Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_009675 Daucus carota HOM05D006942 ORTHO05D008737 6.7e-148 527.3 266 100.0
DCAR_019882 Daucus carota HOM05D006942 ORTHO05D008737 7.0e-113 411.0 277 73.3
MELO3C026901.2 Cucumis melo HOM05D006942 ORTHO05D008737 5.8e-91 338.2 280 62.1
FvH4_3g25250 Fragaria vesca HOM05D006942 ORTHO05D008737 5.8e-91 338.2 192 81.2
FAN21G2944 Fragaria x ananassa HOM05D006942 ORTHO05D008737 5.8e-91 338.2 191 81.2
QL07p020181 Quercus lobata HOM05D006942 ORTHO05D008737 1.7e-90 336.7 283 65.0
COL.COLO4_13617 Corchorus olitorius HOM05D006942 ORTHO05D008737 2.2e-90 336.3 186 83.3
Nn7g35832 Nelumbo nucifera HOM05D006942 ORTHO05D008737 2.2e-90 336.3 201 77.1
ClCG10G013230 Citrullus lanatus HOM05D006942 ORTHO05D008737 3.7e-90 335.5 275 62.9
Nn2g15884 Nelumbo nucifera HOM05D002140 ORTHO05D008737 3.7e-90 335.5 272 61.8
Sed0013150 Sechium edule HOM05D006942 ORTHO05D008737 3.7e-90 335.5 277 63.2
FAN16G3006 Fragaria x ananassa HOM05D006942 ORTHO05D008737 6.4e-90 334.7 192 80.7
Manes.08G149200 Manihot esculenta HOM05D006942 ORTHO05D008737 8.3e-90 334.3 186 82.3
CsaV3_3G043400 Cucumis sativus L. HOM05D006942 ORTHO05D008737 1.4e-89 333.6 280 61.4
RcHm_v2.0_Chr5g0046891 Rosa chinensis HOM05D006942 ORTHO05D008737 1.4e-89 333.6 184 83.2
Thecc.05G293100 Theobroma cacao HOM05D006942 ORTHO05D008737 1.4e-89 333.6 253 66.0
ECA233G4155 Erigeron canadensis HOM05D006942 ORTHO05D008737 2.4e-89 332.8 261 64.8
TAR633G0669 Trochodendron aralioides HOM05D006942 ORTHO05D008737 3.2e-89 332.4 197 79.7
vmacro09146 Vaccinium macrocarpon HOM05D006942 ORTHO05D008737 7.0e-89 331.3 265 63.4
CANSAT78G1082 Cannabis sativa HOM05D006942 ORTHO05D008737 9.2e-89 330.9 284 63.0
Potri.013G059500 Populus trichocarpa HOM05D006942 ORTHO05D008737 9.2e-89 330.9 241 67.2
GSVIVG01033386001 Vitis vinifera HOM05D006942 ORTHO05D008737 9.2e-89 330.9 180 82.8
Gohir.D13G109500 Gossypium hirsutum HOM05D006942 ORTHO05D008737 1.6e-88 330.1 218 74.3
Gorai.013G123100 Gossypium raimondii HOM05D006942 ORTHO05D008737 1.6e-88 330.1 218 74.3
Rhsim04G0087000 Rhododendron simsii HOM05D006942 ORTHO05D008737 2.7e-88 329.3 263 63.5
SpUn0001_1050 Schrenkiella parvula HOM05D006942 ORTHO05D008737 4.6e-88 328.6 187 79.7
BcaC04g22009 Brassica carinata HOM05D006942 ORTHO05D008737 7.8e-88 327.8 192 77.1
A09p19530 Brassica napus HOM05D006942 ORTHO05D008737 7.8e-88 327.8 192 77.1
C09p24900 Brassica napus HOM05D006942 ORTHO05D008737 7.8e-88 327.8 192 77.1
BolC9t55381H Brassica oleracea HOM05D006942 ORTHO05D008737 7.8e-88 327.8 192 77.1
MD12G1002500 Malus domestica HOM05D006942 ORTHO05D008737 7.8e-88 327.8 180 82.8
PSO339G1210 Papaver somniferum HOM05D006942 ORTHO05D008737 7.8e-88 327.8 280 60.7
Gorai.007G287900 Gossypium raimondii HOM05D006942 ORTHO05D008737 1.0e-87 327.4 254 65.4
BcaB07g31088 Brassica carinata HOM05D006942 ORTHO05D008737 3.0e-87 325.9 188 78.7
HanXRQChr13g0398101 Helianthus annuus HOM05D006942 ORTHO05D008737 3.9e-87 325.5 191 79.1
TWI34G0045 Tripterygium wilfordii HOM05D006942 ORTHO05D008737 5.0e-87 325.1 202 78.2
Cpa.g.sc51.94 Carica papaya HOM05D006942 ORTHO05D008737 6.6e-87 324.7 299 57.5
THA.LOC104823787 Tarenaya hassleriana HOM05D006942 ORTHO05D008737 6.6e-87 324.7 241 66.0
MBI11_g05460_MAGBIO Magnolia biondii HOM05D006942 ORTHO05D008737 8.6e-87 324.3 204 74.0
Sed0025081 Sechium edule HOM05D006942 ORTHO05D008737 1.1e-86 323.9 275 62.2
CARHR028870 Cardamine hirsuta HOM05D006942 ORTHO05D008737 1.5e-86 323.6 186 79.6
Lsat_1_v5_gn_6_36781 Lactuca sativa HOM05D006942 ORTHO05D008737 1.9e-86 323.2 187 80.7
Peaxi162Scf00076g01036 Petunia axillaris HOM05D006942 ORTHO05D008737 1.9e-86 323.2 291 58.1
AL1G64670 Arabidopsis lyrata HOM05D006942 ORTHO05D008737 3.3e-86 322.4 195 75.4
Duzib177G1195 Durio zibethinus HOM05D006942 ORTHO05D008737 3.3e-86 322.4 240 66.7
Atru.chr2.1323 Acer truncatum HOM05D006942 ORTHO05D008737 4.3e-86 322.0 203 74.4
SGA_v2.0_scaffold50G18512 Striga asiatica HOM05D006942 ORTHO05D008737 4.3e-86 322.0 191 79.1
Carub.0002s0962 Capsella rubella HOM05D006942 ORTHO05D008737 5.6e-86 321.6 187 77.5
Ciclev10021582m.g Citrus clementina HOM05D006942 ORTHO05D008737 9.5e-86 320.9 262 61.1
MSTRG.19939 Avicennia marina HOM05D006942 ORTHO05D008737 1.2e-85 320.5 187 77.5
Thhalv10008350m.g Eutrema salsugineum HOM05D006942 ORTHO05D008737 1.2e-85 320.5 179 79.9
AT2G23840 Arabidopsis thaliana HOM05D006942 ORTHO05D008737 1.6e-85 320.1 180 80.0
Cc00_g08890 Coffea canephora HOM05D006942 ORTHO05D008737 1.6e-85 320.1 192 76.6
PGR042G3330 Punica granatum HOM05D006942 ORTHO05D008737 1.6e-85 320.1 223 68.6
Gohir.A13G105500 Gossypium hirsutum HOM05D006942 ORTHO05D008737 1.1e-84 317.4 185 79.5
Eucgr.A02087 Eucalyptus grandis HOM05D006942 ORTHO05D008737 8.9e-84 314.3 186 76.9
Aqoxy2G00557 Aquilegia oxysepala HOM05D006942 ORTHO05D008737 2.0e-83 313.2 217 70.0
arahy.Tifrunner.gnm1.ann1.0W916P Arachis hypogaea HOM05D006942 ORTHO05D008737 2.0e-83 313.2 185 78.9
Lj1g0019871 Lotus japonicus HOM05D006942 ORTHO05D008737 2.0e-83 313.2 192 75.5
Migut.J01895 Erythranthe guttata HOM05D006942 ORTHO05D008737 4.4e-83 312.0 180 80.0
Eucgr.K01480 Eucalyptus grandis HOM05D006942 ORTHO05D008737 7.5e-83 311.2 191 74.3
Sabra19G0041400 Salix brachista HOM05D006942 ORTHO05D008737 7.5e-83 311.2 188 77.7
Haze_19409 Corylus avellana HOM05D006942 ORTHO05D008737 1.3e-82 310.5 314 52.5
Phvul.001G109600 Phaseolus vulgaris HOM05D006942 ORTHO05D008737 2.2e-82 309.7 182 79.7
Lalb_Chr24g0403081 Lupinus albus HOM05D006942 ORTHO05D008737 2.9e-82 309.3 186 78.0
ATR0697G165 Amborella trichopoda HOM05D006942 ORTHO05D008737 4.9e-82 308.5 180 78.3
VMungo1383G0897 Vigna mungo HOM05D006942 ORTHO05D008737 1.1e-81 307.4 182 78.6
Glyma.16G042200 Glycine max HOM05D006942 ORTHO05D008737 1.4e-81 307.0 186 77.4
Glyma.19G110300 Glycine max HOM05D006942 ORTHO05D008737 3.2e-81 305.8 182 79.1
CDE10G0368 Ceratophyllum demersum HOM05D006942 ORTHO05D008737 5.4e-81 305.1 273 56.8
Medtr7g085420 Medicago truncatula HOM05D006942 ORTHO05D008737 1.6e-80 303.5 184 77.2
Psat3g089160 Pisum sativum HOM05D006942 ORTHO05D008737 2.7e-80 302.8 193 73.1
TPR.G5873 Trifolium pratense HOM05D006942 ORTHO05D008737 1.0e-79 300.8 185 75.1
HPP92_018642 Vanilla planifolia HOM05D006942 ORTHO05D008737 1.3e-79 300.4 203 70.0
Aa31LG2G1990 Aethionema arabicum HOM05D006942 ORTHO05D008737 3.0e-79 299.3 200 71.0
PGR142G1268 Punica granatum HOM05D006942 ORTHO05D008737 4.0e-76 288.9 277 56.7
TAR623G0107 Trochodendron aralioides HOM05D002140 ORTHO05D002382 2.0e-75 286.6 164 79.3
Lalb_Chr06g0173931 Lupinus albus HOM05D006942 ORTHO05D008737 7.6e-75 284.6 227 62.1
CDE06G2457 Ceratophyllum demersum HOM05D006942 ORTHO05D008737 2.9e-74 282.7 190 67.9
EL10Ac3g06808 Beta vulgaris HOM05D006942 ORTHO05D008737 9.2e-73 277.7 234 59.0
Os07g0170200 Oryza sativa ssp. japonica HOM05D006942 ORTHO05D008737 2.7e-72 276.2 163 77.3
CSS0046453 Camellia sinensis var. sinensis HOM05D006942 ORTHO05D008737 1.1e-70 270.8 288 53.5
Gohir.D11G268200 Gossypium hirsutum HOM05D006942 ORTHO05D008737 2.8e-69 266.2 254 55.9
Prupe.7G002400 Prunus persica HOM05D006942 ORTHO05D008737 6.2e-69 265.0 158 76.6
Lj2A357G77 Lonicera japonica HOM05D006942 ORTHO05D008737 8.1e-69 264.6 149 83.2
Actinidia38618 Actinidia chinensis HOM05D006942 ORTHO05D008737 5.2e-68 261.9 266 54.1
CiPaw.09G001300 Carya illinoinensis HOM05D006942 ORTHO05D008737 6.9e-68 261.5 149 80.5
Sabra13G0052800 Salix brachista HOM05D006942 ORTHO05D008737 2.0e-67 260.0 154 78.6
AUR62032674 Chenopodium quinoa HOM05D006942 ORTHO05D008737 2.4e-65 253.1 170 67.6
Sc13g0007650 Simmondsia chinensis HOM05D006942 ORTHO05D008737 1.0e-63 247.7 156 75.0
Ca_08258_v3 Cicer arietinum L. HOM05D006942 ORTHO05D008737 1.8e-60 236.9 149 73.8
Manes.09G142700 Manihot esculenta HOM05D006942 ORTHO05D008737 2.0e-59 233.4 125 87.2
AUR62032073 Chenopodium quinoa HOM05D006942 ORTHO05D008737 3.5e-56 222.6 164 63.4
Mapoly0043s0076 Marchantia polymorpha HOM05D006942 ORTHO05D008737 2.3e-55 219.9 179 55.3
AagrBONN_evm.TU.Sc2ySwM_344.2088 Anthoceros agrestis HOM05D006942 ORTHO05D008737 3.9e-55 219.2 185 54.1
Nitab4.5_0000911g0030 Nicotiana tabacum HOM05D006942 ORTHO05D008737 6.7e-55 218.4 223 53.4
Pp3c12_13900 Physcomitrium patens HOM05D006942 ORTHO05D008737 1.3e-53 214.2 180 53.9
Pp3c4_7620 Physcomitrium patens HOM05D006942 ORTHO05D008737 1.3e-53 214.2 204 50.5
arahy.Tifrunner.gnm1.ann1.T4HPZA Arachis hypogaea HOM05D006942 ORTHO05D008737 1.2e-51 207.6 185 58.4
Duzib128G0620 Durio zibethinus HOM05D006942 ORTHO05D008737 1.7e-50 203.8 157 64.3
SMO364G0530 Selaginella moellendorffii HOM05D006942 ORTHO05D008737 4.9e-50 202.2 186 50.0
unitig_85.g27430 Utricularia gibba HOM05D006942 ORTHO05D008737 1.0e-47 194.5 138 70.3
Ah.04g153240 Amaranthus hybridus HOM05D000653 ORTHO05D003117 1.1e-46 191.0 176 55.1
Oeu048436.1 Olea europaea HOM05D006942 ORTHO05D008737 2.2e-42 176.8 165 55.2
CBR_g603 Chara braunii HOM05D006942 ORTHO05D008737 7.1e-41 171.8 207 44.4
Hund24842 Selenicereus undatus HOM05D006942 ORTHO05D008737 7.9e-40 168.3 250 40.4
Actinidia17307 Actinidia chinensis HOM05D006942 ORTHO05D008737 2.8e-37 159.8 107 70.1
PRCOL_00006758 Prasinoderma coloniale HOM05D006942 ORTHO05D008737 1.4e-36 157.5 181 48.1
Gohir.A11G258200 Gossypium hirsutum HOM05D006942 ORTHO05D008737 1.8e-36 157.1 254 39.8
Potri.019G033200 Populus trichocarpa HOM05D006942 ORTHO05D008737 9.0e-36 154.8 187 44.4
Cre04.g217903 Chlamydomonas reinhardtii HOM05D006942 ORTHO05D008737 8.5e-34 148.3 177 42.4
SalBow2G1960 Salvia bowleyana HOM05D006942 ORTHO05D008737 2.1e-32 143.7 91 71.4
SEGI_36650 Sequoiadendron giganteum HOM05D006942 ORTHO05D008737 3.3e-22 109.8 69 73.9
Zm00001eb300960 Zea mays HOM05D006942 ORTHO05D008737 2.0e-11 73.9 41 78.0
CSS0026826 Camellia sinensis var. sinensis HOM05D006942 ORTHO05D008737 4.0e-07 59.7 50 56.0
Pp3s30_1160 Physcomitrium patens HOM05D006942 ORTHO05D317230 2.6e-06 57.0 62 35.5


User provided reference genes

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