Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_009944 Daucus carota HOM05D004169 ORTHO05D004942 1.1e-89 333.2 159 100.0
DCAR_009941 Daucus carota HOM05D004169 ORTHO05D004942 2.0e-78 295.8 141 100.0
Oeu030387.1 Olea europaea HOM05D004169 ORTHO05D004942 2.8e-69 265.4 141 85.8
Oeu030389.1 Olea europaea HOM05D004169 ORTHO05D004942 2.8e-69 265.4 141 85.8
Lj4C791T8 Lonicera japonica HOM05D004169 ORTHO05D004942 8.3e-69 263.8 141 83.7
DCAR_013851 Daucus carota HOM05D004169 ORTHO05D004942 2.0e-67 259.2 141 84.4
MSTRG.1220 Avicennia marina HOM05D004169 ORTHO05D004942 2.7e-67 258.8 141 82.3
SalBow7G3670 Salvia bowleyana HOM05D004169 ORTHO05D004942 4.5e-67 258.1 141 81.6
Cc10_g02050 Coffea canephora HOM05D004169 ORTHO05D004942 2.9e-66 255.4 141 80.9
Duzib093G0775 Durio zibethinus HOM05D004169 ORTHO05D004942 5.0e-66 254.6 141 80.1
Oeu047750.1 Olea europaea HOM05D004169 ORTHO05D004942 5.0e-66 254.6 141 80.1
HanXRQChr05g0156291 Helianthus annuus HOM05D004169 ORTHO05D004942 6.5e-66 254.2 141 80.1
SGA_v2.0_scaffold17G08098 Striga asiatica HOM05D004169 ORTHO05D004942 6.5e-66 254.2 141 80.9
HPP92_014629 Vanilla planifolia HOM05D004169 ORTHO05D004942 6.5e-66 254.2 141 80.9
HanXRQChr09g0269701 Helianthus annuus HOM05D004169 ORTHO05D004942 8.5e-66 253.8 141 78.0
ECA246G0823 Erigeron canadensis HOM05D004169 ORTHO05D004942 1.5e-65 253.1 141 80.1
Os09g0520200 Oryza sativa ssp. japonica HOM05D004169 ORTHO05D004942 1.5e-65 253.1 141 80.1
CANSAT35G1895 Cannabis sativa HOM05D004169 ORTHO05D004942 1.9e-65 252.7 141 80.9
CARHR231560 Cardamine hirsuta HOM05D004169 ORTHO05D004942 1.9e-65 252.7 141 80.1
Hma1.2p1_1386F.1_g279800 Hydrangea macrophylla HOM05D004169 ORTHO05D004942 1.9e-65 252.7 141 80.1
A01p15480 Brassica napus HOM05D004169 ORTHO05D004942 3.2e-65 251.9 141 80.1
BraA01t01487Z Brassica rapa HOM05D004169 ORTHO05D004942 3.2e-65 251.9 141 80.1
THA.LOC104806900 Tarenaya hassleriana HOM05D004169 ORTHO05D004942 3.2e-65 251.9 141 80.1
CAN.G541.46 Capsicum annuum HOM05D004169 ORTHO05D004942 4.2e-65 251.5 141 81.6
Migut.C00795 Erythranthe guttata HOM05D004169 ORTHO05D004942 4.2e-65 251.5 141 79.4
Atru.chr13.351 Acer truncatum HOM05D004169 ORTHO05D004942 5.5e-65 251.1 141 80.1
Dinv31815 Davidia involucrata HOM05D004169 ORTHO05D004942 5.5e-65 251.1 141 80.1
Thhalv10025308m.g Eutrema salsugineum HOM05D004169 ORTHO05D004942 5.5e-65 251.1 141 79.4
Sp7g22120 Schrenkiella parvula HOM05D004169 ORTHO05D004942 5.5e-65 251.1 141 79.4
BcaC09g50903 Brassica carinata HOM05D004169 ORTHO05D004942 7.2e-65 250.8 141 80.1
BcaNung06401 Brassica carinata HOM05D004169 ORTHO05D004942 7.2e-65 250.8 141 78.7
A03p55080 Brassica napus HOM05D004169 ORTHO05D004942 7.2e-65 250.8 141 78.7
C01p19380 Brassica napus HOM05D004169 ORTHO05D004942 7.2e-65 250.8 141 80.1
C07p53400 Brassica napus HOM05D004169 ORTHO05D004942 7.2e-65 250.8 141 78.7
BolC1t01866H Brassica oleracea HOM05D004169 ORTHO05D004942 7.2e-65 250.8 141 80.1
BolC7t45834H Brassica oleracea HOM05D004169 ORTHO05D004942 7.2e-65 250.8 141 78.7
BraA03t14568Z Brassica rapa HOM05D004169 ORTHO05D004942 7.2e-65 250.8 141 78.7
PGR083G1299 Punica granatum HOM05D004169 ORTHO05D004942 7.2e-65 250.8 141 80.9
Migut.N03135 Erythranthe guttata HOM05D004169 ORTHO05D004942 9.4e-65 250.4 141 79.4
Lsat_1_v5_gn_5_26101 Lactuca sativa HOM05D004169 ORTHO05D004942 9.4e-65 250.4 141 76.6
Sabra02G0021500 Salix brachista HOM05D004169 ORTHO05D004942 9.4e-65 250.4 141 80.9
AL7G29130 Arabidopsis lyrata HOM05D004169 ORTHO05D004942 1.2e-64 250.0 141 79.4
Sopen07g015700 Solanum pennellii HOM05D004169 ORTHO05D004942 1.2e-64 250.0 141 80.1
TAR628G0735 Trochodendron aralioides HOM05D004169 ORTHO05D004942 1.2e-64 250.0 141 80.1
AT4G24160 Arabidopsis thaliana HOM05D004169 ORTHO05D004942 1.6e-64 249.6 141 78.7
Carub.0007s1694 Capsella rubella HOM05D004169 ORTHO05D004942 1.6e-64 249.6 141 78.7
Lalb_Chr08g0246061 Lupinus albus HOM05D004169 ORTHO05D004942 2.1e-64 249.2 141 78.0
Manes.18G017100 Manihot esculenta HOM05D004169 ORTHO05D004942 2.1e-64 249.2 141 80.1
Actinidia22490 Actinidia chinensis HOM05D004169 ORTHO05D004942 2.7e-64 248.8 141 80.9
Actinidia22492 Actinidia chinensis HOM05D004169 ORTHO05D004942 2.7e-64 248.8 141 80.9
ECA232G2227 Erigeron canadensis HOM05D004169 ORTHO05D004942 2.7e-64 248.8 141 78.7
QL02p010782 Quercus lobata HOM05D004169 ORTHO05D004942 2.7e-64 248.8 141 79.4
Cpa.g.sc140.24 Carica papaya HOM05D004169 ORTHO05D004942 3.6e-64 248.4 141 78.7
Sabra05G0181500 Salix brachista HOM05D004169 ORTHO05D004942 3.6e-64 248.4 141 79.4
Zm00001eb102970 Zea mays HOM05D004169 ORTHO05D004942 3.6e-64 248.4 141 80.9
Glyma.04G026500 Glycine max HOM05D004169 ORTHO05D004942 4.7e-64 248.1 141 77.3
Nitab4.5_0000352g0020 Nicotiana tabacum HOM05D004169 ORTHO05D004942 4.7e-64 248.1 141 77.3
Peaxi162Scf00186g00012 Petunia axillaris HOM05D004169 ORTHO05D004942 6.1e-64 247.7 141 76.6
Hma1.2p1_0773F.1_g216220 Hydrangea macrophylla HOM05D004169 ORTHO05D004942 8.0e-64 247.3 141 77.3
MBI05_g16274_MAGBIO Magnolia biondii HOM05D004169 ORTHO05D004942 8.0e-64 247.3 141 79.4
PSO675G0784 Papaver somniferum HOM05D004169 ORTHO05D004942 8.0e-64 247.3 141 77.3
VMungo1309G1829 Vigna mungo HOM05D004169 ORTHO05D004942 8.0e-64 247.3 141 76.6
Atru.chr13.350 Acer truncatum HOM05D004169 ORTHO05D004942 1.0e-63 246.9 141 78.7
Potri.005G235200 Populus trichocarpa HOM05D004169 ORTHO05D004942 1.0e-63 246.9 141 78.7
Sc26g0003230 Simmondsia chinensis HOM05D004169 ORTHO05D004942 1.0e-63 246.9 141 79.4
unitig_37.g13009 Utricularia gibba HOM05D004169 ORTHO05D004942 1.0e-63 246.9 141 78.0
CSS0042982 Camellia sinensis var. sinensis HOM05D004169 ORTHO05D004942 1.4e-63 246.5 141 75.9
CSS0046054 Camellia sinensis var. sinensis HOM05D004169 ORTHO05D004942 1.4e-63 246.5 141 75.9
Nn5g29242 Nelumbo nucifera HOM05D004169 ORTHO05D004942 1.4e-63 246.5 141 76.6
Sed0010010 Sechium edule HOM05D004169 ORTHO05D004942 1.4e-63 246.5 141 78.0
GSVIVG01009830001 Vitis vinifera HOM05D004169 ORTHO05D004942 1.4e-63 246.5 141 78.7
Eucgr.F01623 Eucalyptus grandis HOM05D004169 ORTHO05D004942 1.8e-63 246.1 141 78.0
Gohir.A05G188120 Gossypium hirsutum HOM05D004169 ORTHO05D004942 1.8e-63 246.1 141 78.7
Gohir.D05G191200 Gossypium hirsutum HOM05D004169 ORTHO05D004942 1.8e-63 246.1 141 78.7
Gorai.009G196500 Gossypium raimondii HOM05D004169 ORTHO05D004942 1.8e-63 246.1 141 78.7
PSO541G3059 Papaver somniferum HOM05D004169 ORTHO05D004942 1.8e-63 246.1 141 76.6
Potri.002G027300 Populus trichocarpa HOM05D004169 ORTHO05D004942 1.8e-63 246.1 141 79.4
Aqoxy6G02346 Aquilegia oxysepala HOM05D004169 ORTHO05D004942 2.3e-63 245.7 142 81.0
Ca_02057_v3 Cicer arietinum L. HOM05D004169 ORTHO05D004942 2.3e-63 245.7 141 76.6
RcHm_v2.0_Chr6g0302201 Rosa chinensis HOM05D004169 ORTHO05D004942 2.3e-63 245.7 141 79.4
EL10Ac1g00441 Beta vulgaris HOM05D004169 ORTHO05D004942 3.0e-63 245.4 141 78.0
FAN15G3243 Fragaria x ananassa HOM05D004169 ORTHO05D004942 3.0e-63 245.4 141 78.7
Sc15g0002560 Simmondsia chinensis HOM05D004169 ORTHO05D004942 3.0e-63 245.4 141 79.4
Thecc.08G038200 Theobroma cacao HOM05D004169 ORTHO05D004942 3.0e-63 245.4 141 76.6
ATR0149G003 Amborella trichopoda HOM05D004169 ORTHO05D004942 4.0e-63 245.0 142 78.9
MSTRG.24262 Avicennia marina HOM05D004169 ORTHO05D004942 5.2e-63 244.6 141 80.1
FvH4_2g39100 Fragaria vesca HOM05D004169 ORTHO05D004942 5.2e-63 244.6 141 79.4
Rhsim06G0026100 Rhododendron simsii HOM05D004169 ORTHO05D004942 5.2e-63 244.6 141 76.6
CiPaw.07G153600 Carya illinoinensis HOM05D004169 ORTHO05D004942 6.8e-63 244.2 141 80.1
CsaV3_2G029300 Cucumis sativus L. HOM05D004169 ORTHO05D004942 6.8e-63 244.2 141 76.6
Duzib116G0263 Durio zibethinus HOM05D004169 ORTHO05D004942 6.8e-63 244.2 141 77.3
Dinv39491 Davidia involucrata HOM05D004169 ORTHO05D004942 8.8e-63 243.8 141 77.3
Medtr3g113160 Medicago truncatula HOM05D004169 ORTHO05D004942 8.8e-63 243.8 141 75.2
TPR.G30291 Trifolium pratense HOM05D004169 ORTHO05D004942 8.8e-63 243.8 141 75.2
unitig_8.g3381 Utricularia gibba HOM05D004169 ORTHO05D004942 8.8e-63 243.8 141 77.3
MELO3C010990.2 Cucumis melo HOM05D004169 ORTHO05D004942 1.2e-62 243.4 141 76.6
Phvul.009G014600 Phaseolus vulgaris HOM05D004169 ORTHO05D004942 1.2e-62 243.4 141 74.5
Psat5g014480 Pisum sativum HOM05D004169 ORTHO05D004942 1.2e-62 243.4 141 75.2
vmacro21702 Vaccinium macrocarpon HOM05D004169 ORTHO05D004942 1.2e-62 243.4 141 75.2
Ciclev10001334m.g Citrus clementina HOM05D004169 ORTHO05D004942 1.5e-62 243.0 141 78.0
Actinidia37978 Actinidia chinensis HOM05D004169 ORTHO05D004942 2.0e-62 242.7 141 77.3
AUR62014419 Chenopodium quinoa HOM05D004169 ORTHO05D004942 2.0e-62 242.7 141 78.0
MD08G1017500 Malus domestica HOM05D004169 ORTHO05D004942 2.0e-62 242.7 141 75.9
Prupe.1G370200 Prunus persica HOM05D004169 ORTHO05D004942 2.0e-62 242.7 141 75.9
THA.LOC104804855 Tarenaya hassleriana HOM05D004169 ORTHO05D004942 2.6e-62 242.3 141 78.7
Lj1g0021833 Lotus japonicus HOM05D004169 ORTHO05D004942 3.4e-62 241.9 141 75.9
Actinidia15392 Actinidia chinensis HOM05D004169 ORTHO05D004942 4.4e-62 241.5 141 78.7
ClCG08G014480 Citrullus lanatus HOM05D004169 ORTHO05D004942 4.4e-62 241.5 141 75.9
Lsat_1_v5_gn_4_116000 Lactuca sativa HOM05D004169 ORTHO05D004942 4.4e-62 241.5 141 74.5
Hund17227 Selenicereus undatus HOM05D004169 ORTHO05D004942 7.5e-62 240.7 141 75.9
Hund26864 Selenicereus undatus HOM05D004169 ORTHO05D004942 7.5e-62 240.7 141 76.6
Ah.05g171900 Amaranthus hybridus HOM05D004169 ORTHO05D004942 1.3e-61 240.0 141 77.3
Ca_13394_v3 Cicer arietinum L. HOM05D004169 ORTHO05D004942 2.2e-61 239.2 141 77.3
TAR376G0386 Trochodendron aralioides HOM05D004169 ORTHO05D004942 2.2e-61 239.2 141 76.6
arahy.Tifrunner.gnm1.ann1.3VK2QG Arachis hypogaea HOM05D004169 ORTHO05D004942 6.3e-61 237.7 141 73.8
arahy.Tifrunner.gnm1.ann1.CMA0H9 Arachis hypogaea HOM05D004169 ORTHO05D004942 6.3e-61 237.7 141 73.8
Medtr1g023340 Medicago truncatula HOM05D004169 ORTHO05D004942 8.3e-61 237.3 141 76.6
Psat6g005200 Pisum sativum HOM05D004169 ORTHO05D004942 1.4e-60 236.5 141 75.2
Cfa013911 Carpinus fangiana HOM05D004169 ORTHO05D004942 1.8e-60 236.1 141 75.9
Haze_22591 Corylus avellana HOM05D004169 ORTHO05D004942 2.4e-60 235.7 141 76.6
TWI12G0121 Tripterygium wilfordii HOM05D004169 ORTHO05D004942 2.4e-60 235.7 141 75.2
AUR62019155 Chenopodium quinoa HOM05D004169 ORTHO05D004942 3.1e-60 235.3 145 75.2
Sed0000348 Sechium edule HOM05D004169 ORTHO05D004942 3.1e-60 235.3 142 73.9
TWI56G0721 Tripterygium wilfordii HOM05D004169 ORTHO05D004942 3.1e-60 235.3 141 74.5
Glyma.14G216800 Glycine max HOM05D004169 ORTHO05D004942 5.4e-60 234.6 141 76.6
Lj5g0006972 Lotus japonicus HOM05D004169 ORTHO05D004942 1.2e-59 233.4 141 75.2
VMungo0647G1986 Vigna mungo HOM05D004169 ORTHO05D004942 1.6e-59 233.0 141 75.9
arahy.Tifrunner.gnm1.ann1.SD0DCP Arachis hypogaea HOM05D004169 ORTHO05D004942 2.0e-59 232.6 141 75.9
arahy.Tifrunner.gnm1.ann1.T5GNGC Arachis hypogaea HOM05D004169 ORTHO05D004942 2.0e-59 232.6 141 75.9
Phvul.001G009400 Phaseolus vulgaris HOM05D004169 ORTHO05D004942 2.0e-59 232.6 141 75.9
Aa31sc185G60 Aethionema arabicum HOM05D004169 ORTHO05D004942 4.5e-59 231.5 141 75.2
MD15G1016400 Malus domestica HOM05D004169 ORTHO05D004942 4.5e-59 231.5 141 72.3
Nitab4.5_0004368g0020 Nicotiana tabacum HOM05D004169 ORTHO05D004942 4.5e-59 231.5 129 80.6
Glyma.17G255400 Glycine max HOM05D004169 ORTHO05D004942 5.9e-59 231.1 141 74.5
Lalb_Chr22g0354451 Lupinus albus HOM05D004169 ORTHO05D004942 1.7e-58 229.6 141 73.8
TPR.G34338 Trifolium pratense HOM05D004169 ORTHO05D004942 6.6e-58 227.6 141 72.3
SMO266G0010 Selaginella moellendorffii HOM05D004169 ORTHO05D004942 1.1e-57 226.9 143 72.7
AagrBONN_evm.TU.Sc2ySwM_362.1142 Anthoceros agrestis HOM05D004169 ORTHO05D004942 7.2e-57 224.2 143 69.9
SGA_v2.0_scaffold92G28285 Striga asiatica HOM05D004169 ORTHO05D004942 7.2e-57 224.2 129 79.1
Mapoly0037s0009 Marchantia polymorpha HOM05D004169 ORTHO05D004942 6.1e-56 221.1 143 69.9
Pp3c9_570 Physcomitrium patens HOM05D004169 ORTHO05D004942 1.3e-53 213.4 141 67.4
vmacro04328 Vaccinium macrocarpon HOM05D004169 ORTHO05D004942 2.2e-53 212.6 206 51.9
FAN20G1955 Fragaria x ananassa HOM05D004169 ORTHO05D004942 7.3e-49 197.6 158 62.7
MD00G1162000 Malus domestica HOM05D004169 ORTHO05D004942 2.1e-48 196.1 135 69.6
CBR_g53937 Chara braunii HOM05D004169 ORTHO05D004942 5.4e-44 181.4 142 57.7
BcaNung01121 Brassica carinata HOM05D004169 ORTHO05D004942 2.0e-38 162.9 94 75.5
Rhsim07G0244700 Rhododendron simsii HOM05D004169 ORTHO05D004942 4.6e-35 151.8 94 69.1
Gohir.D05G259151 Gossypium hirsutum HOM05D004169 ORTHO05D004942 1.3e-34 150.2 110 61.8
Glyma.06G026500 Glycine max HOM05D004169 ORTHO05D004942 3.0e-34 149.1 97 67.0
Lsat_1_v5_gn_9_64701 Lactuca sativa HOM05D004169 ORTHO05D004942 3.3e-33 145.6 91 67.0
Gorai.009G270900 Gossypium raimondii HOM05D004169 ORTHO05D004942 7.3e-33 144.4 108 60.2
Cre01.g000300 Chlamydomonas reinhardtii HOM05D004169 ORTHO05D004942 2.4e-28 129.4 146 43.8
Haze_22590 Corylus avellana HOM05D004169 ORTHO05D002838 5.4e-28 128.3 71 80.3
Solyc07g032170.3 Solanum lycopersicum HOM05D004169 ORTHO05D004942 5.1e-26 121.7 61 88.5
Cfa027320 Carpinus fangiana HOM05D004169 ORTHO05D004942 1.1e-23 114.0 114 50.9
SEGI_38743 Sequoiadendron giganteum HOM05D004169 ORTHO05D004942 6.6e-18 94.7 62 59.7
CARHR269140 Cardamine hirsuta HOM05D004169 ORTHO05D004942 1.9e-17 93.2 55 67.3
PRCOL_00002006 Prasinoderma coloniale HOM05D004169 ORTHO05D004942 2.2e-13 79.7 147 34.0
MCO08G266 Micromonas commoda HOM05D004169 ORTHO05D004942 1.9e-12 76.6 163 30.1
COL.COLO4_26191 Corchorus olitorius HOM05D004169 ORTHO05D004942 8.7e-10 67.8 90 42.2
TWI31G1084 Tripterygium wilfordii HOM05D000579 ORTHO05D000741 1.4e-07 60.5 118 34.7
Pp3s30_380 Physcomitrium patens HOM05D000068 ORTHO05D020444 1.8e-07 60.1 114 35.1
Pp3s30_381 Physcomitrium patens HOM05D000068 ORTHO05D020444 1.8e-07 60.1 114 35.1
BcaNung00725 Brassica carinata HOM05D000916 ORTHO05D008340 5.3e-07 58.5 162 27.8
THA.LOC104807463 Tarenaya hassleriana HOM05D000916 ORTHO05D008340 9.0e-07 57.8 159 27.0
SEGI_29088 Sequoiadendron giganteum HOM05D004169 ORTHO05D004942 1.2e-06 57.4 32 81.2
TWI31G0166 Tripterygium wilfordii HOM05D000579 ORTHO05D000741 1.2e-06 57.4 118 33.9
BolC1t00243H Brassica oleracea HOM05D000916 ORTHO05D008340 1.5e-06 57.0 163 26.4
BcaNung00724 Brassica carinata HOM05D000916 ORTHO05D008340 2.0e-06 56.6 163 26.4
A01p02340 Brassica napus HOM05D000916 ORTHO05D008340 2.0e-06 56.6 163 26.4
C01p02550 Brassica napus HOM05D000916 ORTHO05D008340 2.0e-06 56.6 163 26.4
BraA01t00222Z Brassica rapa HOM05D000916 ORTHO05D008340 2.0e-06 56.6 162 26.5
Thhalv10025472m.g Eutrema salsugineum HOM05D000916 ORTHO05D008340 2.0e-06 56.6 159 27.0
SHI08091 Sapria himalayana HOM05D004169 ORTHO05D004942 2.0e-06 56.6 85 44.7
Solyc07g032180.3 Solanum lycopersicum HOM05D004169 ORTHO05D004942 2.0e-06 56.6 31 71.0
AT4G36530 Arabidopsis thaliana HOM05D000916 ORTHO05D008340 2.6e-06 56.2 159 27.0
CARHR244840 Cardamine hirsuta HOM05D000916 ORTHO05D008340 3.4e-06 55.8 159 27.0
Lsat_1_v5_gn_3_21400 Lactuca sativa HOM05D004169 ORTHO05D004942 4.5e-06 55.5 44 56.8
Sp7g34180 Schrenkiella parvula HOM05D000916 ORTHO05D008340 5.8e-06 55.1 159 26.4
Carub.0007s0380 Capsella rubella HOM05D000916 ORTHO05D008340 9.9e-06 54.3 159 25.8


User provided reference genes

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