Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_009761 Daucus carota HOM05D006668 ORTHO05D008252 1.1e-218 763.1 404 100.0
Actinidia10993 Actinidia chinensis HOM05D006668 ORTHO05D008252 3.3e-66 256.5 472 41.7
Hma1.2p1_0002F.1_g002330 Hydrangea macrophylla HOM05D006668 ORTHO05D008252 7.0e-64 248.8 472 40.3
Peaxi162Scf00189g00018 Petunia axillaris HOM05D006668 ORTHO05D008252 7.0e-64 248.8 432 42.8
QL08p040692 Quercus lobata HOM05D006668 ORTHO05D008252 7.0e-64 248.8 436 43.3
TAR627G0647 Trochodendron aralioides HOM05D006668 ORTHO05D008252 1.4e-59 234.6 459 40.7
vmacro12351 Vaccinium macrocarpon HOM05D006668 ORTHO05D008252 4.0e-59 233.0 485 38.4
RcHm_v2.0_Chr7g0225261 Rosa chinensis HOM05D006668 ORTHO05D008252 5.7e-58 229.2 426 40.8
Oeu036086.1 Olea europaea HOM05D006668 ORTHO05D008252 7.5e-58 228.8 436 42.2
Manes.12G086300 Manihot esculenta HOM05D006668 ORTHO05D008252 2.2e-57 227.3 435 40.5
Rhsim06G0136200 Rhododendron simsii HOM05D006668 ORTHO05D008252 7.0e-56 222.2 489 37.0
Atru.chr6.2861 Acer truncatum HOM05D006668 ORTHO05D008252 3.5e-55 219.9 428 41.4
MD15G1126800 Malus domestica HOM05D006668 ORTHO05D008252 4.5e-55 219.5 424 39.6
Sopen07g027510 Solanum pennellii HOM05D006668 ORTHO05D008252 7.7e-55 218.8 423 41.4
Gorai.004G282700 Gossypium raimondii HOM05D006668 ORTHO05D008252 1.0e-54 218.4 428 41.6
COL.COLO4_07343 Corchorus olitorius HOM05D006668 ORTHO05D008252 1.3e-54 218.0 472 37.5
Hma1.2p1_0002F.1_g002320 Hydrangea macrophylla HOM05D006668 ORTHO05D008252 2.3e-54 217.2 203 59.1
Ciclev10015198m.g Citrus clementina HOM05D006668 ORTHO05D008252 2.9e-54 216.9 464 36.4
GSVIVG01020613001 Vitis vinifera HOM05D006668 ORTHO05D008252 5.0e-54 216.1 443 39.3
Cc05_g07800 Coffea canephora HOM05D006668 ORTHO05D008252 1.1e-53 214.9 432 40.7
Cpa.g.sc165.1 Carica papaya HOM05D006668 ORTHO05D008252 2.5e-53 213.8 435 39.5
PGSC0003DMG400009383 Solanum tuberosum HOM05D006668 ORTHO05D008252 2.5e-53 213.8 429 39.6
PSO541G3384 Papaver somniferum HOM05D006668 ORTHO05D008252 7.2e-53 212.2 460 39.3
Gohir.A08G243900 Gossypium hirsutum HOM05D006668 ORTHO05D008252 9.5e-53 211.8 448 37.9
Gohir.D08G264800 Gossypium hirsutum HOM05D006668 ORTHO05D008252 1.2e-52 211.5 428 41.4
Cfa014669 Carpinus fangiana HOM05D006668 ORTHO05D008252 2.8e-52 210.3 450 38.2
PSO675G8266 Papaver somniferum HOM05D006668 ORTHO05D008252 2.8e-52 210.3 455 38.5
Lalb_Chr03g0029681 Lupinus albus HOM05D006668 ORTHO05D008252 6.8e-51 205.7 451 38.1
CiPaw.03G182600 Carya illinoinensis HOM05D006668 ORTHO05D008252 8.9e-51 205.3 441 39.7
Solyc07g053560.3 Solanum lycopersicum HOM05D006668 ORTHO05D008252 1.2e-50 204.9 421 41.6
Prupe.2G094200 Prunus persica HOM05D006668 ORTHO05D008252 1.5e-50 204.5 437 39.1
FvH4_5g30510 Fragaria vesca HOM05D006668 ORTHO05D008252 3.7e-49 199.9 422 38.6
BolC9t55549H Brassica oleracea HOM05D006668 ORTHO05D008252 4.9e-49 199.5 414 39.6
FAN18G2410 Fragaria x ananassa HOM05D006668 ORTHO05D008252 4.9e-49 199.5 420 38.3
Nn1g06398 Nelumbo nucifera HOM05D006668 ORTHO05D008252 6.3e-49 199.1 433 38.8
FAN13G2061 Fragaria x ananassa HOM05D006668 ORTHO05D008252 8.3e-49 198.7 422 38.9
FAN08G3049 Fragaria x ananassa HOM05D006668 ORTHO05D008252 1.1e-48 198.4 420 38.1
BcaC04g21861 Brassica carinata HOM05D006668 ORTHO05D008252 1.4e-48 198.0 414 39.4
SalBow7G4646 Salvia bowleyana HOM05D006668 ORTHO05D008252 1.4e-48 198.0 427 37.7
C09p26530 Brassica napus HOM05D006668 ORTHO05D008252 1.8e-48 197.6 414 39.4
Duzib132G0616 Durio zibethinus HOM05D006668 ORTHO05D008252 3.1e-48 196.8 465 35.3
CANSAT54G0862 Cannabis sativa HOM05D006668 ORTHO05D008252 9.2e-48 195.3 424 38.4
CAN.G1808.7 Capsicum annuum HOM05D006668 ORTHO05D008252 9.2e-48 195.3 371 41.2
Sp2g08980 Schrenkiella parvula HOM05D006668 ORTHO05D008252 1.2e-47 194.9 437 37.3
PGR142G0029 Punica granatum HOM05D006668 ORTHO05D008252 2.7e-47 193.7 432 40.0
Ca_18916_v3 Cicer arietinum L. HOM05D006668 ORTHO05D008252 5.9e-47 192.6 443 35.9
TWI59G1373 Tripterygium wilfordii HOM05D006668 ORTHO05D008252 5.9e-47 192.6 438 37.9
arahy.Tifrunner.gnm1.ann1.Y4MWM5 Arachis hypogaea HOM05D006668 ORTHO05D008252 1.0e-46 191.8 446 35.2
Aqoxy1G02297 Aquilegia oxysepala HOM05D006668 ORTHO05D008252 2.3e-46 190.7 492 34.8
Glyma.12G119000 Glycine max HOM05D006668 ORTHO05D008252 3.8e-46 189.9 448 35.9
Nitab4.5_0000621g0040 Nicotiana tabacum HOM05D006668 ORTHO05D008252 5.0e-46 189.5 427 38.2
Aa31LG5G3090 Aethionema arabicum HOM05D006668 ORTHO05D008252 8.6e-46 188.7 456 35.3
Thecc.02G187500 Theobroma cacao HOM05D006668 ORTHO05D008252 1.5e-45 188.0 452 36.7
Medtr4g079100 Medicago truncatula HOM05D006668 ORTHO05D008252 2.5e-45 187.2 436 35.1
Migut.M00152 Erythranthe guttata HOM05D006668 ORTHO05D008252 3.3e-45 186.8 316 41.5
Glyma.06G287100 Glycine max HOM05D006668 ORTHO05D008252 5.6e-45 186.0 449 35.0
Nitab4.5_0006091g0020 Nicotiana tabacum HOM05D006668 ORTHO05D008252 5.6e-45 186.0 426 38.5
SGA_v2.0_scaffold70G23480 Striga asiatica HOM05D006668 ORTHO05D008252 1.6e-44 184.5 435 38.9
Sc12g0003270 Simmondsia chinensis HOM05D006668 ORTHO05D008252 2.1e-44 184.1 439 36.4
Hund01006 Selenicereus undatus HOM05D006668 ORTHO05D008252 2.3e-43 180.6 454 34.8
A09p20930 Brassica napus HOM05D006668 ORTHO05D008252 5.2e-43 179.5 418 37.3
BraA09t37693Z Brassica rapa HOM05D006668 ORTHO05D008252 5.2e-43 179.5 418 37.3
ECA232G0319 Erigeron canadensis HOM05D006668 ORTHO05D008252 8.9e-43 178.7 425 36.2
TPR.G14253 Trifolium pratense HOM05D006668 ORTHO05D008252 3.4e-42 176.8 456 34.6
Potri.017G017200 Populus trichocarpa HOM05D006668 ORTHO05D008252 7.5e-42 175.6 500 34.6
CDE10G0622 Ceratophyllum demersum HOM05D006668 ORTHO05D008252 9.8e-42 175.3 415 36.1
SGA_v2.0_scaffold58G20553 Striga asiatica HOM05D006668 ORTHO05D008252 9.8e-42 175.3 423 38.3
Lsat_1_v5_gn_8_69500 Lactuca sativa HOM05D006668 ORTHO05D008252 2.9e-41 173.7 418 35.6
AL8G15870 Arabidopsis lyrata HOM05D006668 ORTHO05D008252 6.4e-41 172.6 434 35.9
Psat7g136840 Pisum sativum HOM05D006668 ORTHO05D008252 1.4e-40 171.4 433 35.1
THA.LOC104801157 Tarenaya hassleriana HOM05D006668 ORTHO05D008252 1.9e-40 171.0 456 34.0
Carub.0008s0437 Capsella rubella HOM05D006668 ORTHO05D008252 2.4e-40 170.6 429 34.5
AT5G44150 Arabidopsis thaliana HOM05D006668 ORTHO05D008252 2.7e-39 167.2 417 36.5
VMungo0037G0001 Vigna mungo HOM05D006668 ORTHO05D008252 4.6e-39 166.4 437 32.5
MSTRG.5024 Avicennia marina HOM05D006668 ORTHO05D008252 6.0e-39 166.0 451 34.4
MBI06_g42697_MAGBIO Magnolia biondii HOM05D006668 ORTHO05D008252 7.8e-39 165.6 471 33.3
Sed0009608 Sechium edule HOM05D006668 ORTHO05D008252 1.0e-38 165.2 436 35.1
MELO3C018863.2 Cucumis melo HOM05D006668 ORTHO05D008252 1.5e-37 161.4 413 34.1
Thhalv10003234m.g Eutrema salsugineum HOM05D006668 ORTHO05D008252 1.5e-37 161.4 421 35.4
Lj3g0004052 Lotus japonicus HOM05D006668 ORTHO05D008252 1.5e-37 161.4 430 33.5
Sabra17G0013400 Salix brachista HOM05D006668 ORTHO05D008252 1.9e-37 161.0 467 35.1
CARHR179120 Cardamine hirsuta HOM05D006668 ORTHO05D008252 3.3e-37 160.2 304 40.8
HanXRQChr17g0555041 Helianthus annuus HOM05D006668 ORTHO05D008252 3.3e-37 160.2 411 36.5
ClCG00G003780 Citrullus lanatus HOM05D006668 ORTHO05D008252 9.5e-37 158.7 440 34.3
ClCG02G002300 Citrullus lanatus HOM05D006668 ORTHO05D008252 9.5e-37 158.7 440 34.3
Phvul.010G089800 Phaseolus vulgaris HOM05D006668 ORTHO05D008252 6.2e-36 156.0 437 32.3
ClCG03G006150 Citrullus lanatus HOM05D006668 ORTHO05D008252 8.9e-35 152.1 432 33.3
CsaV3_7G003140 Cucumis sativus L. HOM05D006668 ORTHO05D008252 3.4e-34 150.2 412 32.8
AUR62036068 Chenopodium quinoa HOM05D006668 ORTHO05D008252 9.8e-34 148.7 478 32.6
BcaC06g31649 Brassica carinata HOM05D006668 ORTHO05D008252 8.3e-33 145.6 411 33.3
EL10Ac9g20828 Beta vulgaris HOM05D006668 ORTHO05D008252 1.7e-30 137.9 491 29.5
Eucgr.K01063 Eucalyptus grandis HOM05D006668 ORTHO05D008252 2.1e-28 131.0 444 33.8
Oeu016899.1 Olea europaea HOM05D006668 ORTHO05D008252 3.6e-28 130.2 291 34.4
Zm00001eb295870 Zea mays HOM05D006668 ORTHO05D008252 3.6e-28 130.2 471 29.3
Haze_13261 Corylus avellana HOM05D006668 ORTHO05D008252 4.7e-28 129.8 170 48.2
HPP92_023281 Vanilla planifolia HOM05D006668 ORTHO05D008252 5.8e-26 122.9 447 30.4
Dinv06849 Davidia involucrata HOM05D006668 ORTHO05D008252 4.9e-25 119.8 270 40.4
Os05g0564000 Oryza sativa ssp. japonica HOM05D006668 ORTHO05D008252 4.9e-25 119.8 192 38.5
BcaC04g21859 Brassica carinata HOM05D006668 ORTHO05D008252 1.9e-24 117.9 179 44.1
SEGI_30235 Sequoiadendron giganteum HOM05D006668 ORTHO05D008252 6.6e-22 109.4 534 27.0
CSS0030364 Camellia sinensis var. sinensis HOM05D006668 ORTHO05D008252 2.5e-21 107.5 146 47.9
Sed0015399 Sechium edule HOM05D006668 ORTHO05D008252 4.7e-20 103.2 426 29.6
CSS0015867 Camellia sinensis var. sinensis HOM05D006668 ORTHO05D008252 6.2e-20 102.8 129 52.7
Duzib248G1400 Durio zibethinus HOM05D006668 ORTHO05D008252 2.4e-16 90.9 319 30.7
ATR0602G055 Amborella trichopoda HOM05D006668 ORTHO05D008252 2.7e-15 87.4 304 30.9
BcaB07g30967 Brassica carinata HOM05D006668 ORTHO05D008252 2.6e-10 70.9 150 38.7
ATR0602G285 Amborella trichopoda HOM05D006668 ORTHO05D008252 6.4e-09 66.2 116 37.9
AUR62043432 Chenopodium quinoa HOM05D006668 ORTHO05D008252 3.5e-07 60.5 129 39.5
Mapoly0050s0110 Marchantia polymorpha HOM05D006668 ORTHO05D008252 4.6e-07 60.1 445 25.8


User provided reference genes

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