Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_009977 Daucus carota HOM05D004279 ORTHO05D004979 2.6e-161 572.0 292 100.0
DCAR_022481 Daucus carota HOM05D004279 ORTHO05D004979 5.6e-140 501.1 293 86.3
Lj1A851T62 Lonicera japonica HOM05D004279 ORTHO05D004979 2.7e-134 482.3 294 83.7
Dinv22371 Davidia involucrata HOM05D004279 ORTHO05D004979 3.3e-132 475.3 294 83.0
Aqoxy4G01310 Aquilegia oxysepala HOM05D004279 ORTHO05D004979 2.4e-130 469.2 296 81.1
CSS0001500 Camellia sinensis var. sinensis HOM05D004279 ORTHO05D004979 3.1e-130 468.8 294 81.3
Lsat_1_v5_gn_5_7280 Lactuca sativa HOM05D004279 ORTHO05D004979 3.4e-129 465.3 295 79.3
HanXRQChr05g0156561 Helianthus annuus HOM05D004279 ORTHO05D004979 9.3e-127 457.2 295 78.6
Nn1g03957 Nelumbo nucifera HOM05D004279 ORTHO05D004979 7.9e-126 454.1 294 79.9
TAR626G0357 Trochodendron aralioides HOM05D004279 ORTHO05D004979 1.3e-125 453.4 294 78.6
Hma1.2p1_1274F.1_g271930 Hydrangea macrophylla HOM05D004279 ORTHO05D004979 5.1e-125 451.4 290 78.6
Nn1g06689 Nelumbo nucifera HOM05D004279 ORTHO05D004979 1.6e-123 446.4 282 80.9
Rhsim04G0018800 Rhododendron simsii HOM05D004279 ORTHO05D004979 2.2e-123 446.0 293 79.2
Actinidia35269 Actinidia chinensis HOM05D004279 ORTHO05D004979 2.8e-123 445.7 295 77.3
Dinv08329 Davidia involucrata HOM05D004279 ORTHO05D004979 5.3e-122 441.4 277 81.9
PSO210G3340 Papaver somniferum HOM05D004279 ORTHO05D004979 2.6e-121 439.1 296 76.7
CSS0025917 Camellia sinensis var. sinensis HOM05D004279 ORTHO05D004979 7.7e-121 437.6 290 76.9
ECA236G3281 Erigeron canadensis HOM05D004279 ORTHO05D004979 1.0e-120 437.2 290 76.6
PSO832G3402 Papaver somniferum HOM05D004279 ORTHO05D004979 5.0e-120 434.9 296 75.7
Nitab4.5_0000815g0050 Nicotiana tabacum HOM05D004279 ORTHO05D004979 1.1e-119 433.7 293 75.4
HanXRQChr13g0386401 Helianthus annuus HOM05D004279 ORTHO05D004979 2.5e-119 432.6 290 75.2
Peaxi162Scf01111g00012 Petunia axillaris HOM05D004279 ORTHO05D004979 4.2e-119 431.8 293 75.8
Hma1.2p1_1143F.1_g261130 Hydrangea macrophylla HOM05D004279 ORTHO05D004979 1.6e-118 429.9 290 75.9
Solyc07g063460.3 Solanum lycopersicum HOM05D004279 ORTHO05D004979 1.8e-117 426.4 293 72.7
Sopen07g031640 Solanum pennellii HOM05D004279 ORTHO05D004979 1.8e-117 426.4 293 72.7
CANSAT11G2237 Cannabis sativa HOM05D004279 ORTHO05D004979 3.9e-117 425.2 294 73.5
Cc05_g12550 Coffea canephora HOM05D004279 ORTHO05D004979 6.7e-117 424.5 300 74.0
PGSC0003DMG400019253 Solanum tuberosum HOM05D004279 ORTHO05D004979 1.5e-116 423.3 293 73.0
Nitab4.5_0009177g0010 Nicotiana tabacum HOM05D004279 ORTHO05D004979 4.3e-116 421.8 293 74.1
TAR624G0257 Trochodendron aralioides HOM05D004279 ORTHO05D004979 7.4e-116 421.0 278 78.4
Migut.H01911 Erythranthe guttata HOM05D004279 ORTHO05D004979 1.3e-115 420.2 300 74.3
QL08p019074 Quercus lobata HOM05D004279 ORTHO05D004979 1.7e-115 419.9 295 73.9
TWI38G1973 Tripterygium wilfordii HOM05D004279 ORTHO05D004979 1.7e-115 419.9 285 73.3
TWI39G0076 Tripterygium wilfordii HOM05D004279 ORTHO05D004979 4.8e-115 418.3 285 74.0
Potri.001G405200 Populus trichocarpa HOM05D004279 ORTHO05D004979 6.3e-115 417.9 292 72.9
Haze_09505 Corylus avellana HOM05D004279 ORTHO05D004979 1.1e-114 417.2 295 74.9
Cfa020528 Carpinus fangiana HOM05D004279 ORTHO05D004979 1.8e-114 416.4 295 74.6
CiPaw.12G122100 Carya illinoinensis HOM05D004279 ORTHO05D004979 4.1e-114 415.2 293 74.4
Manes.03G114800 Manihot esculenta HOM05D004279 ORTHO05D004979 4.1e-114 415.2 297 71.4
COL.COLO4_09461 Corchorus olitorius HOM05D004279 ORTHO05D004979 5.3e-114 414.8 289 73.0
Gohir.D01G054400 Gossypium hirsutum HOM05D004279 ORTHO05D004979 6.9e-114 414.5 289 73.0
Gorai.002G074300 Gossypium raimondii HOM05D004279 ORTHO05D004979 6.9e-114 414.5 289 73.0
Cpa.g.sc80.101 Carica papaya HOM05D004279 ORTHO05D004979 9.1e-114 414.1 290 73.1
Duzib213G0014 Durio zibethinus HOM05D004279 ORTHO05D004979 9.1e-114 414.1 289 72.7
Actinidia18754 Actinidia chinensis HOM05D002936 ORTHO05D004979 2.0e-113 412.9 283 75.6
CiPaw.11G174600 Carya illinoinensis HOM05D004279 ORTHO05D004979 5.9e-113 411.4 289 73.7
Duzib268G0928 Durio zibethinus HOM05D004279 ORTHO05D004979 7.7e-113 411.0 289 72.0
Gohir.A01G067200 Gossypium hirsutum HOM05D004279 ORTHO05D004979 1.0e-112 410.6 289 72.7
PGR031G2155 Punica granatum HOM05D004279 ORTHO05D004979 1.7e-112 409.8 290 71.7
CARHR267680 Cardamine hirsuta HOM05D004279 ORTHO05D004979 2.9e-112 409.1 290 74.1
Sabra16G0266200 Salix brachista HOM05D004279 ORTHO05D004979 2.9e-112 409.1 292 70.9
MSTRG.12925 Avicennia marina HOM05D004279 ORTHO05D004979 3.8e-112 408.7 300 69.7
MSTRG.14375 Avicennia marina HOM05D004279 ORTHO05D004979 3.8e-112 408.7 300 70.0
BcaC09g48518 Brassica carinata HOM05D004279 ORTHO05D004979 3.8e-112 408.7 289 74.0
CARHR090590 Cardamine hirsuta HOM05D004279 ORTHO05D004979 3.8e-112 408.7 289 74.0
Psat4g016400 Pisum sativum HOM05D004279 ORTHO05D004979 3.8e-112 408.7 291 73.5
Thecc.07G074500 Theobroma cacao HOM05D004279 ORTHO05D004979 3.8e-112 408.7 289 72.3
Thhalv10021257m.g Eutrema salsugineum HOM05D004279 ORTHO05D004979 5.0e-112 408.3 289 74.0
Manes.15G084500 Manihot esculenta HOM05D004279 ORTHO05D004979 5.0e-112 408.3 297 70.4
TPR.G38955 Trifolium pratense HOM05D004279 ORTHO05D004979 6.5e-112 407.9 291 72.9
CSS0045555 Camellia sinensis var. sinensis HOM05D004279 ORTHO05D004979 8.5e-112 407.5 290 73.4
AT3G15530 Arabidopsis thaliana HOM05D004279 ORTHO05D004979 1.1e-111 407.1 289 73.7
BolC1t04855H Brassica oleracea HOM05D004279 ORTHO05D004979 1.1e-111 407.1 289 73.7
Carub.0003s1526 Capsella rubella HOM05D004279 ORTHO05D004979 1.1e-111 407.1 289 73.7
Gorai.009G432300 Gossypium raimondii HOM05D004279 ORTHO05D004979 1.1e-111 407.1 289 71.6
Ca_01814_v3 Cicer arietinum L. HOM05D004279 ORTHO05D004979 1.4e-111 406.8 291 72.5
Ca_30536_v3 Cicer arietinum L. HOM05D004279 ORTHO05D004979 1.4e-111 406.8 291 72.5
AL3G28110 Arabidopsis lyrata HOM05D004279 ORTHO05D004979 1.9e-111 406.4 289 73.7
A05p33880 Brassica napus HOM05D004279 ORTHO05D004979 1.9e-111 406.4 289 73.0
Potri.011G128300 Populus trichocarpa HOM05D004279 ORTHO05D004979 1.9e-111 406.4 291 70.8
Aa31LG8G2770 Aethionema arabicum HOM05D004279 ORTHO05D004979 2.5e-111 406.0 289 74.0
BcaB06g29588 Brassica carinata HOM05D004279 ORTHO05D004979 2.5e-111 406.0 290 72.4
Oeu055672.1 Olea europaea HOM05D004279 ORTHO05D004979 2.5e-111 406.0 299 68.6
CSS0022309 Camellia sinensis var. sinensis HOM05D004279 ORTHO05D004979 3.2e-111 405.6 294 73.1
Ciclev10009067m.g Citrus clementina HOM05D004279 ORTHO05D004979 3.2e-111 405.6 283 72.1
Gohir.D05G360400 Gossypium hirsutum HOM05D004279 ORTHO05D004979 3.2e-111 405.6 289 71.6
Lj3g0025503 Lotus japonicus HOM05D004279 ORTHO05D004979 3.2e-111 405.6 284 72.5
Sp6g16410 Schrenkiella parvula HOM05D004279 ORTHO05D004979 4.2e-111 405.2 290 73.1
BcaB04g20920 Brassica carinata HOM05D004279 ORTHO05D004979 5.5e-111 404.8 289 73.4
CsaV3_3G044480 Cucumis sativus L. HOM05D004279 ORTHO05D004979 5.5e-111 404.8 287 72.1
Sp3g13790 Schrenkiella parvula HOM05D004279 ORTHO05D004979 5.5e-111 404.8 289 73.0
BcaB05g22132 Brassica carinata HOM05D004279 ORTHO05D004979 7.2e-111 404.4 292 72.6
Medtr2g080130 Medicago truncatula HOM05D004279 ORTHO05D004979 7.2e-111 404.4 288 73.3
AT5G54400 Arabidopsis thaliana HOM05D004279 ORTHO05D004979 9.4e-111 404.1 291 72.9
ClCG11G018340 Citrullus lanatus HOM05D004279 ORTHO05D004979 9.4e-111 404.1 282 73.4
BcaC05g28964 Brassica carinata HOM05D004279 ORTHO05D004979 1.2e-110 403.7 289 72.3
C05p51590 Brassica napus HOM05D004279 ORTHO05D004979 1.2e-110 403.7 289 72.3
BolC5t33846H Brassica oleracea HOM05D004279 ORTHO05D004979 1.2e-110 403.7 289 72.3
AL8G29740 Arabidopsis lyrata HOM05D004279 ORTHO05D004979 1.6e-110 403.3 291 72.2
BraA05t22210Z Brassica rapa HOM05D004279 ORTHO05D004979 1.6e-110 403.3 289 72.7
A02p10310 Brassica napus HOM05D004279 ORTHO05D004979 2.1e-110 402.9 292 71.9
MELO3C018223.2 Cucumis melo HOM05D004279 ORTHO05D004979 2.1e-110 402.9 283 72.8
Gohir.A04G027700 Gossypium hirsutum HOM05D004279 ORTHO05D004979 2.7e-110 402.5 289 70.9
BolC2t07801H Brassica oleracea HOM05D004279 ORTHO05D004979 3.6e-110 402.1 292 71.6
BraA02t06098Z Brassica rapa HOM05D004279 ORTHO05D004979 3.6e-110 402.1 292 71.6
Oeu008023.1 Olea europaea HOM05D004279 ORTHO05D004979 6.1e-110 401.4 299 68.6
Prupe.4G187700 Prunus persica HOM05D004279 ORTHO05D004979 7.9e-110 401.0 284 72.2
Carub.0008s1473 Capsella rubella HOM05D004279 ORTHO05D004979 1.0e-109 400.6 291 71.8
MD03G1221800 Malus domestica HOM05D004279 ORTHO05D004979 1.4e-109 400.2 294 70.1
Phvul.005G085300 Phaseolus vulgaris HOM05D004279 ORTHO05D004979 1.4e-109 400.2 292 71.6
VMungo1080G0833 Vigna mungo HOM05D004279 ORTHO05D004979 1.4e-109 400.2 292 71.6
C02p17040 Brassica napus HOM05D004279 ORTHO05D004979 2.3e-109 399.4 292 71.2
Glyma.12G220600 Glycine max HOM05D004279 ORTHO05D004979 3.0e-109 399.1 293 71.3
SalBow7G1458 Salvia bowleyana HOM05D004279 ORTHO05D004979 3.9e-109 398.7 290 72.1
THA.LOC104810491 Tarenaya hassleriana HOM05D004279 ORTHO05D004979 3.9e-109 398.7 290 72.4
BraA01t03905Z Brassica rapa HOM05D004279 ORTHO05D004979 8.8e-109 397.5 283 73.9
Sed0000911 Sechium edule HOM05D004279 ORTHO05D004979 8.8e-109 397.5 287 71.1
Eucgr.F01088 Eucalyptus grandis HOM05D004279 ORTHO05D004979 1.5e-108 396.7 290 70.7
Sc16g0006820 Simmondsia chinensis HOM05D004279 ORTHO05D004979 2.6e-108 396.0 298 68.8
A01p38550 Brassica napus HOM05D004279 ORTHO05D004979 3.3e-108 395.6 283 73.5
FAN16G2997 Fragaria x ananassa HOM05D004279 ORTHO05D004979 4.4e-108 395.2 288 71.2
FvH4_3g20760 Fragaria vesca HOM05D004279 ORTHO05D004979 5.7e-108 394.8 288 71.2
FAN11G1457 Fragaria x ananassa HOM05D004279 ORTHO05D004979 5.7e-108 394.8 288 71.2
RcHm_v2.0_Chr5g0034991 Rosa chinensis HOM05D004279 ORTHO05D004979 5.7e-108 394.8 288 71.2
Aa31LG3G10340 Aethionema arabicum HOM05D004279 ORTHO05D004979 1.3e-107 393.7 292 70.5
MD11G1239200 Malus domestica HOM05D004279 ORTHO05D004979 1.3e-107 393.7 284 70.4
FAN21G3274 Fragaria x ananassa HOM05D004279 ORTHO05D004979 1.7e-107 393.3 288 70.8
C01p48920 Brassica napus HOM05D004279 ORTHO05D004979 2.2e-107 392.9 283 73.1
Sed0021920 Sechium edule HOM05D004279 ORTHO05D004979 3.7e-107 392.1 282 72.3
Eucgr.F03342 Eucalyptus grandis HOM05D004279 ORTHO05D004979 1.1e-106 390.6 283 67.8
FAN25G2565 Fragaria x ananassa HOM05D004279 ORTHO05D004979 1.8e-106 389.8 288 70.5
BcaC03g14314 Brassica carinata HOM05D004279 ORTHO05D004979 4.5e-105 385.2 280 71.1
Lsat_1_v5_gn_7_105700 Lactuca sativa HOM05D004279 ORTHO05D004979 7.7e-105 384.4 296 69.3
THA.LOC104799915 Tarenaya hassleriana HOM05D004279 ORTHO05D004979 5.0e-104 381.7 288 70.8
SGA_v2.0_scaffold9G04950 Striga asiatica HOM05D004279 ORTHO05D004979 6.5e-104 381.3 298 68.1
Lalb_Chr25g0286631 Lupinus albus HOM05D004279 ORTHO05D004979 3.2e-103 379.0 286 71.0
THA.LOC104818054 Tarenaya hassleriana HOM05D004279 ORTHO05D004979 7.2e-103 377.9 291 69.1
Lalb_Chr01g0016991 Lupinus albus HOM05D004279 ORTHO05D004979 2.7e-102 375.9 285 69.5
unitig_0.g2258 Utricularia gibba HOM05D004279 ORTHO05D004979 2.7e-102 375.9 298 64.1
MBI02_g29384_MAGBIO Magnolia biondii HOM05D004279 ORTHO05D004979 3.6e-102 375.6 291 68.0
Glyma.12G148500 Glycine max HOM05D004279 ORTHO05D004979 5.7e-100 368.2 295 66.1
Ah.06g183670 Amaranthus hybridus HOM05D004279 ORTHO05D004979 7.5e-100 367.9 307 64.2
SHI28037 Sapria himalayana HOM05D004279 ORTHO05D004979 1.3e-99 367.1 282 66.0
Phvul.011G148200 Phaseolus vulgaris HOM05D004279 ORTHO05D004979 3.7e-99 365.5 295 66.1
Glyma.06G249400 Glycine max HOM05D004279 ORTHO05D004979 6.3e-99 364.8 296 64.9
VMungo1127G1925 Vigna mungo HOM05D004279 ORTHO05D004979 2.4e-98 362.8 295 64.7
SGA_v2.0_scaffold73G24305 Striga asiatica HOM05D004279 ORTHO05D004979 2.0e-97 359.8 293 63.5
AUR62015623 Chenopodium quinoa HOM05D004279 ORTHO05D004979 6.5e-96 354.8 306 63.1
AUR62029338 Chenopodium quinoa HOM05D004279 ORTHO05D004979 1.1e-95 354.0 306 63.4
ECA246G0789 Erigeron canadensis HOM05D004279 ORTHO05D004979 7.2e-95 351.3 244 73.8
EL10Ac4g08091 Beta vulgaris HOM05D004279 ORTHO05D004979 2.7e-94 349.4 310 61.0
SHI18877 Sapria himalayana HOM05D004279 ORTHO05D004979 1.5e-87 327.0 261 64.8
Glyma.13G280900 Glycine max HOM05D004279 ORTHO05D004979 3.6e-86 322.4 293 61.4
HPP92_016704 Vanilla planifolia HOM05D004279 ORTHO05D004979 3.4e-84 315.8 296 61.1
GSVIVG01014410001 Vitis vinifera HOM05D004279 ORTHO05D004979 2.3e-80 303.1 191 79.6
SHI27994 Sapria himalayana HOM05D004279 ORTHO05D004979 1.0e-77 294.3 279 56.6
Thhalv10014468m.g Eutrema salsugineum HOM05D004279 ORTHO05D004979 3.2e-74 282.7 214 72.0
SHI27902 Sapria himalayana HOM05D004279 ORTHO05D004979 1.8e-69 266.9 278 53.2
SHI27891 Sapria himalayana HOM05D004279 ORTHO05D004979 2.2e-67 260.0 266 53.4
ATR0693G409 Amborella trichopoda HOM05D004279 ORTHO05D004979 8.9e-61 238.0 276 50.4
Mapoly0019s0089 Marchantia polymorpha HOM05D004279 ORTHO05D004979 8.9e-61 238.0 275 47.3
HanXRQChr08g0235651 Helianthus annuus HOM05D004279 ORTHO05D004979 1.4e-58 230.7 163 71.2
SHI28023 Sapria himalayana HOM05D004279 ORTHO05D004979 6.0e-57 225.3 266 50.4
Atru.chr2.2812 Acer truncatum HOM05D004279 ORTHO05D004979 1.0e-56 224.6 136 79.4
HanXRQChr08g0235661 Helianthus annuus HOM05D004279 ORTHO05D004979 1.5e-52 210.7 131 77.9
CAN.G162.92 Capsicum annuum HOM05D004279 ORTHO05D004979 7.6e-44 181.8 142 68.3
VMungo1127G2040 Vigna mungo HOM05D004279 ORTHO05D004979 5.4e-42 175.6 152 60.5
Haze_01531 Corylus avellana HOM05D004279 ORTHO05D004979 4.2e-26 122.9 114 59.6
CBR_g24389 Chara braunii HOM05D004279 ORTHO05D004979 5.1e-24 115.9 334 30.2
Haze_12044 Corylus avellana HOM05D004279 ORTHO05D004979 1.1e-23 114.8 112 58.0
Atru.chr2.2813 Acer truncatum HOM05D004279 ORTHO05D004979 3.3e-23 113.2 98 57.1
QL06p019554 Quercus lobata HOM05D004279 ORTHO05D004979 4.8e-22 109.4 80 68.8
Haze_10444 Corylus avellana HOM05D004279 ORTHO05D004979 2.4e-21 107.1 98 61.2
SHI28022 Sapria himalayana HOM05D004279 ORTHO05D004979 2.8e-14 83.6 71 59.2
Haze_13283 Corylus avellana HOM05D004279 ORTHO05D004979 1.7e-11 74.3 90 52.2
Haze_06332 Corylus avellana HOM05D004279 ORTHO05D004979 3.8e-11 73.2 72 56.9
SHI26932 Sapria himalayana HOM05D009124 ORTHO05D012381 3.9e-08 63.2 68 50.0


User provided reference genes

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