Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_010060 Daucus carota HOM05D007934 ORTHO05D010067 1.4e-128 463.0 244 100.0
COL.COLO4_06792 Corchorus olitorius HOM05D007934 ORTHO05D010067 3.4e-66 255.8 242 59.5
CSS0014535 Camellia sinensis var. sinensis HOM05D007934 ORTHO05D010067 7.7e-66 254.6 223 62.3
FAN12G0351 Fragaria x ananassa HOM05D007934 ORTHO05D010067 1.7e-65 253.4 233 58.8
FvH4_4g12460 Fragaria vesca HOM05D007934 ORTHO05D010067 2.2e-65 253.1 233 58.8
RcHm_v2.0_Chr4g0410771 Rosa chinensis HOM05D007934 ORTHO05D010067 2.2e-65 253.1 232 58.2
QL06p027793 Quercus lobata HOM05D007934 ORTHO05D010067 5.0e-65 251.9 226 58.8
FAN17G0103 Fragaria x ananassa HOM05D007934 ORTHO05D010067 1.9e-64 250.0 233 58.4
Cfa008702 Carpinus fangiana HOM05D007934 ORTHO05D010067 3.2e-64 249.2 229 58.5
Thecc.04G187000 Theobroma cacao HOM05D007934 ORTHO05D010067 1.2e-63 247.3 225 58.2
TPR.G2903 Trifolium pratense HOM05D000246 ORTHO05D005907 1.6e-63 246.9 233 57.1
Duzib268G0160 Durio zibethinus HOM05D007934 ORTHO05D010067 4.7e-63 245.4 219 60.3
Medtr7g021860 Medicago truncatula HOM05D007934 ORTHO05D010067 6.1e-63 245.0 232 58.6
Glyma.09G276700 Glycine max HOM05D007934 ORTHO05D010067 8.8e-62 241.1 229 55.5
Manes.13G117300 Manihot esculenta HOM05D007934 ORTHO05D010067 8.8e-62 241.1 227 57.3
Psat3g187720 Pisum sativum HOM05D007934 ORTHO05D010067 1.1e-61 240.7 217 57.6
Lalb_Chr10g0092091 Lupinus albus HOM05D007934 ORTHO05D010067 1.5e-61 240.4 232 59.1
MD04G1026300 Malus domestica HOM05D007934 ORTHO05D010067 1.3e-60 237.3 239 56.9
Solyc09g098115.1 Solanum lycopersicum HOM05D007934 ORTHO05D010067 1.4e-59 233.8 228 55.3
Sabra14G0111200 Salix brachista HOM05D007934 ORTHO05D010067 5.3e-59 231.9 235 57.9
Lj1g0008563 Lotus japonicus HOM05D007934 ORTHO05D010067 1.2e-58 230.7 232 53.9
Aqoxy2G00204 Aquilegia oxysepala HOM05D007934 ORTHO05D010067 2.6e-58 229.6 234 56.4
CiPaw.02G060500 Carya illinoinensis HOM05D007934 ORTHO05D010067 4.5e-58 228.8 229 54.1
Prupe.1G176000 Prunus persica HOM05D007934 ORTHO05D010067 1.0e-57 227.6 226 55.8
Prupe.2G050500 Prunus persica HOM05D007934 ORTHO05D010067 2.9e-57 226.1 226 55.3
Lsat_1_v5_gn_6_58060 Lactuca sativa HOM05D007934 ORTHO05D010067 6.5e-57 224.9 228 52.2
Phvul.008G084200 Phaseolus vulgaris HOM05D007934 ORTHO05D010067 5.5e-56 221.9 209 54.1
MBI07_g12253_MAGBIO Magnolia biondii HOM05D007934 ORTHO05D010067 3.6e-55 219.2 231 54.5
Atru.chr2.1662 Acer truncatum HOM05D007934 ORTHO05D010067 1.8e-54 216.9 216 55.6
HanXRQChr11g0341381 Helianthus annuus HOM05D007934 ORTHO05D010067 3.0e-54 216.1 231 51.5
FAN07G0267 Fragaria x ananassa HOM05D007934 ORTHO05D010067 4.0e-54 215.7 233 53.6
CANSAT78G1949 Cannabis sativa HOM05D007934 ORTHO05D010067 1.2e-53 214.2 255 51.0
Atru.chr2.1676 Acer truncatum HOM05D007934 ORTHO05D010067 3.3e-53 212.6 216 55.1
Ciclev10033502m.g Citrus clementina HOM05D007934 ORTHO05D010067 5.7e-53 211.8 222 53.2
VMungo1383G3460 Vigna mungo HOM05D007934 ORTHO05D010067 1.7e-52 210.3 215 51.6
PGSC0003DMG400006568 Solanum tuberosum HOM05D007934 ORTHO05D010067 4.8e-52 208.8 194 59.3
A06p07590 Brassica napus HOM05D007934 ORTHO05D010067 5.3e-51 205.3 224 51.8
BraA06t23961Z Brassica rapa HOM05D007934 ORTHO05D010067 5.3e-51 205.3 224 51.8
Sopen09g036060 Solanum pennellii HOM05D007934 ORTHO05D010067 7.0e-51 204.9 194 57.2
CARHR011020 Cardamine hirsuta HOM05D007934 ORTHO05D010067 2.0e-50 203.4 230 50.4
Gorai.009G351500 Gossypium raimondii HOM05D007934 ORTHO05D010067 2.7e-50 203.0 224 53.1
Gohir.D05G327600 Gossypium hirsutum HOM05D007934 ORTHO05D010067 7.7e-50 201.4 224 52.7
BcaC05g24952 Brassica carinata HOM05D007934 ORTHO05D010067 1.0e-49 201.1 244 49.6
Thhalv10009458m.g Eutrema salsugineum HOM05D007934 ORTHO05D010067 3.8e-49 199.1 226 52.2
AT1G10800 Arabidopsis thaliana HOM05D007934 ORTHO05D010067 8.5e-49 198.0 217 52.1
Gohir.A05G327400 Gossypium hirsutum HOM05D007934 ORTHO05D010067 1.1e-48 197.6 219 53.0
THA.LOC104809589 Tarenaya hassleriana HOM05D007934 ORTHO05D010067 1.1e-48 197.6 214 51.4
Sp1g09500 Schrenkiella parvula HOM05D007934 ORTHO05D010067 4.2e-48 195.7 222 52.3
C05p09150 Brassica napus HOM05D007934 ORTHO05D010067 9.4e-48 194.5 223 51.1
BolC5t29659H Brassica oleracea HOM05D007934 ORTHO05D010067 1.6e-47 193.7 223 50.7
Carub.0001s1035 Capsella rubella HOM05D007934 ORTHO05D010067 8.0e-47 191.4 225 50.2
ClCG08G003680 Citrullus lanatus HOM05D007934 ORTHO05D010067 1.7e-44 183.7 221 52.0
PGR142G0659 Punica granatum HOM05D007934 ORTHO05D010067 1.7e-44 183.7 207 49.8
MELO3C026115.2 Cucumis melo HOM05D007934 ORTHO05D010067 4.1e-43 179.1 197 51.3
Dinv27156 Davidia involucrata HOM05D007934 ORTHO05D010067 4.1e-43 179.1 144 65.3
Potri.014G147600 Populus trichocarpa HOM05D007934 ORTHO05D010067 7.7e-42 174.9 191 56.5
PSO170G0593 Papaver somniferum HOM05D007934 ORTHO05D010067 6.6e-41 171.8 172 55.8
Ah.04g149820 Amaranthus hybridus HOM05D007934 ORTHO05D010067 3.3e-40 169.5 172 55.2
Nn1g08266 Nelumbo nucifera HOM05D007934 ORTHO05D010067 3.3e-40 169.5 161 60.9
CDE02G1388 Ceratophyllum demersum HOM05D007934 ORTHO05D010067 7.2e-40 168.3 195 45.1
Eucgr.H00465 Eucalyptus grandis HOM05D007934 ORTHO05D010067 2.8e-36 156.4 165 55.2
CAN.G681.52 Capsicum annuum HOM05D007934 ORTHO05D010067 2.8e-31 139.8 121 62.8
Actinidia32959 Actinidia chinensis HOM05D007934 ORTHO05D010067 8.0e-31 138.3 160 51.9
SEGI_13791 Sequoiadendron giganteum HOM05D007934 ORTHO05D010067 7.5e-29 131.7 230 35.7
Mapoly0034s0074 Marchantia polymorpha HOM05D007934 ORTHO05D010067 7.3e-24 115.2 241 32.0
AUR62026200 Chenopodium quinoa HOM05D007934 ORTHO05D010067 1.8e-22 110.5 102 56.9
TAR636G1845 Trochodendron aralioides HOM05D007934 ORTHO05D010067 1.8e-22 110.5 116 55.2
AL1G21730 Arabidopsis lyrata HOM05D007934 ORTHO05D010067 4.0e-22 109.4 107 54.2
AagrBONN_evm.TU.Sc2ySwM_368.2439 Anthoceros agrestis HOM05D007934 ORTHO05D010067 5.8e-21 105.5 203 33.5
Mapoly0012s0008 Marchantia polymorpha HOM05D007934 ORTHO05D010067 3.9e-17 92.8 194 36.1
Mapoly0007s0045 Marchantia polymorpha HOM05D007934 ORTHO05D010067 8.6e-17 91.7 194 34.0
Pp3c2_28920 Physcomitrium patens HOM05D007934 ORTHO05D010067 1.1e-16 91.3 202 33.2
Pp3c2_28960 Physcomitrium patens HOM05D007934 ORTHO05D010067 1.1e-16 91.3 202 33.2
TAR636G3543 Trochodendron aralioides HOM05D007934 ORTHO05D010067 1.6e-15 87.4 64 68.8
CsaV3_6G003110 Cucumis sativus L. HOM05D007934 ORTHO05D010067 2.3e-14 83.6 99 46.5
SMO356G0271 Selaginella moellendorffii HOM05D007934 ORTHO05D010067 4.0e-14 82.8 119 41.2
AUR62018491 Chenopodium quinoa HOM05D007934 ORTHO05D010879 1.5e-13 80.9 64 65.6
Pp3c7_26640 Physcomitrium patens HOM05D007934 ORTHO05D010067 2.9e-12 76.6 140 35.0
Cfa002814 Carpinus fangiana HOM05D007934 ORTHO05D010067 3.0e-09 66.6 55 58.2


User provided reference genes

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