Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_009827 Daucus carota HOM05D001383 ORTHO05D000309 1.0e-78 296.6 141 100.0
DCAR_017399 Daucus carota HOM05D001383 ORTHO05D000309 7.7e-26 120.9 132 40.2
DCAR_022041 Daucus carota HOM05D000130 ORTHO05D000257 4.2e-24 115.2 103 47.6
COL.COLO4_06499 Corchorus olitorius HOM05D015200 ORTHO05D000309 8.2e-12 74.3 133 33.1
COL.COLO4_15560 Corchorus olitorius HOM05D015200 ORTHO05D000309 8.2e-12 74.3 63 46.0
COL.COLO4_30330 Corchorus olitorius HOM05D015200 ORTHO05D000309 2.6e-10 69.3 140 31.4
Medtr2g017540 Medicago truncatula HOM05D001383 ORTHO05D000309 4.5e-10 68.6 81 45.7
Hma1.2p1_0362F.1_g136570 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 7.7e-10 67.8 119 32.8
Eucgr.J03169 Eucalyptus grandis HOM05D001383 ORTHO05D000309 2.2e-09 66.2 66 47.0
DCAR_001866 Daucus carota HOM05D001383 ORTHO05D000309 3.8e-09 65.5 103 34.0
Eucgr.L02287 Eucalyptus grandis HOM05D001383 ORTHO05D000309 3.8e-09 65.5 115 34.8
Eucgr.A00047 Eucalyptus grandis HOM05D001383 ORTHO05D000309 5.0e-09 65.1 78 42.3
Eucgr.E03636 Eucalyptus grandis HOM05D001383 ORTHO05D000309 5.0e-09 65.1 78 42.3
Eucgr.C01434 Eucalyptus grandis HOM05D001383 ORTHO05D000309 6.5e-09 64.7 72 43.1
Eucgr.H02671 Eucalyptus grandis HOM05D001383 ORTHO05D000309 1.5e-08 63.5 94 36.2
Hma1.2p1_0785F.1_g217480 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 1.5e-08 63.5 55 45.5
COL.COLO4_33074 Corchorus olitorius HOM05D015200 ORTHO05D000309 1.9e-08 63.2 55 43.6
Eucgr.L02571 Eucalyptus grandis HOM05D001383 ORTHO05D000309 2.5e-08 62.8 106 34.0
Eucgr.E01520 Eucalyptus grandis HOM05D001383 ORTHO05D000309 3.2e-08 62.4 120 30.0
Eucgr.G02031 Eucalyptus grandis HOM05D015495 ORTHO05D000309 3.2e-08 62.4 138 30.4
Eucgr.C02166 Eucalyptus grandis HOM05D001383 ORTHO05D000309 4.2e-08 62.0 78 41.0
Eucgr.L02007 Eucalyptus grandis HOM05D001383 ORTHO05D000309 4.2e-08 62.0 78 41.0
Hma1.2p1_1219F.1_g267960 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 4.2e-08 62.0 83 36.1
BcaB03g16006 Brassica carinata HOM05D007774 ORTHO05D000309 5.5e-08 61.6 100 33.0
Medtr2g008290 Medicago truncatula HOM05D001383 ORTHO05D000309 5.5e-08 61.6 101 36.6
Psat0s2572g0080 Pisum sativum HOM05D018012 ORTHO05D000309 5.5e-08 61.6 101 31.7
DCAR_031437 Daucus carota HOM05D001383 ORTHO05D000309 7.2e-08 61.2 93 37.6
Eucgr.A00901 Eucalyptus grandis HOM05D001383 ORTHO05D000309 7.2e-08 61.2 58 46.6
Eucgr.A01387 Eucalyptus grandis HOM05D001383 ORTHO05D000309 7.2e-08 61.2 58 46.6
Eucgr.A01677 Eucalyptus grandis HOM05D001383 ORTHO05D000309 7.2e-08 61.2 58 46.6
Eucgr.J01886 Eucalyptus grandis HOM05D001383 ORTHO05D000309 9.4e-08 60.8 74 40.5
Eucgr.L00906 Eucalyptus grandis HOM05D015495 ORTHO05D000309 9.4e-08 60.8 138 30.4
DCAR_006044 Daucus carota HOM05D001383 ORTHO05D000309 1.2e-07 60.5 87 34.5
Eucgr.D01113 Eucalyptus grandis HOM05D001383 ORTHO05D000309 1.2e-07 60.5 72 41.7
Eucgr.L01799 Eucalyptus grandis HOM05D001383 ORTHO05D000309 1.2e-07 60.5 70 41.4
Eucgr.B01616 Eucalyptus grandis HOM05D001383 ORTHO05D000309 1.6e-07 60.1 75 42.7
DCAR_000974 Daucus carota HOM05D001383 ORTHO05D000309 2.1e-07 59.7 85 36.5
Eucgr.K02370 Eucalyptus grandis HOM05D001383 ORTHO05D000309 2.1e-07 59.7 101 32.7
Hma1.2p1_0048F.1_g028060 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 2.1e-07 59.7 113 31.9
Hma1.2p1_1389F.1_g280030 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 2.1e-07 59.7 113 31.9
Cfa012747 Carpinus fangiana HOM05D016218 ORTHO05D000309 2.7e-07 59.3 92 35.9
COL.COLO4_27467 Corchorus olitorius HOM05D015200 ORTHO05D000309 2.7e-07 59.3 62 45.2
DCAR_015227 Daucus carota HOM05D001383 ORTHO05D000309 2.7e-07 59.3 74 37.8
Hma1.2p1_0283F.1_g113450 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 2.7e-07 59.3 74 39.2
Nitab4.5_0004598g0010 Nicotiana tabacum HOM05D001883 ORTHO05D002184 2.7e-07 59.3 70 41.4
Eucgr.D00216 Eucalyptus grandis HOM05D001383 ORTHO05D000309 3.6e-07 58.9 75 40.0
Eucgr.H02341 Eucalyptus grandis HOM05D001383 ORTHO05D000309 3.6e-07 58.9 75 40.0
Lsat_1_v5_gn_3_138160 Lactuca sativa HOM05D009585 ORTHO05D000309 3.6e-07 58.9 107 33.6
Eucgr.L00016 Eucalyptus grandis HOM05D001383 ORTHO05D000309 4.7e-07 58.5 117 29.9
Lsat_1_v5_gn_4_124641 Lactuca sativa HOM05D028082 ORTHO05D000309 4.7e-07 58.5 63 39.7
Eucgr.H03328 Eucalyptus grandis HOM05D015495 ORTHO05D000309 6.1e-07 58.2 138 29.7
Eucgr.L01275 Eucalyptus grandis HOM05D001383 ORTHO05D000309 6.1e-07 58.2 75 40.0
Lsat_1_v5_gn_1_123660 Lactuca sativa HOM05D009585 ORTHO05D000309 6.1e-07 58.2 67 41.8
Lsat_1_v5_gn_5_164901 Lactuca sativa HOM05D009585 ORTHO05D000309 6.1e-07 58.2 67 41.8
Lsat_1_v5_gn_8_39100 Lactuca sativa HOM05D009585 ORTHO05D000309 6.1e-07 58.2 67 41.8
Lsat_1_v5_gn_8_440 Lactuca sativa HOM05D009585 ORTHO05D000309 6.1e-07 58.2 67 41.8
Lj8P510T6 Lonicera japonica HOM05D008126 ORTHO05D000309 6.1e-07 58.2 118 30.5
Peaxi162Scf00193g00720 Petunia axillaris HOM05D001883 ORTHO05D002184 6.1e-07 58.2 94 30.9
Cfa020977 Carpinus fangiana HOM05D016218 ORTHO05D000309 8.0e-07 57.8 92 34.8
DCAR_027645 Daucus carota HOM05D001383 ORTHO05D000309 8.0e-07 57.8 74 36.5
Lsat_1_v5_gn_1_30700 Lactuca sativa HOM05D009585 ORTHO05D013076 8.0e-07 57.8 67 41.8
Eucgr.D00391 Eucalyptus grandis HOM05D001383 ORTHO05D000309 1.0e-06 57.4 54 44.4
Hma1.2p1_0470F.1_g159220 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 1.0e-06 57.4 121 30.6
Nitab4.5_0029094g0020 Nicotiana tabacum HOM05D004040 ORTHO05D000309 1.0e-06 57.4 68 44.1
Peaxi162Scf00780g00416 Petunia axillaris HOM05D001883 ORTHO05D002184 1.0e-06 57.4 84 39.3
BcaB06g27506 Brassica carinata HOM05D007774 ORTHO05D000309 1.4e-06 57.0 60 43.3
COL.COLO4_25156 Corchorus olitorius HOM05D030152 ORTHO05D000309 1.4e-06 57.0 72 41.7
DCAR_023922 Daucus carota HOM05D001383 ORTHO05D000309 1.4e-06 57.0 85 35.3
DCAR_028751 Daucus carota HOM05D001383 ORTHO05D000309 1.4e-06 57.0 121 31.4
Eucgr.A00957 Eucalyptus grandis HOM05D007774 ORTHO05D000309 1.4e-06 57.0 73 38.4
Eucgr.E03477 Eucalyptus grandis HOM05D001383 ORTHO05D000309 1.4e-06 57.0 90 35.6
Hma1.2p1_0224F.1_g094550 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 1.4e-06 57.0 148 30.4
Hma1.2p1_1094F.1_g256460 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 1.4e-06 57.0 79 38.0
Lj7P745T14 Lonicera japonica HOM05D008126 ORTHO05D000309 1.4e-06 57.0 118 29.7
Cfa010532 Carpinus fangiana HOM05D016218 ORTHO05D000309 1.8e-06 56.6 79 36.7
Lsat_1_v5_gn_3_61181 Lactuca sativa HOM05D028082 ORTHO05D000309 1.8e-06 56.6 60 40.0
Lj1P1017T43 Lonicera japonica HOM05D008126 ORTHO05D000309 2.3e-06 56.2 109 33.9
Nitab4.5_0011664g0010 Nicotiana tabacum HOM05D004040 ORTHO05D000309 2.3e-06 56.2 68 42.6
Peaxi162Scf00137g00148 Petunia axillaris HOM05D004040 ORTHO05D000309 2.3e-06 56.2 84 39.3
Peaxi162Scf03301g00014 Petunia axillaris HOM05D001883 ORTHO05D002184 2.3e-06 56.2 94 31.9
Eucgr.H00233 Eucalyptus grandis HOM05D001383 ORTHO05D000309 3.0e-06 55.8 78 38.5
Lj5P838T14 Lonicera japonica HOM05D008126 ORTHO05D000309 3.0e-06 55.8 120 31.7
Medtr1g039350 Medicago truncatula HOM05D001383 ORTHO05D000309 3.0e-06 55.8 81 39.5
vmacro12616 Vaccinium macrocarpon HOM05D001383 ORTHO05D000309 3.0e-06 55.8 99 35.4
BcaB01g02010 Brassica carinata HOM05D007774 ORTHO05D000309 4.0e-06 55.5 108 30.6
BraA02t06821Z Brassica rapa HOM05D001038 ORTHO05D000395 4.0e-06 55.5 103 33.0
Cfa014980 Carpinus fangiana HOM05D016218 ORTHO05D000309 4.0e-06 55.5 92 35.9
DCAR_029957 Daucus carota HOM05D000089 ORTHO05D000104 4.0e-06 55.5 91 35.2
Lsat_1_v5_gn_6_181 Lactuca sativa HOM05D028082 ORTHO05D000309 4.0e-06 55.5 63 36.5
Peaxi162Scf00334g00003 Petunia axillaris HOM05D001883 ORTHO05D002184 4.0e-06 55.5 64 42.2
COL.COLO4_35283 Corchorus olitorius HOM05D023691 ORTHO05D000309 5.2e-06 55.1 88 36.4
DCAR_015783 Daucus carota HOM05D001383 ORTHO05D000309 5.2e-06 55.1 63 36.5
Lj2P720T1 Lonicera japonica HOM05D008126 ORTHO05D000309 5.2e-06 55.1 85 36.5
Lj8P545T2 Lonicera japonica HOM05D008126 ORTHO05D000309 5.2e-06 55.1 120 28.3
Peaxi162Scf00408g00847 Petunia axillaris HOM05D001883 ORTHO05D002184 5.2e-06 55.1 98 29.6
SalBow6G5997 Salvia bowleyana HOM05D008544 ORTHO05D010680 5.2e-06 55.1 61 45.9
BraA09t41073Z Brassica rapa HOM05D007774 ORTHO05D000309 6.7e-06 54.7 106 34.0
Peaxi162Scf00136g00616 Petunia axillaris HOM05D001883 ORTHO05D002184 6.7e-06 54.7 131 27.5
Peaxi162Scf00263g00027 Petunia axillaris HOM05D001883 ORTHO05D002184 6.7e-06 54.7 64 42.2
Peaxi162Scf00538g00714 Petunia axillaris HOM05D001883 ORTHO05D002184 6.7e-06 54.7 94 29.8
SGA_v2.0_scaffold310G48213 Striga asiatica HOM05D001383 ORTHO05D000309 6.7e-06 54.7 86 36.0
SGA_v2.0_scaffold59G20728 Striga asiatica HOM05D001383 ORTHO05D000309 6.7e-06 54.7 97 35.1
BcaNung05585 Brassica carinata HOM05D007774 ORTHO05D000309 8.8e-06 54.3 108 29.6
CiPaw.01G013100 Carya illinoinensis HOM05D009850 ORTHO05D011981 8.8e-06 54.3 100 33.0
DCAR_015948 Daucus carota HOM05D001383 ORTHO05D000309 8.8e-06 54.3 98 39.8
Peaxi162Scf00723g00110 Petunia axillaris HOM05D001383 ORTHO05D000309 8.8e-06 54.3 62 43.5
SGA_v2.0_scaffold14G07112 Striga asiatica HOM05D001383 ORTHO05D000309 8.8e-06 54.3 125 32.8


User provided reference genes

Program Settings