Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_009638 Daucus carota HOM05D005971 ORTHO05D007459 0.0e+00 1859.0 938 100.0
Dinv19623 Davidia involucrata HOM05D005971 ORTHO05D007459 3.6e-305 1051.6 938 56.8
CSS0033662 Camellia sinensis var. sinensis HOM05D005971 ORTHO05D007459 7.8e-284 980.7 939 53.7
Actinidia35435 Actinidia chinensis HOM05D005971 ORTHO05D007459 1.0e-275 953.7 963 51.1
CSS0049989 Camellia sinensis var. sinensis HOM05D005971 ORTHO05D007459 1.0e-275 953.7 939 52.5
Lj1C905G3 Lonicera japonica HOM05D005971 ORTHO05D007459 9.9e-271 937.2 938 52.3
Potri.001G457550 Populus trichocarpa HOM05D005971 ORTHO05D007459 1.8e-259 899.8 938 49.5
Sabra16G0310100 Salix brachista HOM05D005971 ORTHO05D007459 2.7e-252 875.9 951 48.3
Cfa019419 Carpinus fangiana HOM05D005971 ORTHO05D007459 1.1e-250 870.5 940 49.4
Atru.chr12.2184 Acer truncatum HOM05D005971 ORTHO05D007459 3.3e-250 869.0 936 48.2
QL04p073974 Quercus lobata HOM05D005971 ORTHO05D007459 5.6e-250 868.2 940 48.7
TAR626G0017 Trochodendron aralioides HOM05D005971 ORTHO05D007459 1.3e-249 867.1 949 47.9
Cc05_g16010 Coffea canephora HOM05D005971 ORTHO05D007459 2.8e-249 865.9 939 48.3
Oeu052011.1 Olea europaea HOM05D005971 ORTHO05D007459 2.4e-248 862.8 928 50.1
CAN.G492.69 Capsicum annuum HOM05D005971 ORTHO05D007459 5.5e-245 851.7 968 47.1
Migut.M01561 Erythranthe guttata HOM05D005971 ORTHO05D007459 1.2e-244 850.5 942 48.1
Nitab4.5_0000611g0060 Nicotiana tabacum HOM05D005971 ORTHO05D007459 3.3e-242 842.4 981 47.6
Sopen10g001570 Solanum pennellii HOM05D005971 ORTHO05D007459 4.3e-242 842.0 958 46.8
Ciclev10018677m.g Citrus clementina HOM05D005971 ORTHO05D007459 1.3e-241 840.5 963 46.5
MD05G1219300 Malus domestica HOM05D005971 ORTHO05D007459 8.2e-241 837.8 935 47.5
Peaxi162Scf00267g01016 Petunia axillaris HOM05D005971 ORTHO05D007459 4.5e-239 832.0 970 46.7
RcHm_v2.0_Chr5g0026671 Rosa chinensis HOM05D005971 ORTHO05D007459 1.7e-238 830.1 937 46.5
FAN16G0465 Fragaria x ananassa HOM05D005971 ORTHO05D007459 7.9e-236 821.2 938 46.2
FAN11G3334 Fragaria x ananassa HOM05D005971 ORTHO05D007459 3.0e-235 819.3 938 45.6
FvH4_3g15860 Fragaria vesca HOM05D005971 ORTHO05D007459 3.3e-234 815.8 938 45.3
TWI39G0032 Tripterygium wilfordii HOM05D005971 ORTHO05D007459 8.5e-230 801.2 940 45.4
CANSAT80G2256 Cannabis sativa HOM05D005971 ORTHO05D007459 1.4e-229 800.4 941 45.0
Nitab4.5_0004488g0030 Nicotiana tabacum HOM05D005971 ORTHO05D007459 1.6e-228 797.0 1006 44.8
SGA_v2.0_scaffold7G03577 Striga asiatica HOM05D005971 ORTHO05D007459 6.1e-228 795.0 959 45.9
Duzib268G0338 Durio zibethinus HOM05D005971 ORTHO05D007459 2.6e-223 779.6 942 46.4
ECA240G1928 Erigeron canadensis HOM05D005971 ORTHO05D007459 2.6e-223 779.6 929 46.5
Manes.14G015836 Manihot esculenta HOM05D005971 ORTHO05D007459 1.3e-217 760.8 839 47.4
Gorai.013G178300 Gossypium raimondii HOM05D005971 ORTHO05D007459 2.2e-217 760.0 966 44.5
Phvul.005G056400 Phaseolus vulgaris HOM05D005971 ORTHO05D007459 2.8e-217 759.6 967 44.8
PGR031G0315 Punica granatum HOM05D005971 ORTHO05D007459 2.8e-217 759.6 938 43.2
Lsat_1_v5_gn_7_71401 Lactuca sativa HOM05D005971 ORTHO05D007459 3.7e-217 759.2 956 45.1
Glyma.15G255000 Glycine max HOM05D005971 ORTHO05D007459 3.1e-216 756.1 969 44.1
ClCG11G016380 Citrullus lanatus HOM05D005971 ORTHO05D007459 5.3e-216 755.4 938 42.9
GSVIVG01020430001 Vitis vinifera HOM05D005971 ORTHO05D007459 1.2e-215 754.2 935 43.1
SalBow8G3201 Salvia bowleyana HOM05D005971 ORTHO05D007459 1.6e-215 753.8 985 42.8
Medtr2g069560 Medicago truncatula HOM05D005971 ORTHO05D007459 7.7e-215 751.5 971 43.4
vmacro09786 Vaccinium macrocarpon HOM05D005971 ORTHO05D007459 7.7e-215 751.5 940 45.4
PSO675G3107 Papaver somniferum HOM05D005971 ORTHO05D007459 1.0e-214 751.1 949 43.3
Psat1g011400 Pisum sativum HOM05D005971 ORTHO05D007459 2.5e-213 746.5 942 44.2
Ca_03684_v3 Cicer arietinum L. HOM05D005971 ORTHO05D007459 5.5e-213 745.3 941 43.8
HanXRQChr05g0160991 Helianthus annuus HOM05D005971 ORTHO05D007459 5.5e-213 745.3 965 43.9
arahy.Tifrunner.gnm1.ann1.MUD8D6 Arachis hypogaea HOM05D005971 ORTHO05D007459 3.6e-212 742.7 938 43.6
Atru.chr12.2179 Acer truncatum HOM05D005971 ORTHO05D007459 4.7e-212 742.3 729 51.6
Lalb_Chr25g0285011 Lupinus albus HOM05D005971 ORTHO05D007459 6.1e-212 741.9 964 42.7
PSO017G5934 Papaver somniferum HOM05D005971 ORTHO05D007459 3.0e-211 739.6 948 43.0
THA.LOC104822751 Tarenaya hassleriana HOM05D005971 ORTHO05D007459 8.8e-211 738.0 944 42.9
Ah.06g185720 Amaranthus hybridus HOM05D005971 ORTHO05D007459 2.0e-210 736.9 942 40.6
Solyc10g005600.4 Solanum lycopersicum HOM05D005971 ORTHO05D007459 7.5e-210 734.9 957 43.5
TPR.G9756 Trifolium pratense HOM05D005971 ORTHO05D007459 6.3e-209 731.9 970 42.6
CsaV3_4G031820 Cucumis sativus L. HOM05D005971 ORTHO05D007459 7.7e-207 724.9 965 41.2
Lj3g0007743 Lotus japonicus HOM05D005971 ORTHO05D007459 1.3e-206 724.2 967 42.9
Rhsim04G0005800 Rhododendron simsii HOM05D005971 ORTHO05D007459 1.7e-206 723.8 1086 40.9
Hma1.2p1_0637F.1_g193590 Hydrangea macrophylla HOM05D005971 ORTHO05D007459 1.9e-205 720.3 975 44.0
Sed0013026 Sechium edule HOM05D005971 ORTHO05D007459 3.2e-205 719.5 915 41.6
AT1G04390 Arabidopsis thaliana HOM05D005971 ORTHO05D007459 5.5e-205 718.8 938 40.6
Aa31LG1G20480 Aethionema arabicum HOM05D005971 ORTHO05D007459 3.6e-204 716.1 939 40.1
AL1G14000 Arabidopsis lyrata HOM05D005971 ORTHO05D007459 6.1e-204 715.3 939 40.9
EL10Ac2g03354 Beta vulgaris HOM05D005971 ORTHO05D007459 1.4e-203 714.1 940 41.1
Prupe.4G140600 Prunus persica HOM05D005971 ORTHO05D007459 2.3e-203 713.4 912 43.3
Carub.0001s0356 Capsella rubella HOM05D005971 ORTHO05D007459 8.3e-201 704.9 939 40.6
A10p02830 Brassica napus HOM05D005971 ORTHO05D007459 3.5e-199 699.5 938 40.4
BolC5t29039H Brassica oleracea HOM05D005971 ORTHO05D007459 1.0e-198 698.0 938 39.7
C05p02580 Brassica napus HOM05D005971 ORTHO05D007459 3.2e-197 693.0 938 39.7
Aqoxy2G04113 Aquilegia oxysepala HOM05D005971 ORTHO05D007459 1.2e-191 674.5 952 41.9
GSVIVG01020427001 Vitis vinifera HOM05D005971 ORTHO05D007459 2.3e-187 660.2 935 40.0
Sc06g0001560 Simmondsia chinensis HOM05D005971 ORTHO05D007459 1.7e-182 644.0 723 46.6
Eucgr.F03182 Eucalyptus grandis HOM05D005971 ORTHO05D007459 8.9e-179 631.7 726 45.2
MBI02_g40085_MAGBIO Magnolia biondii HOM05D005971 ORTHO05D007459 6.2e-172 609.0 859 40.4
CARHR003720 Cardamine hirsuta HOM05D005971 ORTHO05D007459 2.9e-169 600.1 719 43.1
Sp1g03210 Schrenkiella parvula HOM05D005971 ORTHO05D007459 3.5e-167 593.2 715 41.8
PGSC0003DMG402011239 Solanum tuberosum HOM05D005971 ORTHO05D007459 1.8e-163 580.9 580 51.6
FAN21G1476 Fragaria x ananassa HOM05D005971 ORTHO05D007459 8.9e-163 578.6 939 36.6
BraA10t42550Z Brassica rapa HOM05D005971 ORTHO05D007459 1.2e-162 578.2 938 36.0
Hund12466 Selenicereus undatus HOM05D005971 ORTHO05D007459 1.3e-161 574.7 812 39.2
AUR62038398 Chenopodium quinoa HOM05D005971 ORTHO05D007459 3.0e-158 563.5 939 36.0
Nn7g37820 Nelumbo nucifera HOM05D005971 ORTHO05D007459 2.2e-153 547.4 750 41.7
Thecc.07G154200 Theobroma cacao HOM05D005971 ORTHO05D007459 2.1e-151 540.8 743 42.0
Thhalv10006788m.g Eutrema salsugineum HOM05D005971 ORTHO05D007459 2.7e-151 540.4 940 34.8
VMungo1080G0173 Vigna mungo HOM05D005971 ORTHO05D007459 6.0e-143 512.7 766 40.6
Gohir.D13G157500 Gossypium hirsutum HOM05D005971 ORTHO05D007459 1.9e-141 507.7 578 47.2
MELO3C010564.2 Cucumis melo HOM05D005971 ORTHO05D007459 9.0e-139 498.8 919 34.1
Cpa.g.sc10.37 Carica papaya HOM05D005971 ORTHO05D007459 1.0e-126 458.8 690 39.6
Gohir.A13G153066 Gossypium hirsutum HOM05D005971 ORTHO05D007459 1.9e-120 438.0 422 51.9
ATR0165G004 Amborella trichopoda HOM05D005971 ORTHO05D007459 1.4e-118 431.8 963 31.0
CDE12G0091 Ceratophyllum demersum HOM05D005971 ORTHO05D007459 1.2e-93 349.0 749 32.3
Zm00001eb273960 Zea mays HOM05D005971 ORTHO05D007459 2.9e-89 334.3 824 30.2
unitig_26.g10082 Utricularia gibba HOM05D005971 ORTHO05D007459 1.8e-83 315.1 954 27.5
PGSC0003DMG401011239 Solanum tuberosum HOM05D005971 ORTHO05D007459 9.5e-72 276.2 389 40.4
Mapoly0060s0028 Marchantia polymorpha HOM05D005971 ORTHO05D007459 8.3e-68 263.1 989 26.4
Cpa.g.sc10.38 Carica papaya HOM05D005971 ORTHO05D007459 4.6e-66 257.3 192 57.8
Nn7g37821 Nelumbo nucifera HOM05D005971 ORTHO05D007459 2.3e-62 245.0 195 56.9
HPP92_026348 Vanilla planifolia HOM05D005971 ORTHO05D007459 6.0e-58 230.3 311 37.0
Peaxi162Scf01123g00003 Petunia axillaris HOM05D005971 ORTHO05D007459 5.1e-57 227.3 440 35.2
Pp3c6_21780 Physcomitrium patens HOM05D005971 ORTHO05D007459 1.3e-52 212.6 993 23.2
FAN25G3291 Fragaria x ananassa HOM05D005971 ORTHO05D007459 4.6e-50 204.1 331 35.3
Haze_08564 Corylus avellana HOM05D005971 ORTHO05D000006 1.0e-49 203.0 140 69.3
Gohir.A13G153099 Gossypium hirsutum HOM05D005971 ORTHO05D007459 8.6e-49 199.9 438 35.2
Peaxi162Scf01123g00008 Petunia axillaris HOM05D005971 ORTHO05D007459 6.4e-44 183.7 230 41.3
VMungo1080G1570 Vigna mungo HOM05D005971 ORTHO05D007459 1.9e-40 172.2 140 55.7
Peaxi162Scf00095g00013 Petunia axillaris HOM05D005971 ORTHO05D007459 3.6e-39 167.9 198 48.0
arahy.Tifrunner.gnm1.ann1.Q40ZT9 Arachis hypogaea HOM05D005971 ORTHO05D007459 8.1e-39 166.8 142 52.1
HPP92_026349 Vanilla planifolia HOM05D005971 ORTHO05D007459 1.9e-32 145.6 445 31.0
CARHR003730 Cardamine hirsuta HOM05D005971 ORTHO05D007459 1.8e-30 139.0 176 39.8
GSVIVG01020425001 Vitis vinifera HOM05D005971 ORTHO05D007459 1.8e-30 139.0 148 44.6
COL.COLO4_20820 Corchorus olitorius HOM05D005971 ORTHO05D007459 3.8e-28 131.3 111 54.1
Atru.chr12.2180 Acer truncatum HOM05D005971 ORTHO05D007459 1.9e-27 129.0 161 41.0
Os06g0674800 Oryza sativa ssp. japonica HOM05D005971 ORTHO05D007459 6.0e-26 124.0 367 26.2
Gohir.D13G157600 Gossypium hirsutum HOM05D005971 ORTHO05D007459 1.0e-25 123.2 148 41.9
Glyma.13G358366 Glycine max HOM05D005971 ORTHO05D007459 3.0e-25 121.7 150 44.7
Zm00001eb395680 Zea mays HOM05D005971 ORTHO05D007459 2.5e-24 118.6 256 32.0
Glyma.13G098800 Glycine max HOM05D005971 ORTHO05D007459 5.6e-24 117.5 150 44.0
GSVIVG01020426001 Vitis vinifera HOM05D005971 ORTHO05D007459 2.4e-22 112.1 176 34.7
Glyma.08G171633 Glycine max HOM05D005971 ORTHO05D007459 3.1e-22 111.7 91 53.8
C03p00610 Brassica napus HOM05D005971 ORTHO05D040551 4.5e-21 107.8 159 35.8
CDE12G0613 Ceratophyllum demersum HOM05D005971 ORTHO05D007459 1.4e-14 86.3 100 39.0
Glyma.13G358300 Glycine max HOM05D005971 ORTHO05D007459 1.4e-14 86.3 185 34.1
BolC3t12626H Brassica oleracea HOM05D005971 ORTHO05D040551 3.8e-12 78.2 155 29.7
CAN.G1199.4 Capsicum annuum HOM05D002053 ORTHO05D007459 1.2e-10 73.2 47 68.1
Sed0015221 Sechium edule HOM05D006313 ORTHO05D007853 2.2e-07 62.4 162 28.4
MELO3C017021.2 Cucumis melo HOM05D006313 ORTHO05D007853 9.0e-06 57.0 162 26.5


User provided reference genes

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