 Striga asiatica HOM05D007225 ORTHO05D009062 1.6e-18 97.4 169 34.9
RcHm_v2.0_Chr4g0412711 Rosa chinensis HOM05D007225 ORTHO05D009062 2.1e-18 97.1 114 43.0
SMO146G0397 Selaginella moellendorffii HOM05D007225 ORTHO05D009062 5.3e-17 92.4 264 25.0
SHI11479 Sapria himalayana HOM05D000043 ORTHO05D002577 2.6e-16 90.1 105 41.9
Nitab4.5_0010123g0010 Nicotiana tabacum HOM05D007225 ORTHO05D009062 1.3e-15 87.8 162 37.0
Nitab4.5_0008206g0020 Nicotiana tabacum HOM05D007225 ORTHO05D009062 2.9e-15 86.7 162 38.9
Carub.0003s2889 Capsella rubella HOM05D007225 ORTHO05D009062 1.1e-14 84.7 89 48.3
CBR_g23098 Chara braunii HOM05D007225 ORTHO05D009062 4.2e-06 56.2 207 23.7
Os04g0693200 Oryza sativa ssp. japonica HOM05D007225 ORTHO05D009062 4.2e-06 56.2 59 44.1
Zm00001eb434540 Zea mays HOM05D007225 ORTHO05D009062 5.5e-06 55.8 80 37.5


User provided reference genes

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