Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_010068 Daucus carota HOM05D004272 ORTHO05D005020 7.4e-189 663.7 327 100.0
GSVIVG01034890001 Vitis vinifera HOM05D004272 ORTHO05D005020 8.3e-124 447.6 316 70.6
Ciclev10001727m.g Citrus clementina HOM05D004272 ORTHO05D005020 1.2e-122 443.7 309 68.6
Dinv12903 Davidia involucrata HOM05D004272 ORTHO05D005020 7.8e-122 441.0 314 70.4
Hma1.2p1_0510F.1_g168790 Hydrangea macrophylla HOM05D004272 ORTHO05D005020 1.0e-121 440.7 320 69.1
Manes.18G099100 Manihot esculenta HOM05D004272 ORTHO05D005020 4.3e-120 435.3 326 67.5
Prupe.8G052200 Prunus persica HOM05D004272 ORTHO05D005020 9.5e-120 434.1 316 68.0
Carub.0002s1862 Capsella rubella HOM05D004272 ORTHO05D005020 2.1e-119 433.0 307 69.4
Cc00_g04120 Coffea canephora HOM05D004272 ORTHO05D005020 4.7e-119 431.8 325 67.4
THA.LOC104800104 Tarenaya hassleriana HOM05D004272 ORTHO05D005020 4.7e-119 431.8 293 70.3
QL02p034274 Quercus lobata HOM05D004272 ORTHO05D005020 1.0e-118 430.6 317 68.1
CSS0015299 Camellia sinensis var. sinensis HOM05D004272 ORTHO05D005020 4.0e-118 428.7 317 65.9
Gohir.A09G116800 Gossypium hirsutum HOM05D004272 ORTHO05D005020 4.0e-118 428.7 326 64.7
Oeu030010.1 Olea europaea HOM05D004272 ORTHO05D005020 5.2e-118 428.3 315 68.3
Sabra13G0097600 Salix brachista HOM05D004272 ORTHO05D005020 6.8e-118 427.9 320 64.1
Potri.013G115400 Populus trichocarpa HOM05D004272 ORTHO05D005020 8.9e-118 427.6 323 64.4
CANSAT25G2208 Cannabis sativa HOM05D004272 ORTHO05D005020 2.6e-117 426.0 309 66.7
Gohir.D09G113700 Gossypium hirsutum HOM05D004272 ORTHO05D005020 3.4e-117 425.6 326 64.7
Lj7C302G8 Lonicera japonica HOM05D004272 ORTHO05D005020 7.5e-117 424.5 381 59.3
MD05G1039700 Malus domestica HOM05D004272 ORTHO05D005020 7.5e-117 424.5 306 69.3
TAR381G1009 Trochodendron aralioides HOM05D004272 ORTHO05D005020 9.8e-117 424.1 294 69.7
Thhalv10018624m.g Eutrema salsugineum HOM05D004272 ORTHO05D005020 1.3e-116 423.7 305 68.9
Gorai.006G131400 Gossypium raimondii HOM05D004272 ORTHO05D005020 1.3e-116 423.7 326 64.4
Peaxi162Scf00268g01426 Petunia axillaris HOM05D004272 ORTHO05D005020 2.9e-116 422.5 319 66.5
Sp5g26920 Schrenkiella parvula HOM05D004272 ORTHO05D005020 4.9e-116 421.8 305 68.2
SpUn0020_0060 Schrenkiella parvula HOM05D004272 ORTHO05D005020 4.9e-116 421.8 305 68.2
Thecc.08G200200 Theobroma cacao HOM05D004272 ORTHO05D005020 4.9e-116 421.8 324 63.9
arahy.Tifrunner.gnm1.ann1.6Q1IL7 Arachis hypogaea HOM05D004272 ORTHO05D005020 6.4e-116 421.4 316 65.8
Eucgr.F04145 Eucalyptus grandis HOM05D004272 ORTHO05D005020 6.4e-116 421.4 324 65.1
Oeu004773.1 Olea europaea HOM05D004272 ORTHO05D005020 1.1e-115 420.6 327 65.7
arahy.Tifrunner.gnm1.ann1.CBRY2G Arachis hypogaea HOM05D004272 ORTHO05D005020 1.4e-115 420.2 316 65.5
CiPaw.15G083400 Carya illinoinensis HOM05D004272 ORTHO05D005020 1.4e-115 420.2 319 65.5
CiPaw.16G063800 Carya illinoinensis HOM05D004272 ORTHO05D005020 4.1e-115 418.7 316 64.9
MD10G1045300 Malus domestica HOM05D004272 ORTHO05D005020 4.1e-115 418.7 319 65.8
Haze_17897 Corylus avellana HOM05D004272 ORTHO05D005020 5.4e-115 418.3 320 65.9
AL2G31440 Arabidopsis lyrata HOM05D004272 ORTHO05D005020 9.2e-115 417.5 310 67.7
Actinidia02597 Actinidia chinensis HOM05D004272 ORTHO05D005020 2.0e-114 416.4 317 67.5
Migut.N03339 Erythranthe guttata HOM05D004272 ORTHO05D005020 2.0e-114 416.4 292 68.2
Atru.chr13.1851 Acer truncatum HOM05D004272 ORTHO05D005020 3.5e-114 415.6 343 61.2
VMungo0720G1438 Vigna mungo HOM05D004272 ORTHO05D005020 3.5e-114 415.6 320 62.5
TPR.G15693 Trifolium pratense HOM05D004272 ORTHO05D005020 4.6e-114 415.2 316 64.9
Ca_10628_v3 Cicer arietinum L. HOM05D004272 ORTHO05D005020 7.8e-114 414.5 300 68.0
Nitab4.5_0006059g0040 Nicotiana tabacum HOM05D004272 ORTHO05D005020 7.8e-114 414.5 319 65.5
Cpa.g.sc64.134 Carica papaya HOM05D004272 ORTHO05D005020 1.7e-113 413.3 324 64.8
Medtr1g096990 Medicago truncatula HOM05D004272 ORTHO05D005020 3.0e-113 412.5 320 64.4
SalBow6G0059 Salvia bowleyana HOM05D004272 ORTHO05D005020 8.6e-113 411.0 321 65.4
SalBow6G4901 Salvia bowleyana HOM05D004272 ORTHO05D005020 8.6e-113 411.0 321 65.4
Aa31LG4G8760 Aethionema arabicum HOM05D004272 ORTHO05D005020 1.1e-112 410.6 306 66.3
FAN27G2909 Fragaria x ananassa HOM05D004272 ORTHO05D005020 3.3e-112 409.1 315 64.1
Phvul.007G087900 Phaseolus vulgaris HOM05D004272 ORTHO05D005020 3.3e-112 409.1 320 61.6
vmacro12508 Vaccinium macrocarpon HOM05D004272 ORTHO05D005020 3.3e-112 409.1 310 63.9
AT1G71860 Arabidopsis thaliana HOM05D004272 ORTHO05D005020 5.6e-112 408.3 305 67.5
FAN20G0830 Fragaria x ananassa HOM05D004272 ORTHO05D005020 7.3e-112 407.9 306 66.0
Lalb_Chr06g0161911 Lupinus albus HOM05D004272 ORTHO05D005020 9.5e-112 407.5 317 63.1
FvH4_2g12360 Fragaria vesca HOM05D004272 ORTHO05D005020 1.2e-111 407.1 306 65.4
FAN24G2414 Fragaria x ananassa HOM05D004272 ORTHO05D005020 1.2e-111 407.1 306 65.4
Glyma.10G218100 Glycine max HOM05D004272 ORTHO05D005020 1.2e-111 407.1 320 62.8
MELO3C018159.2 Cucumis melo HOM05D004272 ORTHO05D005020 6.2e-111 404.8 319 63.6
Solyc06g065480.4 Solanum lycopersicum HOM05D004272 ORTHO05D005020 6.2e-111 404.8 320 65.0
Sopen06g023970 Solanum pennellii HOM05D004272 ORTHO05D005020 8.0e-111 404.4 319 64.9
RcHm_v2.0_Chr6g0272381 Rosa chinensis HOM05D004272 ORTHO05D005020 1.1e-110 404.1 306 65.4
Rhsim06G0099300 Rhododendron simsii HOM05D004272 ORTHO05D005020 3.1e-110 402.5 366 57.7
Sopen11g008950 Solanum pennellii HOM05D004272 ORTHO05D005020 4.0e-110 402.1 331 64.7
Solyc11g016990.3 Solanum lycopersicum HOM05D004272 ORTHO05D005020 5.2e-110 401.7 331 64.0
HanXRQChr13g0388201 Helianthus annuus HOM05D004272 ORTHO05D005020 6.8e-110 401.4 301 67.4
Rhsim11G0061700 Rhododendron simsii HOM05D004272 ORTHO05D005020 1.2e-109 400.6 326 61.7
Rhsim11G0063200 Rhododendron simsii HOM05D004272 ORTHO05D005020 1.2e-109 400.6 326 61.7
Lsat_1_v5_gn_5_157280 Lactuca sativa HOM05D004272 ORTHO05D005020 1.5e-109 400.2 308 65.9
BcaC08g46620 Brassica carinata HOM05D004272 ORTHO05D005020 3.4e-109 399.1 306 66.3
C06p45930 Brassica napus HOM05D004272 ORTHO05D005020 3.4e-109 399.1 306 66.7
BolC6t39646H Brassica oleracea HOM05D004272 ORTHO05D005020 3.4e-109 399.1 306 66.3
Lj5g0022070 Lotus japonicus HOM05D004272 ORTHO05D005020 3.4e-109 399.1 323 62.8
Duzib116G0407 Durio zibethinus HOM05D004272 ORTHO05D005020 7.5e-109 397.9 379 55.1
BcaC08g46618 Brassica carinata HOM05D004272 ORTHO05D005020 9.8e-109 397.5 316 65.2
Sed0022323 Sechium edule HOM05D004272 ORTHO05D005020 1.3e-108 397.1 334 62.0
Glyma.20G173700 Glycine max HOM05D004272 ORTHO05D005020 1.7e-108 396.7 298 64.1
CsaV3_7G024250 Cucumis sativus L. HOM05D004272 ORTHO05D005020 3.7e-108 395.6 298 65.4
BraA07t31367Z Brassica rapa HOM05D004272 ORTHO05D005020 1.2e-106 390.6 308 64.6
A07p38020 Brassica napus HOM05D004272 ORTHO05D005020 2.1e-106 389.8 308 64.3
Sc01g0001660 Simmondsia chinensis HOM05D004272 ORTHO05D005020 3.5e-106 389.0 300 65.0
EL10Ac1g00062 Beta vulgaris HOM05D004272 ORTHO05D005020 4.6e-106 388.7 312 63.8
Nitab4.5_0000159g0070 Nicotiana tabacum HOM05D004272 ORTHO05D005020 1.3e-105 387.1 261 72.8
CAN.G199.25 Capsicum annuum HOM05D004272 ORTHO05D005020 5.6e-104 381.7 258 71.7
Migut.C01228 Erythranthe guttata HOM05D004272 ORTHO05D005020 7.3e-104 381.3 306 63.1
Nitab4.5_0003518g0050 Nicotiana tabacum HOM05D004272 ORTHO05D005020 6.2e-103 378.3 271 70.1
unitig_61.g26072 Utricularia gibba HOM05D004272 ORTHO05D005020 1.1e-102 377.5 293 62.1
Aqoxy6G00139 Aquilegia oxysepala HOM05D004272 ORTHO05D005020 1.4e-102 377.1 314 61.8
CARHR289070 Cardamine hirsuta HOM05D004272 ORTHO05D005020 1.4e-102 377.1 247 73.3
DCAR_014268 Daucus carota HOM05D004272 ORTHO05D005020 4.0e-102 375.6 325 59.7
Hund27072 Selenicereus undatus HOM05D004272 ORTHO05D005020 1.5e-101 373.6 293 63.8
CAN.G61.12 Capsicum annuum HOM05D004272 ORTHO05D005020 9.9e-101 370.9 241 75.1
PSO170G2262 Papaver somniferum HOM05D004272 ORTHO05D005020 1.9e-99 366.7 322 59.6
ClCG09G010370 Citrullus lanatus HOM05D004272 ORTHO05D005020 4.6e-98 362.1 296 60.8
AUR62023587 Chenopodium quinoa HOM05D004272 ORTHO05D005020 1.7e-97 360.1 243 71.6
AUR62004668 Chenopodium quinoa HOM05D004272 ORTHO05D005020 5.1e-97 358.6 235 73.6
ATR0687G002 Amborella trichopoda HOM05D004272 ORTHO05D005020 2.1e-95 353.2 296 58.1
arahy.Tifrunner.gnm1.ann1.E3548W Arachis hypogaea HOM05D004272 ORTHO05D005020 7.6e-93 344.7 217 74.7
HPP92_003132 Vanilla planifolia HOM05D004272 ORTHO05D005020 4.2e-91 339.0 307 54.4
HanXRQChr13g0388211 Helianthus annuus HOM05D004272 ORTHO05D005020 1.2e-90 337.4 291 60.8
Psat6g189360 Pisum sativum HOM05D004272 ORTHO05D005020 1.7e-89 333.6 259 63.3
TWI60G0092 Tripterygium wilfordii HOM05D004272 ORTHO05D005020 2.5e-88 329.7 307 55.4
ECA248G3752 Erigeron canadensis HOM05D004272 ORTHO05D005020 7.3e-88 328.2 303 58.4
RcHm_v2.0_Chr3g0456471 Rosa chinensis HOM05D004272 ORTHO05D005020 1.6e-87 327.0 304 58.2
SGA_v2.0_scaffold149G36610 Striga asiatica HOM05D004272 ORTHO05D005020 2.1e-87 326.6 392 46.9
Hund16809 Selenicereus undatus HOM05D004272 ORTHO05D005020 3.6e-87 325.9 312 55.4
Manes.02G190000 Manihot esculenta HOM05D004272 ORTHO05D005020 1.4e-86 323.9 198 74.2
MELO3C023674.2 Cucumis melo HOM05D004272 ORTHO05D005020 1.2e-85 320.9 250 62.4
RcHm_v2.0_Chr7g0181531 Rosa chinensis HOM05D004272 ORTHO05D005020 2.0e-85 320.1 322 56.5
PSO170G2167 Papaver somniferum HOM05D004272 ORTHO05D005020 3.4e-85 319.3 317 54.3
PSO782G4024 Papaver somniferum HOM05D004272 ORTHO05D005020 5.8e-85 318.5 310 54.5
FAN18G3209 Fragaria x ananassa HOM05D004272 ORTHO05D005020 1.6e-82 310.5 306 57.5
ECA248G0749 Erigeron canadensis HOM05D004272 ORTHO05D005020 4.6e-82 308.9 251 62.9
Ah.05g177840 Amaranthus hybridus HOM05D004272 ORTHO05D005020 1.3e-81 307.4 301 54.2
FvH4_5g14850 Fragaria vesca HOM05D004272 ORTHO05D005020 2.3e-81 306.6 306 56.5
Nn5g27830 Nelumbo nucifera HOM05D004272 ORTHO05D005020 1.1e-80 304.3 302 55.0
Hund16808 Selenicereus undatus HOM05D004272 ORTHO05D005020 3.3e-80 302.8 317 51.4
FAN08G2250 Fragaria x ananassa HOM05D004272 ORTHO05D005020 4.3e-80 302.4 306 55.6
MD09G1287400 Malus domestica HOM05D004272 ORTHO05D005020 4.3e-80 302.4 312 53.8
FAN13G2363 Fragaria x ananassa HOM05D004272 ORTHO05D005020 4.8e-79 298.9 308 55.2
vmacro00781 Vaccinium macrocarpon HOM05D004272 ORTHO05D005020 2.0e-77 293.5 389 44.0
Nitab4.5_0029014g0010 Nicotiana tabacum HOM05D004272 ORTHO05D005020 1.4e-75 287.3 257 57.2
Prupe.1G402600 Prunus persica HOM05D004272 ORTHO05D005020 6.7e-73 278.5 307 51.5
SHI09047 Sapria himalayana HOM05D004272 ORTHO05D005020 3.8e-68 262.7 299 48.2
Pp3c13_6130 Physcomitrium patens HOM05D004272 ORTHO05D005020 1.9e-64 250.4 293 45.7
Pp3c3_2290 Physcomitrium patens HOM05D004272 ORTHO05D005020 3.5e-58 229.6 297 42.8
Mapoly0167s0026 Marchantia polymorpha HOM05D004272 ORTHO05D005020 7.4e-56 221.9 302 42.1
Os12g0174800 Oryza sativa ssp. japonica HOM05D004272 ORTHO05D005020 6.3e-55 218.8 291 42.3
PGSC0003DMG400024543 Solanum tuberosum HOM05D004272 ORTHO05D005020 1.4e-54 217.6 155 69.7
Potri.019G086001 Populus trichocarpa HOM05D004272 ORTHO05D005020 4.1e-54 216.1 139 70.5
SMO347G0125 Selaginella moellendorffii HOM05D004272 ORTHO05D005020 3.2e-51 206.5 289 41.2
Os11g0180200 Oryza sativa ssp. japonica HOM05D004272 ORTHO05D005020 4.2e-51 206.1 236 49.6
SGA_v2.0_scaffold483G52343 Striga asiatica HOM05D004272 ORTHO05D005020 1.4e-49 201.1 133 70.7
Dinv41680 Davidia involucrata HOM05D004272 ORTHO05D005020 2.0e-48 197.2 113 83.2
CDE12G0366 Ceratophyllum demersum HOM05D004272 ORTHO05D005020 7.2e-43 178.7 255 40.8
CBR_g17924 Chara braunii HOM05D004272 ORTHO05D005020 1.2e-42 177.9 195 44.1
Zm00001eb138930 Zea mays HOM05D004272 ORTHO05D005020 1.0e-41 174.9 243 43.6
AagrBONN_evm.TU.Sc2ySwM_228.1486 Anthoceros agrestis HOM05D004272 ORTHO05D005020 2.0e-40 170.6 240 39.6
SEGI_33079 Sequoiadendron giganteum HOM05D004272 ORTHO05D005020 6.3e-39 165.6 147 53.1
Cre12.g524450 Chlamydomonas reinhardtii HOM05D004272 ORTHO05D005020 4.5e-37 159.5 288 36.1
Zm00001eb091350 Zea mays HOM05D004272 ORTHO05D005020 1.9e-35 154.1 291 38.5
TPR.G15698 Trifolium pratense HOM05D004272 ORTHO05D005020 3.0e-33 146.7 101 66.3
CBR_g49956 Chara braunii HOM05D004272 ORTHO05D005020 1.1e-30 138.3 215 40.5
Haze_26549 Corylus avellana HOM05D004272 ORTHO05D005020 1.2e-26 124.8 297 30.0
Haze_26606 Corylus avellana HOM05D004272 ORTHO05D005020 1.5e-24 117.9 260 31.5
SEGI_21150 Sequoiadendron giganteum HOM05D004272 ORTHO05D005020 6.3e-23 112.5 84 63.1
PRCOL_00003935 Prasinoderma coloniale HOM05D004272 ORTHO05D005020 7.0e-22 109.0 290 32.4
PSO170G3665 Papaver somniferum HOM05D004272 ORTHO05D005020 1.2e-21 108.2 211 35.1
Cre09.g389949 Chlamydomonas reinhardtii HOM05D004272 ORTHO05D005020 2.0e-21 107.5 343 28.0
SMO119G0089 Selaginella moellendorffii HOM05D004272 ORTHO05D005020 2.2e-20 104.0 213 32.9
SMO166G0076 Selaginella moellendorffii HOM05D004272 ORTHO05D005020 1.2e-18 98.2 254 28.0
Cfa022797 Carpinus fangiana HOM05D004272 ORTHO05D005020 1.5e-16 91.3 322 25.8
Cfa026335 Carpinus fangiana HOM05D003314 ORTHO05D004164 4.4e-16 89.7 289 28.7
CBR_g53619 Chara braunii HOM05D004272 ORTHO05D005020 3.7e-15 86.7 102 39.2
SMO351G0156 Selaginella moellendorffii HOM05D004272 ORTHO05D005020 6.3e-15 85.9 147 36.1
CBR_g53623 Chara braunii HOM05D004272 ORTHO05D005020 1.4e-14 84.7 101 37.6
SGA_v2.0_scaffold1053G53812 Striga asiatica HOM05D004272 ORTHO05D005020 1.2e-13 81.6 54 70.4
SGA_v2.0_scaffold322G48619 Striga asiatica HOM05D004272 ORTHO05D005020 1.2e-13 81.6 54 70.4
SGA_v2.0_scaffold386G50488 Striga asiatica HOM05D004272 ORTHO05D005020 2.7e-13 80.5 54 68.5
SMO115G0188 Selaginella moellendorffii HOM05D004272 ORTHO05D005020 3.5e-13 80.1 161 29.2
Glyma.20G173900 Glycine max HOM05D004272 ORTHO05D005020 3.3e-11 73.6 57 61.4
Glyma.20G173800 Glycine max HOM05D004272 ORTHO05D005020 2.8e-10 70.5 100 44.0
Psat6g014560 Pisum sativum HOM05D004272 ORTHO05D005020 6.4e-07 59.3 47 57.4
CARHR290880 Cardamine hirsuta HOM05D004272 ORTHO05D005020 2.4e-06 57.4 87 44.8


User provided reference genes

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