Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_010078 Daucus carota HOM05D006985 ORTHO05D008749 1.1e-102 376.7 195 100.0
CSS0005033 Camellia sinensis var. sinensis HOM05D006985 ORTHO05D008749 4.4e-56 221.9 194 63.9
Lj2A564T40 Lonicera japonica HOM05D006985 ORTHO05D008749 4.4e-56 221.9 204 62.3
Actinidia28892 Actinidia chinensis HOM05D006985 ORTHO05D008749 5.8e-56 221.5 199 61.3
Rhsim10G0013600 Rhododendron simsii HOM05D006985 ORTHO05D008749 7.5e-56 221.1 187 62.6
Dinv42695 Davidia involucrata HOM05D006985 ORTHO05D008749 9.8e-56 220.7 186 65.1
ECA238G4202 Erigeron canadensis HOM05D006985 ORTHO05D008749 9.8e-56 220.7 204 59.3
Peaxi162Scf00323g00052 Petunia axillaris HOM05D006985 ORTHO05D008749 2.2e-55 219.5 201 60.7
Rhsim08G0007300 Rhododendron simsii HOM05D006985 ORTHO05D008749 2.2e-55 219.5 187 62.0
CSS0027796 Camellia sinensis var. sinensis HOM05D006985 ORTHO05D008749 6.4e-55 218.0 193 63.7
Rhsim08G0006600 Rhododendron simsii HOM05D006985 ORTHO05D008749 6.4e-55 218.0 186 62.4
CAN.G276.1 Capsicum annuum HOM05D006985 ORTHO05D008749 8.3e-55 217.6 202 60.9
Nitab4.5_0000471g0030 Nicotiana tabacum HOM05D006985 ORTHO05D008749 1.9e-54 216.5 197 60.9
Sabra05G0069300 Salix brachista HOM05D006985 ORTHO05D008749 3.2e-54 215.7 194 59.8
Sopen04g023520 Solanum pennellii HOM05D006985 ORTHO05D008749 4.1e-54 215.3 202 60.4
Solyc04g053130.4 Solanum lycopersicum HOM05D006985 ORTHO05D008749 5.4e-54 214.9 202 60.4
Duzib147G0418 Durio zibethinus HOM05D006985 ORTHO05D008749 7.0e-54 214.5 199 58.8
TWI53G2009 Tripterygium wilfordii HOM05D006985 ORTHO05D008749 1.2e-53 213.8 190 64.2
GSVIVG01022222001 Vitis vinifera HOM05D006985 ORTHO05D008749 1.2e-53 213.8 200 63.0
Oeu028373.1 Olea europaea HOM05D006985 ORTHO05D008749 1.6e-53 213.4 195 61.5
Eucgr.I00326 Eucalyptus grandis HOM05D006985 ORTHO05D008749 2.0e-53 213.0 206 58.3
Potri.005G084200 Populus trichocarpa HOM05D006985 ORTHO05D008749 2.0e-53 213.0 181 61.9
QL06p032211 Quercus lobata HOM05D006985 ORTHO05D008749 2.0e-53 213.0 207 60.9
Thecc.01G112400 Theobroma cacao HOM05D006985 ORTHO05D008749 2.0e-53 213.0 202 58.9
Lsat_1_v5_gn_2_67381 Lactuca sativa HOM05D006985 ORTHO05D008749 2.7e-53 212.6 206 57.3
PGSC0003DMG400016590 Solanum tuberosum HOM05D006985 ORTHO05D008749 1.7e-52 209.9 201 59.7
Nn5g28916 Nelumbo nucifera HOM05D006985 ORTHO05D008749 3.0e-52 209.1 198 56.6
Lalb_Chr13g0296201 Lupinus albus HOM05D006985 ORTHO05D008749 5.0e-52 208.4 198 56.6
PGR004G1495 Punica granatum HOM05D006985 ORTHO05D008749 1.1e-51 207.2 208 57.7
TAR625G1052 Trochodendron aralioides HOM05D006985 ORTHO05D008749 1.5e-51 206.8 195 58.5
CiPaw.04G092100 Carya illinoinensis HOM05D006985 ORTHO05D008749 1.9e-51 206.5 159 67.9
COL.COLO4_11016 Corchorus olitorius HOM05D006985 ORTHO05D008749 3.3e-51 205.7 192 58.9
arahy.Tifrunner.gnm1.ann1.7DG6XK Arachis hypogaea HOM05D006985 ORTHO05D008749 4.3e-51 205.3 199 55.8
arahy.Tifrunner.gnm1.ann1.MHK3H7 Arachis hypogaea HOM05D006985 ORTHO05D008749 4.3e-51 205.3 199 55.8
Glyma.08G141300 Glycine max HOM05D006985 ORTHO05D008749 4.3e-51 205.3 200 56.0
Manes.12G142400 Manihot esculenta HOM05D006985 ORTHO05D008749 5.6e-51 204.9 200 57.0
Oeu030683.1 Olea europaea HOM05D006985 ORTHO05D008749 1.2e-50 203.8 198 57.6
Cc07_g16120 Coffea canephora HOM05D006985 ORTHO05D008749 1.6e-50 203.4 207 54.6
Gohir.D03G045800 Gossypium hirsutum HOM05D006985 ORTHO05D008749 1.6e-50 203.4 199 57.8
Gorai.003G047000 Gossypium raimondii HOM05D006985 ORTHO05D008749 1.6e-50 203.4 199 57.8
SGA_v2.0_scaffold51G18747 Striga asiatica HOM05D006985 ORTHO05D008749 1.6e-50 203.4 196 57.1
Glyma.05G183500 Glycine max HOM05D006985 ORTHO05D008749 2.1e-50 203.0 199 56.3
Gohir.A02G134801 Gossypium hirsutum HOM05D006985 ORTHO05D008749 2.8e-50 202.6 199 57.3
MELO3C007486.2 Cucumis melo HOM05D006985 ORTHO05D008749 6.2e-50 201.4 180 58.9
Cfa002750 Carpinus fangiana HOM05D006985 ORTHO05D008749 8.1e-50 201.1 202 54.5
MBI02_g45734_MAGBIO Magnolia biondii HOM05D006985 ORTHO05D008749 1.1e-49 200.7 186 59.1
Duzib187G0142 Durio zibethinus HOM05D006985 ORTHO05D008749 1.4e-49 200.3 201 57.7
Phvul.002G264600 Phaseolus vulgaris HOM05D006985 ORTHO05D008749 1.4e-49 200.3 193 57.0
MSTRG.23313 Avicennia marina HOM05D006985 ORTHO05D008749 2.3e-49 199.5 187 58.3
Hma1.2p1_0375F.1_g138690 Hydrangea macrophylla HOM05D006985 ORTHO05D008749 3.1e-49 199.1 168 64.3
Lj4g0016816 Lotus japonicus HOM05D006985 ORTHO05D008749 4.0e-49 198.7 194 59.3
Ciclev10026526m.g Citrus clementina HOM05D006985 ORTHO05D008749 8.9e-49 197.6 206 57.3
CANSAT01G0007 Cannabis sativa HOM05D006985 ORTHO05D008749 1.5e-48 196.8 206 54.4
Haze_25036 Corylus avellana HOM05D006985 ORTHO05D008749 1.5e-48 196.8 206 53.4
FAN23G1894 Fragaria x ananassa HOM05D006985 ORTHO05D008749 1.5e-48 196.8 174 59.2
HanXRQChr14g0446291 Helianthus annuus HOM05D006985 ORTHO05D008749 1.5e-48 196.8 205 53.7
FvH4_1g22220 Fragaria vesca HOM05D006985 ORTHO05D008749 2.0e-48 196.4 199 53.8
MBI02_g20708_MAGBIO Magnolia biondii HOM05D006985 ORTHO05D008749 2.0e-48 196.4 186 58.6
Sed0020932 Sechium edule HOM05D006985 ORTHO05D008749 2.0e-48 196.4 173 59.5
THA.LOC104804144 Tarenaya hassleriana HOM05D006985 ORTHO05D008749 2.0e-48 196.4 202 54.0
VMungo0251G1437 Vigna mungo HOM05D006985 ORTHO05D008749 2.0e-48 196.4 193 56.0
ClCG01G016160 Citrullus lanatus HOM05D006985 ORTHO05D008749 2.6e-48 196.1 197 55.8
RcHm_v2.0_Chr2g0116361 Rosa chinensis HOM05D006985 ORTHO05D008749 3.4e-48 195.7 175 61.1
SalBow6G7167 Salvia bowleyana HOM05D006985 ORTHO05D008749 4.4e-48 195.3 188 59.0
Atru.chr4.358 Acer truncatum HOM05D006985 ORTHO05D008749 7.5e-48 194.5 159 62.9
CsaV3_6G042430 Cucumis sativus L. HOM05D006985 ORTHO05D008749 9.9e-48 194.1 163 58.9
Migut.H02428 Erythranthe guttata HOM05D006985 ORTHO05D008749 1.3e-47 193.7 195 54.4
vmacro18630 Vaccinium macrocarpon HOM05D006985 ORTHO05D008749 2.9e-47 192.6 207 52.7
Ca_17697_v3 Cicer arietinum L. HOM05D006985 ORTHO05D008749 1.9e-46 189.9 197 55.3
AL4G11290 Arabidopsis lyrata HOM05D006985 ORTHO05D008749 5.4e-46 188.3 201 49.3
Hund03540 Selenicereus undatus HOM05D006985 ORTHO05D008749 5.4e-46 188.3 196 54.1
Aqoxy7G01607 Aquilegia oxysepala HOM05D006985 ORTHO05D008749 3.5e-45 185.7 158 60.8
Sc16g0004160 Simmondsia chinensis HOM05D006985 ORTHO05D008749 3.5e-45 185.7 186 55.9
Aqoxy5G01954 Aquilegia oxysepala HOM05D006985 ORTHO05D008749 4.6e-45 185.3 158 60.8
Dinv19490 Davidia involucrata HOM05D006985 ORTHO05D008749 4.6e-45 185.3 172 59.9
Zm00001eb431840 Zea mays HOM05D006985 ORTHO05D008749 6.0e-45 184.9 199 51.8
Sp4g01050 Schrenkiella parvula HOM05D006985 ORTHO05D008749 7.8e-45 184.5 157 59.2
BcaB08g35014 Brassica carinata HOM05D006985 ORTHO05D008749 1.3e-44 183.7 159 59.1
C08p41110 Brassica napus HOM05D006985 ORTHO05D008749 1.7e-44 183.3 200 49.5
BolC8t51677H Brassica oleracea HOM05D006985 ORTHO05D008749 1.7e-44 183.3 200 49.5
BraA09t41180Z Brassica rapa HOM05D006985 ORTHO05D008749 1.7e-44 183.3 200 49.5
AT2G21970 Arabidopsis thaliana HOM05D006985 ORTHO05D008749 2.3e-44 183.0 160 58.8
A09p57880 Brassica napus HOM05D006985 ORTHO05D008749 2.3e-44 183.0 200 49.5
BcaC07g41109 Brassica carinata HOM05D006985 ORTHO05D008749 3.0e-44 182.6 200 49.0
Aa31LG7G14690 Aethionema arabicum HOM05D006985 ORTHO05D008749 5.1e-44 181.8 197 50.3
Cpa.g.sc196.10 Carica papaya HOM05D006985 ORTHO05D008749 8.6e-44 181.0 156 64.7
Prupe.6G173300 Prunus persica HOM05D006985 ORTHO05D008749 1.1e-43 180.6 202 52.0
Thhalv10000325m.g Eutrema salsugineum HOM05D006985 ORTHO05D008749 2.5e-43 179.5 162 56.8
Ah.03g141710 Amaranthus hybridus HOM05D006985 ORTHO05D008749 3.3e-43 179.1 188 54.3
Psat7g051440 Pisum sativum HOM05D006985 ORTHO05D008749 5.6e-43 178.3 178 55.6
Carub.0004s0111 Capsella rubella HOM05D006985 ORTHO05D008749 7.3e-43 177.9 158 58.2
EL10Ac6g14751 Beta vulgaris HOM05D006985 ORTHO05D008749 1.6e-42 176.8 196 52.0
AUR62016276 Chenopodium quinoa HOM05D006985 ORTHO05D008749 1.6e-42 176.8 198 50.5
MD15G1333400 Malus domestica HOM05D006985 ORTHO05D008749 2.1e-42 176.4 149 61.7
MSTRG.3810 Avicennia marina HOM05D006985 ORTHO05D008749 8.1e-42 174.5 153 62.1
AUR62003309 Chenopodium quinoa HOM05D006985 ORTHO05D008749 8.1e-42 174.5 191 50.3
Os04g0639200 Oryza sativa ssp. japonica HOM05D006985 ORTHO05D008749 1.4e-41 173.7 196 47.4
CDE02G4368 Ceratophyllum demersum HOM05D006985 ORTHO05D008749 3.1e-41 172.6 184 51.6
PSO210G1005 Papaver somniferum HOM05D006985 ORTHO05D008749 1.2e-40 170.6 195 48.7
HPP92_013077 Vanilla planifolia HOM05D006985 ORTHO05D008749 1.1e-38 164.1 159 52.2
ATR0564G194 Amborella trichopoda HOM05D006985 ORTHO05D008749 1.2e-32 144.1 188 43.1
SEGI_00004 Sequoiadendron giganteum HOM05D006985 ORTHO05D008749 1.2e-29 134.0 148 46.6
CARHR113060 Cardamine hirsuta HOM05D006985 ORTHO05D008749 9.0e-25 117.9 92 58.7
Hund19658 Selenicereus undatus HOM05D006985 ORTHO05D008749 3.8e-23 112.5 126 50.0
PSO170G0586 Papaver somniferum HOM05D006985 ORTHO05D008749 1.9e-22 110.2 151 45.7
AagrBONN_evm.TU.Sc2ySwM_362.2621 Anthoceros agrestis HOM05D006985 ORTHO05D008749 1.7e-15 87.0 153 30.7
SMO174G0105 Selaginella moellendorffii HOM05D006985 ORTHO05D008749 1.1e-14 84.3 189 28.6
SMO356G0636 Selaginella moellendorffii HOM05D006985 ORTHO05D008749 1.2e-13 80.9 144 29.2
CARHR113050 Cardamine hirsuta HOM05D006985 ORTHO05D008749 1.0e-12 77.8 116 44.0
Mapoly0007s0046 Marchantia polymorpha HOM05D006985 ORTHO05D008749 1.8e-12 77.0 149 33.6
FAN26G1540 Fragaria x ananassa HOM05D000436 ORTHO05D000678 2.5e-11 73.2 84 50.0
Pp3c16_13700 Physcomitrium patens HOM05D006985 ORTHO05D008749 1.3e-10 70.9 177 27.7
CBR_g770 Chara braunii HOM05D006985 ORTHO05D008749 2.1e-10 70.1 149 32.2
unitig_88.g27736 Utricularia gibba HOM05D006985 ORTHO05D008749 4.8e-10 68.9 93 45.2
Pp3c27_3810 Physcomitrium patens HOM05D006985 ORTHO05D008749 8.2e-10 68.2 143 31.5
CDE08G1171 Ceratophyllum demersum HOM05D000290 ORTHO05D009072 1.4e-09 67.4 73 50.7


User provided reference genes

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