Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_010017 Daucus carota HOM05D007184 ORTHO05D008987 2.2e-49 198.7 107 100.0
Gohir.D13G146000 Gossypium hirsutum HOM05D007184 ORTHO05D008987 1.3e-41 172.9 107 86.0
Gohir.A13G141300 Gossypium hirsutum HOM05D007184 ORTHO05D008987 2.2e-41 172.2 107 86.0
Gorai.013G163800 Gossypium raimondii HOM05D007184 ORTHO05D008987 2.2e-41 172.2 107 86.0
COL.COLO4_09571 Corchorus olitorius HOM05D007184 ORTHO05D008987 3.8e-41 171.4 107 86.0
Cpa.g.sc97.69 Carica papaya HOM05D007184 ORTHO05D008987 4.9e-41 171.0 106 85.8
HanXRQChr05g0159221 Helianthus annuus HOM05D007184 ORTHO05D008987 8.4e-41 170.2 107 84.1
Thecc.07G052800 Theobroma cacao HOM05D007184 ORTHO05D008987 8.4e-41 170.2 107 85.0
Oeu062614.1 Olea europaea HOM05D007184 ORTHO05D008987 1.1e-40 169.9 107 84.1
Cfa020415 Carpinus fangiana HOM05D007184 ORTHO05D008987 1.4e-40 169.5 107 85.0
Sabra11G0119700 Salix brachista HOM05D007184 ORTHO05D008987 1.4e-40 169.5 107 85.0
Cc05_g13240 Coffea canephora HOM05D007184 ORTHO05D008987 2.4e-40 168.7 107 83.2
Manes.03G122800 Manihot esculenta HOM05D007184 ORTHO05D008987 3.2e-40 168.3 107 85.0
CARHR041120 Cardamine hirsuta HOM05D007184 ORTHO05D008987 4.1e-40 167.9 107 81.3
Lj3g0025244 Lotus japonicus HOM05D007184 ORTHO05D008987 7.1e-40 167.2 106 84.9
Potri.011G132900 Populus trichocarpa HOM05D007184 ORTHO05D008987 7.1e-40 167.2 107 85.0
Nitab4.5_0000397g0060 Nicotiana tabacum HOM05D007184 ORTHO05D008987 1.2e-39 166.4 107 84.1
Peaxi162Scf01086g00015 Petunia axillaris HOM05D007184 ORTHO05D008987 1.2e-39 166.4 107 84.1
SalBow7G0016 Salvia bowleyana HOM05D007184 ORTHO05D008987 1.2e-39 166.4 107 82.2
Hma1.2p1_1869F.1_g306030 Hydrangea macrophylla HOM05D007184 ORTHO05D008987 1.6e-39 166.0 107 82.2
Nn1g03662 Nelumbo nucifera HOM05D007184 ORTHO05D008987 1.6e-39 166.0 107 81.3
EL10Ac4g07971 Beta vulgaris HOM05D007184 ORTHO05D008987 2.7e-39 165.2 107 82.2
CiPaw.11G183700 Carya illinoinensis HOM05D007184 ORTHO05D008987 2.7e-39 165.2 107 83.2
Duzib268G1070 Durio zibethinus HOM05D007184 ORTHO05D008987 2.7e-39 165.2 107 82.2
AUR62015645 Chenopodium quinoa HOM05D007184 ORTHO05D008987 3.5e-39 164.9 107 82.2
AUR62020554 Chenopodium quinoa HOM05D007184 ORTHO05D008987 3.5e-39 164.9 107 82.2
MELO3C016627.2 Cucumis melo HOM05D007184 ORTHO05D008987 3.5e-39 164.9 107 82.2
Nitab4.5_0009192g0030 Nicotiana tabacum HOM05D007184 ORTHO05D008987 3.5e-39 164.9 107 83.2
THA.LOC104817896 Tarenaya hassleriana HOM05D007184 ORTHO05D008987 3.5e-39 164.9 107 82.2
CsaV3_3G005480 Cucumis sativus L. HOM05D007184 ORTHO05D008987 4.6e-39 164.5 107 82.2
TPR.G36807 Trifolium pratense HOM05D007184 ORTHO05D008987 4.6e-39 164.5 106 83.0
ECA246G2094 Erigeron canadensis HOM05D003993 ORTHO05D005336 6.0e-39 164.1 107 80.4
Solyc07g064100.1 Solanum lycopersicum HOM05D007184 ORTHO05D008987 6.0e-39 164.1 107 81.3
Sopen07g032240 Solanum pennellii HOM05D007184 ORTHO05D008987 6.0e-39 164.1 107 81.3
PGSC0003DMG400019260 Solanum tuberosum HOM05D007184 ORTHO05D008987 6.0e-39 164.1 107 81.3
VMungo1080G0323 Vigna mungo HOM05D007184 ORTHO05D008987 6.0e-39 164.1 106 84.9
AL1G58900 Arabidopsis lyrata HOM05D007184 ORTHO05D008987 7.8e-39 163.7 107 80.4
AT1G51100 Arabidopsis thaliana HOM05D007184 ORTHO05D008987 7.8e-39 163.7 107 80.4
Lalb_Chr14g0366141 Lupinus albus HOM05D007184 ORTHO05D008987 1.0e-38 163.3 107 80.4
Medtr2g082930 Medicago truncatula HOM05D007184 ORTHO05D008987 1.0e-38 163.3 107 80.4
Thhalv10011779m.g Eutrema salsugineum HOM05D007184 ORTHO05D008987 1.3e-38 162.9 107 80.4
MD03G1211500 Malus domestica HOM05D007184 ORTHO05D008987 1.3e-38 162.9 107 81.3
arahy.Tifrunner.gnm1.ann1.538Z4G Arachis hypogaea HOM05D007184 ORTHO05D008987 1.7e-38 162.5 107 81.3
ClCG10G005800 Citrullus lanatus HOM05D007184 ORTHO05D008987 1.7e-38 162.5 107 80.4
FAN21G0378 Fragaria x ananassa HOM05D007184 ORTHO05D008987 1.7e-38 162.5 107 82.2
FAN25G3727 Fragaria x ananassa HOM05D007184 ORTHO05D008987 1.7e-38 162.5 107 82.2
BcaB07g33556 Brassica carinata HOM05D007184 ORTHO05D008987 3.9e-38 161.4 107 79.4
BcaC08g43280 Brassica carinata HOM05D007184 ORTHO05D008987 3.9e-38 161.4 107 79.4
A06p02680 Brassica napus HOM05D007184 ORTHO05D008987 3.9e-38 161.4 107 79.4
C06p06300 Brassica napus HOM05D007184 ORTHO05D008987 3.9e-38 161.4 107 79.4
BolC6t35739H Brassica oleracea HOM05D007184 ORTHO05D008987 3.9e-38 161.4 107 79.4
FvH4_3g21830 Fragaria vesca HOM05D007184 ORTHO05D008987 3.9e-38 161.4 107 81.3
FAN11G2616 Fragaria x ananassa HOM05D007184 ORTHO05D008987 3.9e-38 161.4 107 81.3
Prupe.4G202500 Prunus persica HOM05D007184 ORTHO05D008987 3.9e-38 161.4 107 80.4
Ca_01753_v3 Cicer arietinum L. HOM05D007184 ORTHO05D008987 5.1e-38 161.0 108 83.3
Psat5g251800 Pisum sativum HOM05D007184 ORTHO05D008987 5.1e-38 161.0 108 83.3
Glyma.12G214300 Glycine max HOM05D007184 ORTHO05D008987 6.6e-38 160.6 107 81.3
Atru.BG.150.p Acer truncatum HOM05D007184 ORTHO05D008987 8.6e-38 160.2 103 82.5
Carub.0001s4001 Capsella rubella HOM05D007184 ORTHO05D008987 8.6e-38 160.2 107 79.4
Ciclev10009433m.g Citrus clementina HOM05D007184 ORTHO05D008987 8.6e-38 160.2 107 79.4
Lsat_1_v5_gn_5_5700 Lactuca sativa HOM05D003993 ORTHO05D005336 8.6e-38 160.2 107 80.4
PGR031G2970 Punica granatum HOM05D007184 ORTHO05D008987 8.6e-38 160.2 106 78.3
BraA06t23477Z Brassica rapa HOM05D007184 ORTHO05D008987 1.1e-37 159.8 107 78.5
CANSAT11G2419 Cannabis sativa HOM05D007184 ORTHO05D008987 1.1e-37 159.8 107 78.5
RcHm_v2.0_Chr4g0410121 Rosa chinensis HOM05D007184 ORTHO05D008987 1.1e-37 159.8 107 80.4
Sp1g37830 Schrenkiella parvula HOM05D007184 ORTHO05D008987 1.1e-37 159.8 107 79.4
Migut.H01857 Erythranthe guttata HOM05D007184 ORTHO05D008987 1.5e-37 159.5 107 80.4
QL08p013337 Quercus lobata HOM05D007184 ORTHO05D008987 1.9e-37 159.1 106 79.2
RcHm_v2.0_Chr5g0037571 Rosa chinensis HOM05D007184 ORTHO05D008987 2.5e-37 158.7 107 80.4
TWI38G1172 Tripterygium wilfordii HOM05D007184 ORTHO05D008987 2.5e-37 158.7 107 79.4
Phvul.005G091600 Phaseolus vulgaris HOM05D007184 ORTHO05D008987 4.3e-37 157.9 106 83.0
Glyma.13G287300 Glycine max HOM05D007184 ORTHO05D008987 5.6e-37 157.5 107 80.4
QL08p013467 Quercus lobata HOM05D007184 ORTHO05D008987 5.6e-37 157.5 106 77.4
CSS0032425 Camellia sinensis var. sinensis HOM05D007184 ORTHO05D008987 7.3e-37 157.1 107 78.5
CSS0036378 Camellia sinensis var. sinensis HOM05D007184 ORTHO05D008987 7.3e-37 157.1 107 78.5
Lj1P863T33 Lonicera japonica HOM05D007184 ORTHO05D008987 1.2e-36 156.4 107 77.6
TAR624G0273 Trochodendron aralioides HOM05D007184 ORTHO05D008987 1.6e-36 156.0 107 75.7
CDE05G0960 Ceratophyllum demersum HOM05D007184 ORTHO05D008987 2.0e-34 149.1 107 72.9
unitig_52.g17357 Utricularia gibba HOM05D007184 ORTHO05D008987 9.9e-34 146.7 107 73.8
MBI12_g14496_MAGBIO Magnolia biondii HOM05D007184 ORTHO05D008987 1.7e-33 146.0 108 74.1
Eucgr.F03426 Eucalyptus grandis HOM05D007184 ORTHO05D008987 2.2e-33 145.6 105 73.3
QL08p013286 Quercus lobata HOM05D007184 ORTHO05D008987 2.2e-33 145.6 106 74.5
Aa31LG10G3410 Aethionema arabicum HOM05D006358 ORTHO05D008185 8.4e-33 143.7 95 81.1
PSO675G5359 Papaver somniferum HOM05D007184 ORTHO05D008987 8.4e-33 143.7 108 75.0
PSO541G2827 Papaver somniferum HOM05D007184 ORTHO05D008987 1.1e-32 143.3 108 74.1
ClCG03G004100 Citrullus lanatus HOM05D007184 ORTHO05D008987 1.9e-32 142.5 107 73.8
ATR0073G001 Amborella trichopoda HOM05D007184 ORTHO05D008987 2.4e-32 142.1 107 68.2
GSVIVG01014606001 Vitis vinifera HOM05D007184 ORTHO05D008987 3.2e-32 141.7 94 78.7
QL08p013784 Quercus lobata HOM05D007184 ORTHO05D008987 1.2e-31 139.8 107 73.8
Aqoxy4G02072 Aquilegia oxysepala HOM05D007184 ORTHO05D008987 2.7e-31 138.7 97 73.2
Sed0004555 Sechium edule HOM05D007184 ORTHO05D008987 1.0e-30 136.7 108 70.4
Haze_09610 Corylus avellana HOM05D007184 ORTHO05D008987 2.3e-30 135.6 99 74.7
CDE11G0483 Ceratophyllum demersum HOM05D007184 ORTHO05D008987 3.1e-27 125.2 95 69.5
Os01g0676200 Oryza sativa ssp. japonica HOM05D007184 ORTHO05D008987 1.5e-26 122.9 108 63.0
Zm00001eb156870 Zea mays HOM05D007184 ORTHO05D008987 2.0e-26 122.5 108 63.0
QL08p060543 Quercus lobata HOM05D000807 ORTHO05D008987 2.6e-26 122.1 82 79.3
QL08p060183 Quercus lobata HOM05D000807 ORTHO05D008987 1.7e-25 119.4 82 78.0
Nn1g08505 Nelumbo nucifera HOM05D007184 ORTHO05D008987 4.3e-21 104.8 86 62.8
Potri.001G417350 Populus trichocarpa HOM05D007184 ORTHO05D008987 2.1e-20 102.4 74 73.0
Sc03g0008930 Simmondsia chinensis HOM05D007184 ORTHO05D008987 6.2e-20 100.9 102 60.8
Lju3590C0T1 Lonicera japonica HOM05D007184 ORTHO05D008987 1.1e-16 90.1 58 79.3
SEGI_35792 Sequoiadendron giganteum HOM05D007184 ORTHO05D008987 1.2e-15 86.7 106 43.4
EL10Ac1g02068 Beta vulgaris HOM05D007184 ORTHO05D008987 1.6e-15 86.3 60 75.0
FvH4_7g08050 Fragaria vesca HOM05D007184 ORTHO05D008987 3.1e-11 72.0 48 77.1
FAN01G2498 Fragaria x ananassa HOM05D007184 ORTHO05D008987 5.3e-11 71.2 46 80.4
Mapoly0032s0044 Marchantia polymorpha HOM05D007184 ORTHO05D008987 1.0e-09 67.0 107 42.1
Pp3c11_19690 Physcomitrium patens HOM05D007184 ORTHO05D008987 1.3e-09 66.6 104 34.6
CBR_g19283 Chara braunii HOM05D007184 ORTHO05D008987 6.0e-07 57.8 102 33.3
FAN06G0875 Fragaria x ananassa HOM05D007184 ORTHO05D008987 1.0e-06 57.0 37 75.7


User provided reference genes

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