Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_009866 Daucus carota HOM05D007224 ORTHO05D009169 2.6e-147 525.4 268 100.0
TWI12G0175 Tripterygium wilfordii HOM05D007224 ORTHO05D009169 5.6e-78 295.0 257 62.6
TWI56G1112 Tripterygium wilfordii HOM05D007224 ORTHO05D009169 8.1e-77 291.2 256 61.3
GSVIVG01009296001 Vitis vinifera HOM05D007224 ORTHO05D009169 8.1e-77 291.2 234 66.2
Lj4A752T19 Lonicera japonica HOM05D007224 ORTHO05D009169 1.5e-75 287.0 262 59.9
CAN.G1239.16 Capsicum annuum HOM05D007224 ORTHO05D009169 9.9e-75 284.3 268 59.7
FAN27G0962 Fragaria x ananassa HOM05D007224 ORTHO05D009169 1.3e-74 283.9 257 59.1
Nitab4.5_0001494g0030 Nicotiana tabacum HOM05D007224 ORTHO05D009169 1.3e-74 283.9 275 58.9
Solyc04g077500.4 Solanum lycopersicum HOM05D007224 ORTHO05D009169 2.2e-74 283.1 279 57.0
Atru.chr13.874 Acer truncatum HOM05D007224 ORTHO05D009169 3.8e-74 282.3 259 58.3
Sopen04g031100 Solanum pennellii HOM05D007224 ORTHO05D009169 3.8e-74 282.3 279 57.3
Gorai.010G028000 Gossypium raimondii HOM05D007224 ORTHO05D009169 6.4e-74 281.6 263 58.6
Duzib116G0584 Durio zibethinus HOM05D007224 ORTHO05D009169 8.4e-74 281.2 238 61.8
FAN20G0095 Fragaria x ananassa HOM05D007224 ORTHO05D009169 1.4e-73 280.4 265 56.2
Gohir.D06G023300 Gossypium hirsutum HOM05D007224 ORTHO05D009169 1.4e-73 280.4 265 57.7
MSTRG.22207 Avicennia marina HOM05D007224 ORTHO05D009169 1.2e-72 277.3 245 60.8
Lsat_1_v5_gn_0_47281 Lactuca sativa HOM05D007224 ORTHO05D009169 1.2e-72 277.3 248 58.1
SGA_v2.0_scaffold238G43907 Striga asiatica HOM05D007224 ORTHO05D009169 1.6e-72 276.9 258 60.1
Gohir.A06G026200 Gossypium hirsutum HOM05D007224 ORTHO05D009169 2.1e-72 276.6 259 58.7
Ciclev10002194m.g Citrus clementina HOM05D007224 ORTHO05D009169 2.7e-72 276.2 260 58.8
RcHm_v2.0_Chr6g0310081 Rosa chinensis HOM05D007224 ORTHO05D009169 2.7e-72 276.2 264 57.6
MD08G1077300 Malus domestica HOM05D007224 ORTHO05D009169 4.6e-72 275.4 181 74.6
PGSC0003DMG400004920 Solanum tuberosum HOM05D007224 ORTHO05D009169 4.6e-72 275.4 277 55.6
MD15G1064800 Malus domestica HOM05D007224 ORTHO05D009169 7.9e-72 274.6 269 56.1
FvH4_2g32650 Fragaria vesca HOM05D007224 ORTHO05D009169 1.0e-71 274.2 258 57.8
FAN24G0100 Fragaria x ananassa HOM05D007224 ORTHO05D009169 1.8e-71 273.5 262 56.9
CiPaw.07G171700 Carya illinoinensis HOM05D007224 ORTHO05D009169 2.3e-71 273.1 253 60.1
Rhsim06G0064800 Rhododendron simsii HOM05D007224 ORTHO05D009169 2.3e-71 273.1 272 57.7
ClCG08G016710 Citrullus lanatus HOM05D007224 ORTHO05D009169 1.5e-70 270.4 206 65.0
Actinidia10224 Actinidia chinensis HOM05D007224 ORTHO05D009169 2.5e-70 269.6 255 57.3
PSO541G3785 Papaver somniferum HOM05D007224 ORTHO05D009169 2.5e-70 269.6 261 57.1
HanXRQChr04g0110471 Helianthus annuus HOM05D007224 ORTHO05D009169 3.3e-70 269.2 244 58.6
CsaV3_2G025920 Cucumis sativus L. HOM05D007224 ORTHO05D009169 4.3e-70 268.9 252 57.5
Peaxi162Scf01161g00120 Petunia axillaris HOM05D007224 ORTHO05D009169 9.6e-70 267.7 265 56.2
MELO3C010785.2 Cucumis melo HOM05D007224 ORTHO05D009169 1.3e-69 267.3 219 61.6
SalBow7G4028 Salvia bowleyana HOM05D007224 ORTHO05D009169 1.3e-69 267.3 247 57.5
Sc26g0004240 Simmondsia chinensis HOM05D007224 ORTHO05D009169 3.7e-69 265.8 250 57.6
Sp1g33790 Schrenkiella parvula HOM05D007224 ORTHO05D009169 6.2e-69 265.0 252 55.6
FAN15G3290 Fragaria x ananassa HOM05D007224 ORTHO05D009169 1.1e-68 264.2 203 64.0
BcaC08g42889 Brassica carinata HOM05D007224 ORTHO05D009169 1.8e-68 263.5 249 56.6
CSS0049759 Camellia sinensis var. sinensis HOM05D007224 ORTHO05D009169 1.8e-68 263.5 256 60.5
Carub.0001s3542 Capsella rubella HOM05D007224 ORTHO05D009169 2.4e-68 263.1 200 63.5
C06p01100 Brassica napus HOM05D007224 ORTHO05D009169 3.1e-68 262.7 248 56.5
Thhalv10011734m.g Eutrema salsugineum HOM05D007224 ORTHO05D009169 3.1e-68 262.7 249 55.8
TAR628G0831 Trochodendron aralioides HOM05D007224 ORTHO05D009169 3.1e-68 262.7 259 55.6
A10p07160 Brassica napus HOM05D007224 ORTHO05D009169 6.9e-68 261.5 249 55.8
vmacro21415 Vaccinium macrocarpon HOM05D007224 ORTHO05D009169 1.2e-67 260.8 283 55.8
Haze_22381 Corylus avellana HOM05D007224 ORTHO05D009169 1.5e-67 260.4 247 56.7
AT1G44920 Arabidopsis thaliana HOM05D007224 ORTHO05D009169 2.0e-67 260.0 250 57.2
PSO675G4824 Papaver somniferum HOM05D007224 ORTHO05D009169 2.0e-67 260.0 264 56.4
Migut.C00453 Erythranthe guttata HOM05D007224 ORTHO05D009169 2.6e-67 259.6 247 56.3
PGR083G2708 Punica granatum HOM05D007224 ORTHO05D009169 2.6e-67 259.6 254 56.7
THA.LOC104799830 Tarenaya hassleriana HOM05D007224 ORTHO05D009169 3.4e-67 259.2 213 62.0
Cfa013733 Carpinus fangiana HOM05D007224 ORTHO05D009169 4.5e-67 258.8 256 55.9
CARHR036150 Cardamine hirsuta HOM05D007224 ORTHO05D009169 5.8e-67 258.5 189 65.6
Hund05274 Selenicereus undatus HOM05D007224 ORTHO05D009169 5.8e-67 258.5 266 53.8
Ah.11g039150 Amaranthus hybridus HOM05D007224 ORTHO05D009169 1.0e-66 257.7 228 62.7
Cc10_g07670 Coffea canephora HOM05D007224 ORTHO05D009169 1.3e-66 257.3 260 57.7
AL1G52590 Arabidopsis lyrata HOM05D007224 ORTHO05D009169 1.7e-66 256.9 248 56.0
CDE04G2175 Ceratophyllum demersum HOM05D007224 ORTHO05D009169 2.9e-66 256.1 236 56.4
CANSAT56G0920 Cannabis sativa HOM05D007224 ORTHO05D009169 3.8e-66 255.8 259 54.8
Potri.002G114900 Populus trichocarpa HOM05D007224 ORTHO05D009169 1.4e-65 253.8 262 56.9
Dinv44928 Davidia involucrata HOM05D007224 ORTHO05D009169 2.5e-65 253.1 174 70.7
Lj5g0004917 Lotus japonicus HOM05D007224 ORTHO05D009169 3.2e-65 252.7 226 60.2
COL.COLO4_28456 Corchorus olitorius HOM05D007224 ORTHO05D009169 5.5e-65 251.9 260 54.2
BraA10t42965Z Brassica rapa HOM05D007224 ORTHO05D009169 1.2e-64 250.8 271 52.4
Nitab4.5_0010252g0010 Nicotiana tabacum HOM05D007224 ORTHO05D009169 1.2e-64 250.8 274 55.1
BolC6t35243H Brassica oleracea HOM05D007224 ORTHO05D009169 2.7e-64 249.6 267 52.4
Thecc.08G084200 Theobroma cacao HOM05D007224 ORTHO05D009169 4.6e-64 248.8 255 54.5
unitig_52.g17426 Utricularia gibba HOM05D007224 ORTHO05D009169 4.6e-64 248.8 196 63.8
TPR.G13169 Trifolium pratense HOM05D007224 ORTHO05D009169 6.0e-64 248.4 224 55.4
Aa31LG7G10090 Aethionema arabicum HOM05D007224 ORTHO05D009169 7.9e-64 248.1 281 49.5
Ca_06981_v3 Cicer arietinum L. HOM05D007224 ORTHO05D009169 1.3e-63 247.3 196 61.7
Medtr1g017450 Medicago truncatula HOM05D007224 ORTHO05D009169 3.0e-63 246.1 250 54.8
VMungo0647G2475 Vigna mungo HOM05D007224 ORTHO05D009169 3.9e-63 245.7 229 57.2
Psat6g017040 Pisum sativum HOM05D007224 ORTHO05D009169 1.5e-62 243.8 216 56.9
Sabra02G0090900 Salix brachista HOM05D007224 ORTHO05D009169 2.5e-62 243.0 319 47.0
Nn5g30669 Nelumbo nucifera HOM05D007224 ORTHO05D009169 3.3e-62 242.7 258 52.3
BcaB07g33899 Brassica carinata HOM05D007224 ORTHO05D009169 7.4e-62 241.5 250 53.6
EL10Ac1g02348 Beta vulgaris HOM05D007224 ORTHO05D009169 1.6e-61 240.4 249 54.6
MBI16_g06074_MAGBIO Magnolia biondii HOM05D007224 ORTHO05D009169 1.6e-61 240.4 252 52.0
Manes.18G049850 Manihot esculenta HOM05D007224 ORTHO05D009169 1.1e-60 237.7 264 51.5
Phvul.001G031100 Phaseolus vulgaris HOM05D007224 ORTHO05D009169 2.4e-60 236.5 229 55.9
ATR0739G089 Amborella trichopoda HOM05D007224 ORTHO05D009169 3.1e-60 236.1 171 66.7
Prupe.1G418700 Prunus persica HOM05D007224 ORTHO05D009169 9.0e-60 234.6 263 51.7
Aqoxy6G02448 Aquilegia oxysepala HOM05D007224 ORTHO05D009169 1.2e-59 234.2 281 52.0
Lalb_Chr22g0355811 Lupinus albus HOM05D007224 ORTHO05D009169 1.7e-58 230.3 257 51.8
Zm00001eb056020 Zea mays HOM05D007224 ORTHO05D009169 2.2e-58 229.9 197 57.9
Glyma.17G232300 Glycine max HOM05D007224 ORTHO05D009169 1.4e-57 227.3 257 50.2
Os03g0729100 Oryza sativa ssp. japonica HOM05D007224 ORTHO05D009169 1.9e-57 226.9 193 57.5
HPP92_007712 Vanilla planifolia HOM05D007224 ORTHO05D009169 2.7e-56 223.0 255 48.2
arahy.Tifrunner.gnm1.ann1.TQ0B6U Arachis hypogaea HOM05D007224 ORTHO05D009169 8.2e-53 211.5 235 51.9
ECA232G4225 Erigeron canadensis HOM05D007224 ORTHO05D009169 2.4e-52 209.9 130 75.4
Mapoly0039s0075 Marchantia polymorpha HOM05D007224 ORTHO05D009169 1.2e-51 207.6 192 54.7
Actinidia19293 Actinidia chinensis HOM05D007224 ORTHO05D009169 1.4e-47 194.1 121 76.9
SMO147G0155 Selaginella moellendorffii HOM05D007224 ORTHO05D009169 6.3e-45 185.3 171 53.8
arahy.Tifrunner.gnm1.ann1.XZQ8AB Arachis hypogaea HOM05D007224 ORTHO05D009169 4.1e-44 182.6 216 49.1
CDE07G0245 Ceratophyllum demersum HOM05D007224 ORTHO05D009169 1.3e-42 177.6 193 51.3
Pp3c6_15140 Physcomitrium patens HOM05D007224 ORTHO05D009169 6.5e-42 175.3 212 42.0
Haze_22389 Corylus avellana HOM05D007224 ORTHO05D009169 3.0e-39 166.4 188 52.1
Sed0020426 Sechium edule HOM05D007224 ORTHO05D009169 6.7e-39 165.2 122 69.7
CBR_g45556 Chara braunii HOM05D000019 ORTHO05D000002 7.4e-38 161.8 180 46.1
Cre13.g569250 Chlamydomonas reinhardtii HOM05D007224 ORTHO05D009169 5.5e-33 145.6 191 45.5
AUR62024535 Chenopodium quinoa HOM05D007224 ORTHO05D009169 3.4e-30 136.3 98 70.4
AUR62033890 Chenopodium quinoa HOM05D007224 ORTHO05D009169 3.4e-30 136.3 174 50.6
Cpa.g.sc2059.2 Carica papaya HOM05D007224 ORTHO05D009169 3.2e-25 119.8 148 50.0
Zm00001eb035950 Zea mays HOM05D007224 ORTHO05D009169 1.4e-23 114.4 76 68.4
Glyma.14G089100 Glycine max HOM05D007224 ORTHO05D009169 3.4e-22 109.8 84 60.7
MCO05G240 Micromonas commoda HOM05D007224 ORTHO05D009169 1.4e-20 104.4 144 41.0
Zm00001eb141580 Zea mays HOM05D007224 ORTHO05D445531 3.3e-17 93.2 95 53.7
Sabra08G0162900 Salix brachista HOM05D003359 ORTHO05D007088 2.0e-11 73.9 42 88.1


User provided reference genes

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