Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_009636 Daucus carota HOM05D007146 ORTHO05D008971 0.0e+00 1137.1 570 100.0
CSS0033590 Camellia sinensis var. sinensis HOM05D007146 ORTHO05D008971 1.7e-204 716.5 594 64.3
CSS0042492 Camellia sinensis var. sinensis HOM05D007146 ORTHO05D008971 5.0e-201 704.9 574 65.2
vmacro11655 Vaccinium macrocarpon HOM05D007146 ORTHO05D008971 2.1e-191 672.9 619 59.8
Rhsim06G0237700 Rhododendron simsii HOM05D007146 ORTHO05D008971 5.2e-190 668.3 606 60.6
GSVIVG01020477001 Vitis vinifera HOM05D007146 ORTHO05D008971 1.7e-188 663.3 566 59.7
FvH4_3g16020 Fragaria vesca HOM05D007146 ORTHO05D008971 1.0e-185 654.1 569 59.6
CiPaw.11G069000 Carya illinoinensis HOM05D007146 ORTHO05D008971 6.6e-185 651.4 565 60.5
FAN11G2635 Fragaria x ananassa HOM05D007146 ORTHO05D008971 1.1e-184 650.6 569 59.4
Nn7g37748 Nelumbo nucifera HOM05D007146 ORTHO05D008971 8.1e-183 644.4 576 59.2
RcHm_v2.0_Chr5g0027001 Rosa chinensis HOM05D007146 ORTHO05D008971 1.2e-181 640.6 570 58.6
MD05G1215600 Malus domestica HOM05D007146 ORTHO05D008971 2.9e-180 636.0 567 58.7
Cc05_g15970 Coffea canephora HOM05D007146 ORTHO05D008971 8.3e-180 634.4 566 58.1
Prupe.4G143400 Prunus persica HOM05D007146 ORTHO05D008971 8.3e-180 634.4 566 58.8
Eucgr.F01450 Eucalyptus grandis HOM05D007146 ORTHO05D008971 2.3e-177 626.3 569 57.6
Oeu002808.1 Olea europaea HOM05D007146 ORTHO05D008971 2.3e-177 626.3 665 51.3
COL.COLO4_05069 Corchorus olitorius HOM05D007146 ORTHO05D008971 1.1e-176 624.0 573 58.3
TWI38G0129 Tripterygium wilfordii HOM05D007146 ORTHO05D008971 5.6e-176 621.7 585 56.8
Potri.007G065300 Populus trichocarpa HOM05D007146 ORTHO05D008971 1.2e-175 620.5 567 57.0
SalBow8G2846 Salvia bowleyana HOM05D007146 ORTHO05D008971 1.6e-175 620.2 573 57.1
Lj3g0000430 Lotus japonicus HOM05D007146 ORTHO05D008971 8.1e-175 617.8 568 58.1
Aqoxy4G00043_Aqoxy4G00044 Aquilegia oxysepala HOM05D007146 ORTHO05D008971 1.4e-174 617.1 581 55.8
Phvul.005G055600 Phaseolus vulgaris HOM05D007146 ORTHO05D008971 1.8e-174 616.7 570 56.1
PGR083G2275 Punica granatum HOM05D007146 ORTHO05D008971 8.9e-174 614.4 568 57.6
Atru.chr2.1879 Acer truncatum HOM05D007146 ORTHO05D008971 1.5e-173 613.6 570 55.6
THA.LOC104812351 Tarenaya hassleriana HOM05D007146 ORTHO05D008971 1.5e-173 613.6 565 56.5
Gorai.004G269700 Gossypium raimondii HOM05D007146 ORTHO05D008971 4.4e-173 612.1 565 56.8
Solyc07g066340.3 Solanum lycopersicum HOM05D007146 ORTHO05D008971 4.4e-173 612.1 577 56.7
TPR.G9764 Trifolium pratense HOM05D007146 ORTHO05D008971 7.6e-173 611.3 571 55.9
Sabra07G0052900 Salix brachista HOM05D007146 ORTHO05D008971 1.3e-172 610.5 568 56.3
Sopen07g034520 Solanum pennellii HOM05D007146 ORTHO05D008971 1.7e-172 610.1 574 56.8
Lalb_Chr25g0285151 Lupinus albus HOM05D007146 ORTHO05D008971 2.9e-172 609.4 566 55.5
Glyma.08G173200 Glycine max HOM05D007146 ORTHO05D008971 3.7e-172 609.0 567 55.7
CAN.G943.29 Capsicum annuum HOM05D007146 ORTHO05D008971 6.4e-172 608.2 566 56.4
SGA_v2.0_scaffold186G40227 Striga asiatica HOM05D007146 ORTHO05D008971 6.4e-172 608.2 570 55.3
AT1G16650 Arabidopsis thaliana HOM05D007146 ORTHO05D008971 1.9e-171 606.7 567 56.3
Peaxi162Scf00232g01133 Petunia axillaris HOM05D007146 ORTHO05D008971 2.4e-171 606.3 568 56.5
PGSC0003DMG401022133 Solanum tuberosum HOM05D007146 ORTHO05D008971 9.2e-171 604.4 566 56.7
PSO675G2245 Papaver somniferum HOM05D007146 ORTHO05D008971 4.6e-170 602.1 589 54.2
FAN25G2803 Fragaria x ananassa HOM05D007146 ORTHO05D008971 2.3e-169 599.7 543 57.5
AL1G28820 Arabidopsis lyrata HOM05D007146 ORTHO05D008971 5.1e-169 598.6 571 55.7
Thhalv10007372m.g Eutrema salsugineum HOM05D007146 ORTHO05D008971 5.1e-169 598.6 572 56.1
Medtr2g064450 Medicago truncatula HOM05D007146 ORTHO05D008971 1.5e-168 597.0 570 55.8
ClCG11G016310 Citrullus lanatus HOM05D007146 ORTHO05D008971 9.6e-168 594.3 581 55.2
BolC5t30209H Brassica oleracea HOM05D007146 ORTHO05D008971 1.2e-167 594.0 572 55.2
A06p12640 Brassica napus HOM05D007146 ORTHO05D008971 4.7e-167 592.0 570 54.9
C05p14940 Brassica napus HOM05D007146 ORTHO05D008971 6.2e-167 591.7 571 54.8
Carub.0001s1639 Capsella rubella HOM05D007146 ORTHO05D008971 1.1e-166 590.9 571 55.3
CsaV3_2G022170 Cucumis sativus L. HOM05D007146 ORTHO05D008971 2.4e-166 589.7 565 54.9
HanXRQChr05g0160631 Helianthus annuus HOM05D007146 ORTHO05D008971 4.0e-166 589.0 566 55.1
Aa31LG7G1140 Aethionema arabicum HOM05D007146 ORTHO05D008971 5.2e-166 588.6 566 54.6
BcaC05g25529 Brassica carinata HOM05D007146 ORTHO05D008971 5.2e-166 588.6 579 54.7
PSO541G2405 Papaver somniferum HOM05D007146 ORTHO05D008971 1.5e-165 587.0 575 54.8
Sed0009835 Sechium edule HOM05D007146 ORTHO05D008971 4.4e-165 585.5 575 55.0
HPP92_018693 Vanilla planifolia HOM05D007146 ORTHO05D008971 1.6e-162 577.0 574 52.6
BraA06t24425Z Brassica rapa HOM05D007146 ORTHO05D008971 1.3e-161 573.9 590 52.4
arahy.Tifrunner.gnm1.ann1.L14HV7 Arachis hypogaea HOM05D007146 ORTHO05D008971 1.9e-160 570.1 619 50.9
arahy.Tifrunner.gnm1.ann1.5W7G8A Arachis hypogaea HOM05D007146 ORTHO05D008971 5.3e-158 562.0 619 50.6
Manes.03G082700 Manihot esculenta HOM05D007146 ORTHO05D008971 7.6e-157 558.1 568 53.9
ATR1098G072 Amborella trichopoda HOM05D007146 ORTHO05D008971 1.1e-155 554.3 577 51.6
EL10Ac4g08556 Beta vulgaris HOM05D007146 ORTHO05D008971 3.9e-153 545.8 534 55.1
Lsat_1_v5_gn_9_46800 Lactuca sativa HOM05D007146 ORTHO05D008971 1.5e-152 543.9 594 51.3
FAN21G1125 Fragaria x ananassa HOM05D007146 ORTHO05D008971 1.6e-151 540.4 510 55.9
Os12g0610500 Oryza sativa ssp. japonica HOM05D007146 ORTHO05D008971 2.1e-151 540.0 573 49.7
MBI02_g25677_MAGBIO Magnolia biondii HOM05D007146 ORTHO05D008971 1.3e-148 530.8 520 54.4
HPP92_018676 Vanilla planifolia HOM05D007146 ORTHO05D008971 8.4e-148 528.1 531 52.5
Gohir.D08G252900 Gossypium hirsutum HOM05D007146 ORTHO05D008971 1.3e-145 520.8 507 54.6
VMungo1080G0158 Vigna mungo HOM05D007146 ORTHO05D008971 1.8e-145 520.4 510 53.9
Duzib213G0540 Durio zibethinus HOM05D007146 ORTHO05D008971 1.2e-141 507.7 533 53.1
Psat1g002520 Pisum sativum HOM05D007146 ORTHO05D008971 2.5e-139 500.0 410 62.2
MELO3C010557.2 Cucumis melo HOM05D007146 ORTHO05D008971 1.6e-138 497.3 579 48.9
Zm00001eb135900 Zea mays HOM05D007146 ORTHO05D008971 1.1e-136 491.1 519 50.1
Nitab4.5_0002933g0010 Nicotiana tabacum HOM05D007146 ORTHO05D008971 9.6e-136 488.0 566 49.1
Nitab4.5_0000313g0010 Nicotiana tabacum HOM05D007146 ORTHO05D008971 5.7e-128 462.2 368 63.9
unitig_749.g13702 Utricularia gibba HOM05D007146 ORTHO05D008971 2.3e-121 440.3 594 44.3
Gohir.A08G232700 Gossypium hirsutum HOM05D007146 ORTHO05D008971 2.0e-120 437.2 505 47.9
Migut.M01565 Erythranthe guttata HOM05D007146 ORTHO05D008971 6.7e-113 412.1 348 59.2
Pp3c14_6050 Physcomitrium patens HOM05D007146 ORTHO05D008971 1.3e-111 407.9 567 41.6
Ah.06g187050 Amaranthus hybridus HOM05D007146 ORTHO05D008971 2.2e-111 407.1 439 49.7
SMO143G0033 Selaginella moellendorffii HOM05D007146 ORTHO05D008971 3.1e-110 403.3 563 40.5
Lj8C186T10 Lonicera japonica HOM05D007146 ORTHO05D008971 7.5e-104 382.1 389 56.6
Pp3c1_21800 Physcomitrium patens HOM05D007146 ORTHO05D008971 1.7e-103 380.9 612 38.7
TAR627G0841 Trochodendron aralioides HOM05D007146 ORTHO05D008971 7.7e-101 372.1 414 54.1
Ciclev10021587m.g Citrus clementina HOM05D007146 ORTHO05D008971 1.6e-93 347.8 281 62.6
MSTRG.16117 Avicennia marina HOM05D007146 ORTHO05D008971 2.0e-93 347.4 286 62.6
Thecc.07G156000 Theobroma cacao HOM05D007146 ORTHO05D008971 5.2e-89 332.8 280 61.4
Sp1g14790 Schrenkiella parvula HOM05D007146 ORTHO05D008971 1.5e-88 331.3 373 50.9
DCAR_002379 Daucus carota HOM05D007146 ORTHO05D008971 2.2e-87 327.4 228 76.8
AagrBONN_evm.TU.Sc2ySwM_368.537 Anthoceros agrestis HOM05D007146 ORTHO05D008971 9.5e-83 312.0 457 40.5
AUR62041925 Chenopodium quinoa HOM05D007146 ORTHO05D008971 1.6e-77 294.7 288 55.6
CDE03G0452 Ceratophyllum demersum HOM05D007146 ORTHO05D008971 1.8e-73 281.2 450 40.7
Ca_03693_v3 Cicer arietinum L. HOM05D007146 ORTHO05D008971 6.6e-68 262.7 195 64.6
Thecc.07G156300 Theobroma cacao HOM05D007146 ORTHO05D008971 4.4e-64 250.0 249 53.8
Ciclev10022203m.g Citrus clementina HOM05D007146 ORTHO05D008971 4.9e-55 219.9 217 54.4
SEGI_13316 Sequoiadendron giganteum HOM05D007146 ORTHO05D008971 1.0e-52 212.2 239 52.3
CARHR017120 Cardamine hirsuta HOM05D007146 ORTHO05D008971 2.7e-45 187.6 170 60.0
Ca_03695_v3 Cicer arietinum L. HOM05D007146 ORTHO05D008971 5.6e-43 179.9 204 47.1
Ca_03700_v3 Cicer arietinum L. HOM05D007146 ORTHO05D008971 5.6e-43 179.9 204 47.1
Hund10273 Selenicereus undatus HOM05D007146 ORTHO05D008971 2.8e-42 177.6 124 66.1
Cpa.g.sc10.33 Carica papaya HOM05D007146 ORTHO05D008971 1.1e-35 155.6 96 74.0
Cpa.g.sc10.30 Carica papaya HOM05D007146 ORTHO05D008971 1.5e-35 155.2 195 49.2
Ah.06g187020 Amaranthus hybridus HOM05D007146 ORTHO05D008971 2.1e-34 151.4 198 45.5
CDE03G0405 Ceratophyllum demersum HOM05D007146 ORTHO05D008971 8.1e-34 149.4 117 53.8
Sc07g0003080 Simmondsia chinensis HOM05D007146 ORTHO05D008971 6.9e-33 146.4 111 65.8
Hund10306 Selenicereus undatus HOM05D007146 ORTHO05D008971 8.7e-28 129.4 135 52.6
Haze_08528 Corylus avellana HOM05D007146 ORTHO05D008971 9.0e-17 92.8 139 41.0
MBI02_g40068_MAGBIO Magnolia biondii HOM05D007146 ORTHO05D008971 1.4e-14 85.5 148 37.2
SMO246G0022 Selaginella moellendorffii HOM05D007146 ORTHO05D008971 2.3e-12 78.2 90 48.9
Cfa023972 Carpinus fangiana HOM05D007146 ORTHO05D008971 1.1e-11 75.9 388 23.2
FAN16G0561 Fragaria x ananassa HOM05D007146 ORTHO05D008971 9.4e-06 56.2 47 57.4


User provided reference genes

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