Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_009594 Daucus carota HOM05D006319 ORTHO05D007963 1.7e-97 359.8 242 100.0
Hma1.2p1_0236F.1_g099250 Hydrangea macrophylla HOM05D006319 ORTHO05D007963 5.1e-70 268.5 201 71.1
Dinv05221 Davidia involucrata HOM05D006319 ORTHO05D007963 1.1e-69 267.3 161 83.9
Lj7A582T32 Lonicera japonica HOM05D006319 ORTHO05D007963 2.5e-69 266.2 158 84.2
Potri.007G100800 Populus trichocarpa HOM05D006319 ORTHO05D007963 1.3e-68 263.8 193 69.4
Atru.chr4.1000 Acer truncatum HOM05D006319 ORTHO05D007963 6.2e-68 261.5 161 80.7
COL.COLO4_35821 Corchorus olitorius HOM05D006319 ORTHO05D007963 6.2e-68 261.5 157 82.8
Thecc.01G138200 Theobroma cacao HOM05D006319 ORTHO05D007963 6.2e-68 261.5 161 81.4
Ciclev10002322m.g Citrus clementina HOM05D006319 ORTHO05D007963 8.1e-68 261.2 161 81.4
Duzib187G0662 Durio zibethinus HOM05D006319 ORTHO05D007963 2.4e-67 259.6 161 81.4
CSS0021790 Camellia sinensis var. sinensis HOM05D006319 ORTHO05D007963 6.9e-67 258.1 161 79.5
Nn1g08971 Nelumbo nucifera HOM05D006319 ORTHO05D007963 9.0e-67 257.7 159 79.2
TWI31G0926 Tripterygium wilfordii HOM05D006319 ORTHO05D007963 1.5e-66 256.9 161 78.9
Eucgr.H05122 Eucalyptus grandis HOM05D006319 ORTHO05D007963 2.6e-66 256.1 161 79.5
Actinidia16521 Actinidia chinensis HOM05D006319 ORTHO05D007963 3.4e-66 255.8 161 80.1
Hund07232 Selenicereus undatus HOM05D006319 ORTHO05D007963 3.4e-66 255.8 161 79.5
Prupe.4G276300 Prunus persica HOM05D006319 ORTHO05D007963 4.5e-66 255.4 161 79.5
PGR102G0633 Punica granatum HOM05D006319 ORTHO05D007963 4.5e-66 255.4 161 80.1
QL10p041175 Quercus lobata HOM05D006319 ORTHO05D007963 4.5e-66 255.4 194 68.0
ClCG02G000280 Citrullus lanatus HOM05D005757 ORTHO05D007090 7.6e-66 254.6 158 78.5
GSVIVG01022331001 Vitis vinifera HOM05D006319 ORTHO05D007963 7.6e-66 254.6 194 69.6
MELO3C023216.2 Cucumis melo HOM05D006319 ORTHO05D007963 1.0e-65 254.2 158 79.1
CsaV3_2G019570 Cucumis sativus L. HOM05D006319 ORTHO05D007963 1.0e-65 254.2 158 79.1
Gorai.011G118400 Gossypium raimondii HOM05D006319 ORTHO05D007963 1.0e-65 254.2 161 79.5
CiPaw.04G079200 Carya illinoinensis HOM05D006319 ORTHO05D007963 2.9e-65 252.7 161 78.3
Manes.12G159300 Manihot esculenta HOM05D006319 ORTHO05D007963 2.9e-65 252.7 191 67.5
Aqoxy6G00315 Aquilegia oxysepala HOM05D006319 ORTHO05D007963 4.9e-65 251.9 157 79.6
CANSAT01G1475 Cannabis sativa HOM05D006319 ORTHO05D007963 4.9e-65 251.9 162 78.4
Lalb_Chr08g0238171 Lupinus albus HOM05D006319 ORTHO05D007963 1.1e-64 250.8 157 76.4
QL10p041464 Quercus lobata HOM05D006319 ORTHO05D007963 2.5e-64 249.6 160 76.9
TAR628G0979 Trochodendron aralioides HOM05D006319 ORTHO05D007963 2.5e-64 249.6 195 67.2
AUR62000524 Chenopodium quinoa HOM05D006319 ORTHO05D007963 5.5e-64 248.4 161 78.3
RcHm_v2.0_Chr2g0122611 Rosa chinensis HOM05D006319 ORTHO05D007963 7.1e-64 248.1 155 79.4
MD01G1000300 Malus domestica HOM05D006319 ORTHO05D007963 1.2e-63 247.3 161 76.4
VMungo0464G0362 Vigna mungo HOM05D006319 ORTHO05D007963 1.6e-63 246.9 157 77.1
AUR62006869 Chenopodium quinoa HOM05D006319 ORTHO05D007963 3.5e-63 245.7 161 77.6
Glyma.06G156100 Glycine max HOM05D006319 ORTHO05D007963 3.5e-63 245.7 157 76.4
Medtr3g096750 Medicago truncatula HOM05D006319 ORTHO05D007963 4.6e-63 245.4 156 75.0
Nitab4.5_0013462g0010 Nicotiana tabacum HOM05D006319 ORTHO05D007963 6.0e-63 245.0 161 76.4
Carub.0004s0957 Capsella rubella HOM05D006319 ORTHO05D007963 7.9e-63 244.6 160 73.8
vmacro18688 Vaccinium macrocarpon HOM05D006319 ORTHO05D007963 1.0e-62 244.2 193 65.8
Lj1g0009956 Lotus japonicus HOM05D006319 ORTHO05D007963 1.3e-62 243.8 157 75.8
Migut.H00824 Erythranthe guttata HOM05D006319 ORTHO05D007963 2.3e-62 243.0 161 73.3
Nitab4.5_0004105g0090 Nicotiana tabacum HOM05D006319 ORTHO05D007963 2.3e-62 243.0 161 75.8
Aa31LG5G7620 Aethionema arabicum HOM05D005759 ORTHO05D007172 5.1e-62 241.9 161 73.9
Phvul.009G154200 Phaseolus vulgaris HOM05D006319 ORTHO05D007963 5.1e-62 241.9 157 75.8
Sopen04g004550 Solanum pennellii HOM05D006319 ORTHO05D007963 6.7e-62 241.5 161 75.8
PGSC0003DMG400032538 Solanum tuberosum HOM05D006319 ORTHO05D007963 6.7e-62 241.5 161 75.8
AT2G28605 Arabidopsis thaliana HOM05D006319 ORTHO05D007963 8.7e-62 241.1 162 74.1
MSTRG.23490 Avicennia marina HOM05D006319 ORTHO05D007963 8.7e-62 241.1 161 73.9
Cpa.g.sc37.12 Carica papaya HOM05D006319 ORTHO05D007963 8.7e-62 241.1 173 71.7
Solyc04g009420.3 Solanum lycopersicum HOM05D006319 ORTHO05D007963 1.1e-61 240.7 161 75.2
AL4G23100 Arabidopsis lyrata HOM05D006319 ORTHO05D007963 1.5e-61 240.4 162 73.5
arahy.Tifrunner.gnm1.ann1.7TU5G5 Arachis hypogaea HOM05D006319 ORTHO05D007963 1.5e-61 240.4 157 73.2
Psat5g060360 Pisum sativum HOM05D006319 ORTHO05D007963 1.5e-61 240.4 157 74.5
CAN.G186.2 Capsicum annuum HOM05D006319 ORTHO05D007963 1.9e-61 240.0 158 75.3
THA.LOC104826346 Tarenaya hassleriana HOM05D006319 ORTHO05D007963 1.9e-61 240.0 161 72.7
FAN23G2801 Fragaria x ananassa HOM05D006319 ORTHO05D007963 4.3e-61 238.8 155 77.4
arahy.Tifrunner.gnm1.ann1.P5PFFU Arachis hypogaea HOM05D006319 ORTHO05D007963 5.7e-61 238.4 157 73.2
Cc02_g33910 Coffea canephora HOM05D006319 ORTHO05D007963 5.7e-61 238.4 198 64.6
Sc02g0003550 Simmondsia chinensis HOM05D006319 ORTHO05D007963 5.7e-61 238.4 160 74.4
arahy.Tifrunner.gnm1.ann1.4SM61H Arachis hypogaea HOM05D006319 ORTHO05D007963 9.6e-61 237.7 157 73.2
arahy.Tifrunner.gnm1.ann1.B4AV5R Arachis hypogaea HOM05D006319 ORTHO05D007963 9.6e-61 237.7 157 73.2
FvH4_1g24980 Fragaria vesca HOM05D006319 ORTHO05D007963 9.6e-61 237.7 155 76.8
Ah.06g191080 Amaranthus hybridus HOM05D006319 ORTHO05D007963 1.6e-60 236.9 168 73.8
CARHR121630 Cardamine hirsuta HOM05D006319 ORTHO05D007963 2.8e-60 236.1 161 72.0
Glyma.04G209900 Glycine max HOM05D006319 ORTHO05D007963 6.2e-60 235.0 157 73.9
BcaB01g03112 Brassica carinata HOM05D006319 ORTHO05D007963 8.2e-60 234.6 161 70.8
Thhalv10017176m.g Eutrema salsugineum HOM05D006319 ORTHO05D007963 8.2e-60 234.6 162 71.0
BcaB06g28232 Brassica carinata HOM05D006319 ORTHO05D007963 1.8e-59 233.4 159 71.7
EL10Ac4g09632 Beta vulgaris HOM05D006319 ORTHO05D007963 2.4e-59 233.0 161 72.0
A04p21670 Brassica napus HOM05D006319 ORTHO05D007963 3.1e-59 232.6 160 71.9
SalBow1G4836 Salvia bowleyana HOM05D006319 ORTHO05D007963 3.1e-59 232.6 158 72.8
Sp4g11430 Schrenkiella parvula HOM05D006319 ORTHO05D007963 6.9e-59 231.5 159 73.0
Oeu011026.1 Olea europaea HOM05D006319 ORTHO05D007963 1.2e-58 230.7 161 71.4
BraA04t17731Z Brassica rapa HOM05D006319 ORTHO05D007963 1.5e-58 230.3 160 70.0
PSO782G1065 Papaver somniferum HOM05D006319 ORTHO05D007963 2.0e-58 229.9 157 72.6
BcaC02g08157 Brassica carinata HOM05D006319 ORTHO05D007963 5.8e-58 228.4 160 71.2
C04p57790 Brassica napus HOM05D006319 ORTHO05D007963 5.8e-58 228.4 160 71.2
BolC4t27297H Brassica oleracea HOM05D006319 ORTHO05D007963 7.6e-58 228.0 160 70.6
FAN28G2219 Fragaria x ananassa HOM05D006319 ORTHO05D007963 1.3e-57 227.3 172 69.2
A03p26290 Brassica napus HOM05D006319 ORTHO05D007963 1.7e-57 226.9 161 69.6
FAN19G2853 Fragaria x ananassa HOM05D006319 ORTHO05D007963 1.7e-57 226.9 172 69.2
BcaC01g04984 Brassica carinata HOM05D006319 ORTHO05D007963 2.9e-57 226.1 162 68.5
C03p31420 Brassica napus HOM05D006319 ORTHO05D007963 2.9e-57 226.1 162 68.5
MBI06_g35206_MAGBIO Magnolia biondii HOM05D006319 ORTHO05D007963 8.4e-57 224.6 157 72.6
BraA03t11843Z Brassica rapa HOM05D006319 ORTHO05D007963 1.4e-56 223.8 161 68.9
CDE08G0565 Ceratophyllum demersum HOM05D006319 ORTHO05D007963 1.4e-56 223.8 155 69.7
Eucgr.H02106 Eucalyptus grandis HOM05D006319 ORTHO05D007963 1.9e-56 223.4 152 76.3
BolC3t15489H Brassica oleracea HOM05D006319 ORTHO05D007963 3.2e-56 222.6 162 67.3
SGA_v2.0_scaffold273G46467 Striga asiatica HOM05D006319 ORTHO05D007963 5.5e-56 221.9 161 67.7
Zm00001eb422700 Zea mays HOM05D006319 ORTHO05D007963 7.2e-56 221.5 155 71.0
unitig_899.g15151 Utricularia gibba HOM05D006319 ORTHO05D007963 1.6e-55 220.3 158 67.1
ECA246G1987 Erigeron canadensis HOM05D000001 ORTHO05D000003 1.3e-54 217.2 156 67.9
Peaxi162Scf00842g00214 Petunia axillaris HOM05D006319 ORTHO05D007963 1.5e-53 213.8 140 75.0
HanXRQChr12g0378071 Helianthus annuus HOM05D006319 ORTHO05D007963 2.8e-52 209.5 161 66.5
HPP92_009279 Vanilla planifolia HOM05D006319 ORTHO05D007963 1.4e-51 207.2 154 66.2
ATR0584G200 Amborella trichopoda HOM05D006319 ORTHO05D007963 1.8e-51 206.8 156 69.2
arahy.Tifrunner.gnm1.ann1.E0QW5U Arachis hypogaea HOM05D006319 ORTHO05D007963 2.9e-49 199.5 157 65.0
arahy.Tifrunner.gnm1.ann1.GQG991 Arachis hypogaea HOM05D006319 ORTHO05D007963 6.5e-49 198.4 157 65.0
Rhsim01G0141500 Rhododendron simsii HOM05D006319 ORTHO05D007963 2.3e-46 189.9 185 54.6
Potri.005G068500 Populus trichocarpa HOM05D006319 ORTHO05D007963 8.2e-44 181.4 161 61.5
Lsat_1_v5_gn_5_34560 Lactuca sativa HOM05D006319 ORTHO05D007963 1.1e-43 181.0 156 60.9
SEGI_06099 Sequoiadendron giganteum HOM05D006319 ORTHO05D007963 1.2e-42 177.6 155 57.4
SEGI_37383 Sequoiadendron giganteum HOM05D006319 ORTHO05D007963 1.2e-42 177.6 155 57.4
Pp3c8_18060 Physcomitrium patens HOM05D006319 ORTHO05D007963 1.2e-34 151.0 151 51.0
Gohir.D10G108000 Gossypium hirsutum HOM05D006319 ORTHO05D007963 3.8e-33 146.0 88 80.7
AagrBONN_evm.TU.Sc2ySwM_228.2950 Anthoceros agrestis HOM05D006319 ORTHO05D007963 6.5e-33 145.2 154 49.4
Gohir.A10G068160 Gossypium hirsutum HOM05D006319 ORTHO05D007963 3.2e-32 142.9 88 79.5
Ca_16986_v3 Cicer arietinum L. HOM05D001650 ORTHO05D001592 1.5e-29 134.0 92 71.7
TPR.G10777 Trifolium pratense HOM05D006319 ORTHO05D007963 1.5e-29 134.0 82 78.0
SMO117G0258 Selaginella moellendorffii HOM05D006319 ORTHO05D007963 6.3e-28 128.6 156 42.9
FAN23G0464 Fragaria x ananassa HOM05D006319 ORTHO05D007963 8.2e-28 128.3 81 74.1
CBR_g49982 Chara braunii HOM05D006319 ORTHO05D007963 9.1e-27 124.8 169 42.0
Mapoly0092s0018 Marchantia polymorpha HOM05D006319 ORTHO05D007963 6.5e-25 118.6 151 41.7
FAN26G1803 Fragaria x ananassa HOM05D001650 ORTHO05D001592 1.9e-24 117.1 81 72.8
Cre16.g678851 Chlamydomonas reinhardtii HOM05D006319 ORTHO05D007963 1.6e-23 114.0 159 38.4
arahy.Tifrunner.gnm1.ann1.PNID9I Arachis hypogaea HOM05D006319 ORTHO05D007963 3.0e-22 109.8 74 70.3
TPR.G33590 Trifolium pratense HOM05D001650 ORTHO05D001592 3.0e-22 109.8 74 70.3
arahy.Tifrunner.gnm1.ann1.Q7YENP Arachis hypogaea HOM05D006319 ORTHO05D007963 1.2e-21 107.8 74 68.9
Manes.12G147800 Manihot esculenta HOM05D006319 ORTHO05D007963 1.5e-21 107.5 108 55.6
arahy.Tifrunner.gnm1.ann1.949H7S Arachis hypogaea HOM05D006319 ORTHO05D007963 4.4e-21 105.9 74 68.9
Os04g0434900 Oryza sativa ssp. japonica HOM05D006319 ORTHO05D007963 5.4e-19 99.0 69 69.6
arahy.Tifrunner.gnm1.ann1.RE08FE Arachis hypogaea HOM05D006319 ORTHO05D007963 2.7e-18 96.7 92 57.6
AagrBONN_evm.TU.Sc2ySwM_362.516 Anthoceros agrestis HOM05D005157 ORTHO05D006652 5.0e-17 92.4 91 56.0
arahy.Tifrunner.gnm1.ann1.I50TU7 Arachis hypogaea HOM05D006319 ORTHO05D007963 1.3e-12 77.8 111 41.4
MCO01G211 Micromonas commoda HOM05D006319 ORTHO05D007963 2.8e-12 76.6 128 35.2
CDE08G0611 Ceratophyllum demersum HOM05D006319 ORTHO05D007963 1.6e-10 70.9 50 72.0
PRCOL_00004434 Prasinoderma coloniale HOM05D006319 ORTHO05D007963 3.8e-09 66.2 114 38.6
MBI17_g01556_MAGBIO Magnolia biondii HOM05D006319 ORTHO05D007963 2.8e-07 60.1 48 62.5
MBI11_g02539_MAGBIO Magnolia biondii HOM05D006319 ORTHO05D007963 8.9e-06 55.1 51 60.8


User provided reference genes

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