Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_009869 Daucus carota HOM05D001896 ORTHO05D001862 3.5e-101 371.7 198 100.0
DCAR_020055 Daucus carota HOM05D001896 ORTHO05D001862 1.3e-63 246.9 199 70.9
DCAR_009870 Daucus carota HOM05D001896 ORTHO05D001862 4.1e-33 145.6 199 50.8
DCAR_012821 Daucus carota HOM05D001896 ORTHO05D001862 1.0e-31 141.0 194 50.0
DCAR_008863 Daucus carota HOM05D001896 ORTHO05D001862 3.1e-25 119.4 197 45.7
AUR62037407 Chenopodium quinoa HOM05D001896 ORTHO05D001862 5.9e-16 88.6 203 37.4
Sed0003560 Sechium edule HOM05D001896 ORTHO05D001862 1.0e-15 87.8 187 39.0
FAN20G2517 Fragaria x ananassa HOM05D001896 ORTHO05D001862 6.5e-15 85.1 184 38.6
FAN24G0761 Fragaria x ananassa HOM05D000371 ORTHO05D001484 6.5e-15 85.1 182 39.6
RcHm_v2.0_Chr6g0309871 Rosa chinensis HOM05D001896 ORTHO05D001862 6.5e-15 85.1 182 39.6
FAN27G2593 Fragaria x ananassa HOM05D000371 ORTHO05D001484 1.9e-14 83.6 182 39.0
FvH4_2g32830 Fragaria vesca HOM05D001896 ORTHO05D001862 2.5e-14 83.2 182 39.0
Dinv44941 Davidia involucrata HOM05D001896 ORTHO05D001862 3.2e-14 82.8 184 37.5
MELO3C010793.2 Cucumis melo HOM05D001896 ORTHO05D001862 4.2e-14 82.4 188 37.2
Rhsim06G0063700 Rhododendron simsii HOM05D001896 ORTHO05D001862 7.2e-14 81.6 186 39.2
Cpa.g.sc142.51 Carica papaya HOM05D001896 ORTHO05D001862 1.6e-13 80.5 187 37.4
ClCG08G016610 Citrullus lanatus HOM05D001896 ORTHO05D001862 1.6e-13 80.5 188 37.2
Potri.014G014600 Populus trichocarpa HOM05D001896 ORTHO05D001862 1.6e-13 80.5 196 37.8
MD15G1299400 Malus domestica HOM05D001896 ORTHO05D001862 2.1e-13 80.1 186 36.6
CsaV3_2G026000 Cucumis sativus L. HOM05D001896 ORTHO05D001862 3.6e-13 79.3 188 37.2
MD02G1188200 Malus domestica HOM05D001896 ORTHO05D001862 3.6e-13 79.3 186 38.2
Manes.12G116200 Manihot esculenta HOM05D001896 ORTHO05D001862 3.6e-13 79.3 194 37.1
CiPaw.08G051100 Carya illinoinensis HOM05D001896 ORTHO05D001862 4.7e-13 79.0 186 38.2
EL10Ac1g02360 Beta vulgaris HOM05D001896 ORTHO05D001862 8.0e-13 78.2 200 32.0
Duzib116G0259 Durio zibethinus HOM05D001896 ORTHO05D001862 2.3e-12 76.6 190 37.9
Cpa.g.c26343.5 Carica papaya HOM05D001896 ORTHO05D001862 3.0e-12 76.3 194 34.5
Duzib093G0976 Durio zibethinus HOM05D001896 ORTHO05D001862 3.0e-12 76.3 187 36.4
Prupe.6G218500 Prunus persica HOM05D001896 ORTHO05D001862 3.0e-12 76.3 186 34.4
Carub.0002s0609 Capsella rubella HOM05D001896 ORTHO05D001862 5.2e-12 75.5 197 35.5
MD08G1080000 Malus domestica HOM05D001896 ORTHO05D001862 5.2e-12 75.5 195 36.4
CANSAT25G3829 Cannabis sativa HOM05D001896 ORTHO05D001862 6.8e-12 75.1 193 38.9
Lj4C73T24 Lonicera japonica HOM05D001896 ORTHO05D001862 6.8e-12 75.1 199 33.7
Prupe.1G420800 Prunus persica HOM05D001896 ORTHO05D001862 6.8e-12 75.1 184 36.4
Nn6g34510 Nelumbo nucifera HOM05D001896 ORTHO05D001862 8.8e-12 74.7 163 37.4
COL.COLO4_11600 Corchorus olitorius HOM05D001896 ORTHO05D001862 1.2e-11 74.3 185 35.1
Thecc.08G086000 Theobroma cacao HOM05D001896 ORTHO05D001862 1.2e-11 74.3 188 36.7
Atru.chr13.855 Acer truncatum HOM05D001896 ORTHO05D001862 1.5e-11 73.9 188 35.6
Gohir.A01G123300 Gossypium hirsutum HOM05D001896 ORTHO05D001862 1.5e-11 73.9 189 36.0
Dinv26948 Davidia involucrata HOM05D001896 ORTHO05D001862 2.0e-11 73.6 157 38.2
Oeu048568.1 Olea europaea HOM05D001896 ORTHO05D001862 2.6e-11 73.2 189 36.0
Thecc.01G074600 Theobroma cacao HOM05D001896 ORTHO05D001862 4.4e-11 72.4 190 33.2
RcHm_v2.0_Chr2g0108431 Rosa chinensis HOM05D001896 ORTHO05D001862 5.7e-11 72.0 161 37.9
AUR62034996 Chenopodium quinoa HOM05D001896 ORTHO05D001862 7.5e-11 71.6 188 35.1
Gohir.D01G110900 Gossypium hirsutum HOM05D001896 ORTHO05D001862 9.8e-11 71.2 189 34.9
Gorai.002G135700 Gossypium raimondii HOM05D001896 ORTHO05D001862 9.8e-11 71.2 189 34.9
GSVIVG01009317001 Vitis vinifera HOM05D001896 ORTHO05D001862 1.3e-10 70.9 187 32.6
Duzib147G1417 Durio zibethinus HOM05D001896 ORTHO05D001862 2.2e-10 70.1 182 31.9
Oeu013335.1 Olea europaea HOM05D001896 ORTHO05D001862 2.8e-10 69.7 179 36.3
Ah.15g097370 Amaranthus hybridus HOM05D001896 ORTHO05D001862 3.7e-10 69.3 197 32.0
QL12p038359 Quercus lobata HOM05D001896 ORTHO05D001862 3.7e-10 69.3 186 34.9
Cc10_g05130 Coffea canephora HOM05D001896 ORTHO05D001862 4.9e-10 68.9 199 34.7
Gohir.A05G211200 Gossypium hirsutum HOM05D001896 ORTHO05D001862 6.3e-10 68.6 190 36.8
Rhsim08G0092500 Rhododendron simsii HOM05D001896 ORTHO05D001862 6.3e-10 68.6 162 37.0
TAR628G1651 Trochodendron aralioides HOM05D001896 ORTHO05D001862 6.3e-10 68.6 188 31.9
Gohir.D05G214500 Gossypium hirsutum HOM05D001896 ORTHO05D001862 8.3e-10 68.2 162 37.0
Potri.014G014500 Populus trichocarpa HOM05D001896 ORTHO05D001862 1.1e-09 67.8 191 38.2
TAR381G1204 Trochodendron aralioides HOM05D001896 ORTHO05D001862 1.1e-09 67.8 162 37.0
Aa31LG2G10650 Aethionema arabicum HOM05D001896 ORTHO05D001862 1.4e-09 67.4 182 33.5
Cfa013755 Carpinus fangiana HOM05D001896 ORTHO05D001862 1.4e-09 67.4 180 34.4
AL1G20830 Arabidopsis lyrata HOM05D001896 ORTHO05D001862 1.8e-09 67.0 193 30.1
Duzib264G0605 Durio zibethinus HOM05D001896 ORTHO05D001862 1.8e-09 67.0 187 34.2
Glyma.04G046800 Glycine max HOM05D001896 ORTHO05D001862 1.8e-09 67.0 185 34.6
Gorai.009G221200 Gossypium raimondii HOM05D001896 ORTHO05D001862 2.4e-09 66.6 193 35.8
Lj1g0008502 Lotus japonicus HOM05D001896 ORTHO05D001862 3.1e-09 66.2 186 34.9
Manes.18G048000 Manihot esculenta HOM05D001896 ORTHO05D001862 3.1e-09 66.2 185 33.0
Migut.N02794 Erythranthe guttata HOM05D001896 ORTHO05D001862 4.1e-09 65.9 183 34.4
Atru.chr3.1040 Acer truncatum HOM05D001896 ORTHO05D001862 5.4e-09 65.5 187 33.7
AT1G10140 Arabidopsis thaliana HOM05D001896 ORTHO05D001862 5.4e-09 65.5 193 30.6
Phvul.009G073000 Phaseolus vulgaris HOM05D001896 ORTHO05D001862 7.0e-09 65.1 184 35.3
AL2G17800 Arabidopsis lyrata HOM05D001896 ORTHO05D001862 9.2e-09 64.7 197 32.5
AT1G58420 Arabidopsis thaliana HOM05D001896 ORTHO05D001862 9.2e-09 64.7 193 33.2
Lsat_1_v5_gn_1_1181 Lactuca sativa HOM05D001896 ORTHO05D001862 9.2e-09 64.7 191 35.6
Peaxi162Scf00160g00068 Petunia axillaris HOM05D001896 ORTHO05D001862 9.2e-09 64.7 200 32.0
PGR083G2885 Punica granatum HOM05D001896 ORTHO05D001862 9.2e-09 64.7 186 31.7
Solyc02g092190.1 Solanum lycopersicum HOM05D001896 ORTHO05D001862 9.2e-09 64.7 182 33.5
Sopen02g036760 Solanum pennellii HOM05D001896 ORTHO05D001862 9.2e-09 64.7 182 33.5
PGSC0003DMG400021411 Solanum tuberosum HOM05D001896 ORTHO05D001862 9.2e-09 64.7 182 32.4
ECA247G3779 Erigeron canadensis HOM05D001896 ORTHO05D001862 1.2e-08 64.3 195 36.4
Thhalv10023719m.g Eutrema salsugineum HOM05D001896 ORTHO05D001862 1.2e-08 64.3 197 31.5
Hma1.2p1_1170F.1_g263360 Hydrangea macrophylla HOM05D001896 ORTHO05D001862 1.2e-08 64.3 187 36.9
Manes.05G182700 Manihot esculenta HOM05D001896 ORTHO05D001862 1.2e-08 64.3 186 33.3
Sc15g0005450 Simmondsia chinensis HOM05D001896 ORTHO05D001862 1.2e-08 64.3 189 35.4
Sc15g0005480 Simmondsia chinensis HOM05D001896 ORTHO05D001862 1.2e-08 64.3 189 35.4
Duzib041G0206 Durio zibethinus HOM05D001896 ORTHO05D001862 1.6e-08 63.9 175 35.4
HanXRQChr10g0292131 Helianthus annuus HOM05D001896 ORTHO05D001862 1.6e-08 63.9 148 32.4
Medtr3g103290 Medicago truncatula HOM05D001896 ORTHO05D001862 1.6e-08 63.9 184 34.2
CSS0026617 Camellia sinensis var. sinensis HOM05D001896 ORTHO05D001862 2.0e-08 63.5 200 31.5
Gohir.A02G150400 Gossypium hirsutum HOM05D001896 ORTHO05D001862 2.0e-08 63.5 183 32.8
Lalb_Chr08g0245301 Lupinus albus HOM05D001896 ORTHO05D001862 2.0e-08 63.5 182 33.0
Nn5g30636 Nelumbo nucifera HOM05D001896 ORTHO05D001862 2.0e-08 63.5 161 37.3
Oeu053629.1 Olea europaea HOM05D001896 ORTHO05D001862 2.0e-08 63.5 192 31.8
CiPaw.01G002900 Carya illinoinensis HOM05D001896 ORTHO05D001862 2.7e-08 63.2 184 31.0
CARHR010240 Cardamine hirsuta HOM05D001896 ORTHO05D001862 3.5e-08 62.8 187 29.9
CAN.G1075.50 Capsicum annuum HOM05D001896 ORTHO05D001862 4.5e-08 62.4 182 33.0
Lj7P110T16 Lonicera japonica HOM05D001896 ORTHO05D001862 4.5e-08 62.4 183 31.1
Peaxi162Scf00449g00045 Petunia axillaris HOM05D001896 ORTHO05D001862 4.5e-08 62.4 188 33.0
Potri.014G006300 Populus trichocarpa HOM05D001896 ORTHO05D001862 4.5e-08 62.4 180 30.6
Sp1g08770 Schrenkiella parvula HOM05D001896 ORTHO05D001862 4.5e-08 62.4 187 32.6
TWI74G0977 Tripterygium wilfordii HOM05D001896 ORTHO05D001862 4.5e-08 62.4 186 32.8
Aqoxy6G02538 Aquilegia oxysepala HOM05D001896 ORTHO05D001862 5.9e-08 62.0 189 30.7
A06p06790 Brassica napus HOM05D001896 ORTHO05D001862 5.9e-08 62.0 184 31.0
A09p18270 Brassica napus HOM05D001896 ORTHO05D001862 5.9e-08 62.0 194 34.0
BraA06t23894Z Brassica rapa HOM05D001896 ORTHO05D001862 5.9e-08 62.0 184 31.0
BraA09t37458Z Brassica rapa HOM05D001896 ORTHO05D001862 5.9e-08 62.0 197 33.0
Oeu021445.1 Olea europaea HOM05D001896 ORTHO05D001862 5.9e-08 62.0 179 36.3
Sp2g05170 Schrenkiella parvula HOM05D001896 ORTHO05D001862 5.9e-08 62.0 193 33.2
Eucgr.L02595 Eucalyptus grandis HOM05D001896 ORTHO05D001862 7.7e-08 61.6 162 34.0
VMungo0251G2220 Vigna mungo HOM05D001896 ORTHO05D001862 7.7e-08 61.6 184 33.7
VMungo1309G2110 Vigna mungo HOM05D001896 ORTHO05D001862 7.7e-08 61.6 184 32.1
Gohir.A11G213300 Gossypium hirsutum HOM05D001896 ORTHO05D001862 1.0e-07 61.2 158 35.4
Psat5g038600 Pisum sativum HOM05D001896 ORTHO05D001862 1.0e-07 61.2 184 34.2
PGR031G2497 Punica granatum HOM05D001896 ORTHO05D001862 1.0e-07 61.2 195 31.3
TPR.G33724 Trifolium pratense HOM05D001896 ORTHO05D001862 1.0e-07 61.2 184 33.2
FvH4_2g03520 Fragaria vesca HOM05D001896 ORTHO05D001862 1.3e-07 60.8 197 32.0
Nitab4.5_0003129g0070 Nicotiana tabacum HOM05D001896 ORTHO05D001862 1.3e-07 60.8 194 32.0
BcaC04g22156 Brassica carinata HOM05D001896 ORTHO05D001862 1.7e-07 60.5 194 33.0
A09p65180 Brassica napus HOM05D001896 ORTHO05D001862 1.7e-07 60.5 189 30.2
C09p22750 Brassica napus HOM05D001896 ORTHO05D001862 1.7e-07 60.5 194 33.0
BolC9t55192H Brassica oleracea HOM05D001896 ORTHO05D001862 1.7e-07 60.5 194 33.0
Oeu039850.1 Olea europaea HOM05D001896 ORTHO05D001862 1.7e-07 60.5 188 33.0
Peaxi162Scf00548g00211 Petunia axillaris HOM05D001896 ORTHO05D001862 1.7e-07 60.5 182 34.1
Glyma.17G159800 Glycine max HOM05D001896 ORTHO05D001862 2.3e-07 60.1 184 31.5
Nitab4.5_0003129g0080 Nicotiana tabacum HOM05D001896 ORTHO05D001862 2.3e-07 60.1 163 34.4
QL06p039341 Quercus lobata HOM05D001896 ORTHO05D001862 2.3e-07 60.1 170 32.9
SalBow2G0839 Salvia bowleyana HOM05D001896 ORTHO05D001862 2.3e-07 60.1 189 33.9
BraA09t41861Z Brassica rapa HOM05D001896 ORTHO05D001862 2.9e-07 59.7 187 29.9
CiPaw.07G173200 Carya illinoinensis HOM05D001896 ORTHO05D001862 2.9e-07 59.7 152 33.6
CsaV3_6G044240 Cucumis sativus L. HOM05D001896 ORTHO05D001862 2.9e-07 59.7 186 31.7
FAN24G1511 Fragaria x ananassa HOM05D001896 ORTHO05D001862 2.9e-07 59.7 197 31.5
SalBow2G3314 Salvia bowleyana HOM05D001896 ORTHO05D001862 2.9e-07 59.7 189 33.9
Actinidia32848 Actinidia chinensis HOM05D001896 ORTHO05D001862 3.8e-07 59.3 185 31.4
BcaC07g41840 Brassica carinata HOM05D001896 ORTHO05D001862 3.8e-07 59.3 189 30.2
C08p49120 Brassica napus HOM05D001896 ORTHO05D001862 3.8e-07 59.3 189 30.2
Ciclev10002716m.g Citrus clementina HOM05D001896 ORTHO05D001862 3.8e-07 59.3 191 33.0
TPR.G24259 Trifolium pratense HOM05D001896 ORTHO05D001862 3.8e-07 59.3 158 31.0
ECA232G4825 Erigeron canadensis HOM05D001896 ORTHO05D001862 5.0e-07 58.9 153 32.7
Gorai.003G031600 Gossypium raimondii HOM05D001896 ORTHO05D001862 5.0e-07 58.9 183 31.7
Medtr1g017830 Medicago truncatula HOM05D001896 ORTHO05D001862 5.0e-07 58.9 187 32.6
BcaB08g37335 Brassica carinata HOM05D001896 ORTHO05D001862 6.6e-07 58.5 166 31.3
BcaC05g24808 Brassica carinata HOM05D001896 ORTHO05D001862 6.6e-07 58.5 185 31.4
C05p08280 Brassica napus HOM05D001896 ORTHO05D001862 6.6e-07 58.5 185 31.4
Manes.10G086000 Manihot esculenta HOM05D001896 ORTHO05D001862 6.6e-07 58.5 190 34.2
Potri.002G117100 Populus trichocarpa HOM05D001896 ORTHO05D001862 6.6e-07 58.5 196 32.7
Actinidia00358 Actinidia chinensis HOM05D004083 ORTHO05D005029 8.6e-07 58.2 166 30.7
BolC8t52445H Brassica oleracea HOM05D001896 ORTHO05D001862 8.6e-07 58.2 189 29.6
CiPaw.02G001600 Carya illinoinensis HOM05D001896 ORTHO05D001862 8.6e-07 58.2 187 28.9
Haze_15187 Corylus avellana HOM05D001896 ORTHO05D001862 8.6e-07 58.2 184 32.1
Gohir.D03G029900 Gossypium hirsutum HOM05D001896 ORTHO05D001862 8.6e-07 58.2 183 31.7
Gohir.D11G209900 Gossypium hirsutum HOM05D001896 ORTHO05D001862 8.6e-07 58.2 186 31.2
Gorai.007G225100 Gossypium raimondii HOM05D001896 ORTHO05D001862 8.6e-07 58.2 186 31.2
Phvul.003G233900 Phaseolus vulgaris HOM05D001896 ORTHO05D001862 8.6e-07 58.2 189 32.8
QL11p029532 Quercus lobata HOM05D001896 ORTHO05D001862 8.6e-07 58.2 188 33.0
BcaB08g37333 Brassica carinata HOM05D001896 ORTHO05D001862 1.1e-06 57.8 196 28.1
C09p22770 Brassica napus HOM05D001896 ORTHO05D001862 1.1e-06 57.8 197 32.0
BolC9t55194H Brassica oleracea HOM05D001896 ORTHO05D001862 1.1e-06 57.8 197 32.0
FvH4_1g17980 Fragaria vesca HOM05D001896 ORTHO05D001862 1.1e-06 57.8 186 33.3
Lalb_Chr22g0355731 Lupinus albus HOM05D001896 ORTHO05D001862 1.1e-06 57.8 180 32.8
Potri.007G006100 Populus trichocarpa HOM05D001896 ORTHO05D001862 1.1e-06 57.8 184 30.4
Sabra14G0008700 Salix brachista HOM05D001896 ORTHO05D001862 1.1e-06 57.8 159 34.6
FAN19G1457 Fragaria x ananassa HOM05D001896 ORTHO05D001862 1.5e-06 57.4 186 33.3
FAN23G2360 Fragaria x ananassa HOM05D001896 ORTHO05D001862 1.5e-06 57.4 166 34.3
FAN24G1421 Fragaria x ananassa HOM05D000312 ORTHO05D001862 1.5e-06 57.4 191 30.4
Eucgr.F00091 Eucalyptus grandis HOM05D001896 ORTHO05D001862 1.9e-06 57.0 189 34.4
FAN26G2644 Fragaria x ananassa HOM05D001896 ORTHO05D001862 1.9e-06 57.0 166 34.3
MD15G1067000 Malus domestica HOM05D001896 ORTHO05D001862 1.9e-06 57.0 184 33.2
Medtr4g097260 Medicago truncatula HOM05D001896 ORTHO05D001862 1.9e-06 57.0 192 28.6
THA.LOC104816764 Tarenaya hassleriana HOM05D001896 ORTHO05D001862 1.9e-06 57.0 202 32.2
BolC5t29578H Brassica oleracea HOM05D001896 ORTHO05D001862 2.5e-06 56.6 185 30.8
Duzib052G0412 Durio zibethinus HOM05D001896 ORTHO05D001862 2.5e-06 56.6 197 30.5
FAN15G3436 Fragaria x ananassa HOM05D000312 ORTHO05D000221 2.5e-06 56.6 194 30.4
PSO017G0117 Papaver somniferum HOM05D001896 ORTHO05D001862 2.5e-06 56.6 190 32.1
Lalb_Chr23g0267571 Lupinus albus HOM05D001896 ORTHO05D001862 3.3e-06 56.2 159 32.1
SalBow7G1468 Salvia bowleyana HOM05D001896 ORTHO05D001862 3.3e-06 56.2 188 33.5
Prupe.8G148800 Prunus persica HOM05D001896 ORTHO05D001862 4.3e-06 55.8 189 30.2
Cfa004148 Carpinus fangiana HOM05D001896 ORTHO05D001862 5.6e-06 55.5 180 33.3
Glyma.05G107000 Glycine max HOM05D001896 ORTHO05D001862 5.6e-06 55.5 185 29.7
Nitab4.5_0002379g0010 Nicotiana tabacum HOM05D001896 ORTHO05D001862 5.6e-06 55.5 200 33.0
TAR625G0391 Trochodendron aralioides HOM05D001896 ORTHO05D001862 5.6e-06 55.5 161 34.2
CAN.G1075.51 Capsicum annuum HOM05D001896 ORTHO05D001862 7.3e-06 55.1 161 31.7
FvH4_2g03511 Fragaria vesca HOM05D001896 ORTHO05D001862 7.3e-06 55.1 191 29.8
Lj4P164T35 Lonicera japonica HOM05D001896 ORTHO05D001862 7.3e-06 55.1 190 31.1
DCAR_003516 Daucus carota HOM05D001896 ORTHO05D001862 9.5e-06 54.7 179 29.6
Glyma.06G047600 Glycine max HOM05D001896 ORTHO05D001862 9.5e-06 54.7 181 33.1
Nitab4.5_0000142g0290 Nicotiana tabacum HOM05D001896 ORTHO05D001862 9.5e-06 54.7 161 33.5
PSO170G5938 Papaver somniferum HOM05D001896 ORTHO05D001862 9.5e-06 54.7 189 30.7


User provided reference genes

Program Settings