Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_009586 Daucus carota HOM05D005440 ORTHO05D007314 6.3e-151 537.3 258 100.0
Atru.chr5.954 Acer truncatum HOM05D005440 ORTHO05D007314 2.4e-126 455.7 267 80.5
Gorai.001G092600 Gossypium raimondii HOM05D005440 ORTHO05D007314 7.0e-126 454.1 267 79.4
CAN.G1156.52 Capsicum annuum HOM05D005440 ORTHO05D007314 1.2e-125 453.4 270 79.6
GSVIVG01026115001 Vitis vinifera HOM05D005440 ORTHO05D007314 2.7e-125 452.2 268 79.5
Potri.006G023400 Populus trichocarpa HOM05D005440 ORTHO05D007314 7.7e-125 450.7 264 80.7
Ciclev10011552m.g Citrus clementina HOM05D005440 ORTHO05D007314 1.7e-124 449.5 264 81.1
Glyma.13G003900 Glycine max HOM05D005440 ORTHO05D007314 1.7e-124 449.5 268 78.7
Glyma.20G065600 Glycine max HOM05D005440 ORTHO05D007314 2.2e-124 449.1 268 78.4
Gohir.A07G081000 Gossypium hirsutum HOM05D005440 ORTHO05D007314 2.2e-124 449.1 267 78.7
Peaxi162Scf00525g00411 Petunia axillaris HOM05D005440 ORTHO05D007314 2.2e-124 449.1 270 78.1
Duzib138G1709 Durio zibethinus HOM05D005440 ORTHO05D007314 6.5e-124 447.6 268 78.4
Gohir.D07G086600 Gossypium hirsutum HOM05D005440 ORTHO05D007314 6.5e-124 447.6 272 77.9
HanXRQChr15g0468881 Helianthus annuus HOM05D005440 ORTHO05D007314 6.5e-124 447.6 265 80.4
Ca_16308_v3 Cicer arietinum L. HOM05D005440 ORTHO05D007314 1.1e-123 446.8 266 78.9
Lj6g0026846 Lotus japonicus HOM05D005440 ORTHO05D007314 1.1e-123 446.8 264 78.8
Phvul.006G001800 Phaseolus vulgaris HOM05D005440 ORTHO05D007314 1.5e-123 446.4 264 79.5
Potri.016G021900 Populus trichocarpa HOM05D005440 ORTHO05D007314 1.5e-123 446.4 268 79.1
QL04p060188 Quercus lobata HOM05D005440 ORTHO05D007314 3.2e-123 445.3 245 84.5
Solyc05g056520.4 Solanum lycopersicum HOM05D005440 ORTHO05D007314 3.2e-123 445.3 270 78.1
Sopen05g034920 Solanum pennellii HOM05D005440 ORTHO05D007314 4.2e-123 444.9 270 77.8
DCAR_019996 Daucus carota HOM05D005440 ORTHO05D007314 1.6e-122 443.0 273 78.4
TWI60G0164 Tripterygium wilfordii HOM05D005440 ORTHO05D007314 1.6e-122 443.0 262 79.8
Cc07_g20260 Coffea canephora HOM05D005440 ORTHO05D007314 2.7e-122 442.2 264 78.4
Prupe.3G188100 Prunus persica HOM05D005440 ORTHO05D007314 2.7e-122 442.2 264 78.8
Nn5g27478 Nelumbo nucifera HOM05D005440 ORTHO05D007314 3.6e-122 441.8 264 79.2
TPR.G33572 Trifolium pratense HOM05D005440 ORTHO05D007314 3.6e-122 441.8 268 78.4
ECA233G3205 Erigeron canadensis HOM05D005440 ORTHO05D007314 4.7e-122 441.4 266 78.6
Sed0022130 Sechium edule HOM05D005440 ORTHO05D007314 4.7e-122 441.4 267 77.5
RcHm_v2.0_Chr2g0153881 Rosa chinensis HOM05D005440 ORTHO05D007314 6.1e-122 441.0 264 79.2
MELO3C026396.2 Cucumis melo HOM05D005440 ORTHO05D007314 1.0e-121 440.3 264 78.8
CsaV3_4G032220 Cucumis sativus L. HOM05D005440 ORTHO05D007314 2.3e-121 439.1 264 78.0
Duzib133G0846 Durio zibethinus HOM05D005440 ORTHO05D007314 2.3e-121 439.1 268 76.9
Lalb_Chr24g0402811 Lupinus albus HOM05D005440 ORTHO05D007314 2.3e-121 439.1 271 77.1
MD17G1127100 Malus domestica HOM05D005440 ORTHO05D007314 2.3e-121 439.1 264 79.2
FvH4_6g39770 Fragaria vesca HOM05D005440 ORTHO05D007314 3.0e-121 438.7 275 77.5
Hma1.2p1_1803F.1_g302990 Hydrangea macrophylla HOM05D005440 ORTHO05D007314 3.0e-121 438.7 264 78.8
Lalb_Chr22g0360841 Lupinus albus HOM05D005440 ORTHO05D007314 3.0e-121 438.7 264 78.4
Medtr3g081180 Medicago truncatula HOM05D005440 ORTHO05D007314 4.0e-121 438.3 268 77.6
PGR004G2684 Punica granatum HOM05D005440 ORTHO05D007314 4.0e-121 438.3 262 78.2
CANSAT64G0070 Cannabis sativa HOM05D005440 ORTHO05D007314 6.8e-121 437.6 263 80.2
FAN02G0818 Fragaria x ananassa HOM05D005440 ORTHO05D007314 8.8e-121 437.2 264 79.2
Manes.09G077000 Manihot esculenta HOM05D005440 ORTHO05D007314 1.2e-120 436.8 266 80.1
CiPaw.04G136100 Carya illinoinensis HOM05D005440 ORTHO05D007314 1.5e-120 436.4 264 77.3
Sabra16G0027400 Salix brachista HOM05D005440 ORTHO05D007314 4.4e-120 434.9 266 77.1
Cfa023527 Carpinus fangiana HOM05D005440 ORTHO05D007314 7.5e-120 434.1 268 77.2
MD09G1136900 Malus domestica HOM05D005440 ORTHO05D007314 7.5e-120 434.1 264 77.7
ATR0763G213 Amborella trichopoda HOM05D005440 ORTHO05D007314 9.8e-120 433.7 264 76.9
MSTRG.15262 Avicennia marina HOM05D005440 ORTHO05D007314 9.8e-120 433.7 266 76.7
THA.LOC104826162 Tarenaya hassleriana HOM05D005440 ORTHO05D007314 2.2e-119 432.6 265 77.7
Carub.0004s1349 Capsella rubella HOM05D005440 ORTHO05D007314 2.8e-119 432.2 263 78.3
AL4G27520 Arabidopsis lyrata HOM05D005440 ORTHO05D007314 3.7e-119 431.8 263 78.3
A04p24740 Brassica napus HOM05D005440 ORTHO05D007314 3.7e-119 431.8 263 78.3
CARHR125970 Cardamine hirsuta HOM05D005440 ORTHO05D007314 4.9e-119 431.4 263 78.3
TAR627G1033 Trochodendron aralioides HOM05D005440 ORTHO05D007314 6.3e-119 431.0 264 77.7
FAN14G2598 Fragaria x ananassa HOM05D005440 ORTHO05D007314 1.1e-118 430.3 265 78.5
THA.LOC104800970 Tarenaya hassleriana HOM05D005440 ORTHO05D007314 1.8e-118 429.5 263 77.2
AT2G32170 Arabidopsis thaliana HOM05D005440 ORTHO05D007314 4.1e-118 428.3 263 77.6
C04p61670 Brassica napus HOM05D005440 ORTHO05D007314 4.1e-118 428.3 263 77.6
BcaC02g07946 Brassica carinata HOM05D005440 ORTHO05D007314 9.1e-118 427.2 263 77.6
BolC4t27650H Brassica oleracea HOM05D005440 ORTHO05D007314 9.1e-118 427.2 263 77.6
Eucgr.K01335 Eucalyptus grandis HOM05D005440 ORTHO05D007314 1.2e-117 426.8 266 76.3
Thhalv10017571m.g Eutrema salsugineum HOM05D005440 ORTHO05D007314 3.5e-117 425.2 269 77.0
CSS0043590 Camellia sinensis var. sinensis HOM05D005440 ORTHO05D007314 4.5e-117 424.9 262 77.9
BcaB06g28584 Brassica carinata HOM05D005440 ORTHO05D007314 5.9e-117 424.5 263 77.2
Os05g0511300 Oryza sativa ssp. japonica HOM05D005440 ORTHO05D007314 7.7e-117 424.1 267 75.3
Zm00001eb292540 Zea mays HOM05D005440 ORTHO05D007314 1.3e-116 423.3 267 75.3
Sp4g14550 Schrenkiella parvula HOM05D005440 ORTHO05D007314 1.7e-116 422.9 266 75.6
unitig_32.g10657 Utricularia gibba HOM05D005440 ORTHO05D007314 3.8e-116 421.8 249 77.1
Sc15g0002420 Simmondsia chinensis HOM05D005440 ORTHO05D007314 5.0e-116 421.4 264 76.1
PSO675G6996 Papaver somniferum HOM05D005440 ORTHO05D007314 1.1e-115 420.2 264 76.1
BraA04t17992Z Brassica rapa HOM05D005440 ORTHO05D007314 1.9e-115 419.5 257 76.7
HPP92_001868 Vanilla planifolia HOM05D005440 ORTHO05D007314 2.5e-115 419.1 268 73.9
Aqoxy1G01485 Aquilegia oxysepala HOM05D005440 ORTHO05D007314 9.5e-115 417.2 252 79.0
CDE06G0633 Ceratophyllum demersum HOM05D005440 ORTHO05D007314 3.6e-114 415.2 265 76.2
Migut.L00575 Erythranthe guttata HOM05D005440 ORTHO05D007314 3.6e-114 415.2 250 78.4
AUR62017608 Chenopodium quinoa HOM05D005440 ORTHO05D007314 3.0e-113 412.1 264 76.5
Oeu053137.1 Olea europaea HOM05D005440 ORTHO05D007314 5.2e-113 411.4 228 83.3
SalBow5G0813 Salvia bowleyana HOM05D005440 ORTHO05D007314 6.8e-113 411.0 250 77.2
AUR62015149 Chenopodium quinoa HOM05D005440 ORTHO05D007314 8.9e-113 410.6 264 76.5
EL10Ac9g22859 Beta vulgaris HOM05D005440 ORTHO05D007314 2.2e-111 406.0 264 75.4
TWI60G0012 Tripterygium wilfordii HOM05D005440 ORTHO05D007314 6.3e-111 404.4 262 73.3
SEGI_34757 Sequoiadendron giganteum HOM05D005440 ORTHO05D007314 2.4e-110 402.5 245 74.7
Actinidia12520 Actinidia chinensis HOM05D005440 ORTHO05D007314 3.2e-110 402.1 268 72.8
Rhsim12G0014000 Rhododendron simsii HOM05D005440 ORTHO05D007314 3.2e-110 402.1 236 81.4
AT2G32160 Arabidopsis thaliana HOM05D005440 ORTHO05D007314 7.0e-110 401.0 263 73.4
Sabra16G0024900 Salix brachista HOM05D005440 ORTHO05D007314 1.2e-109 400.2 266 72.2
PSO541G5910 Papaver somniferum HOM05D005440 ORTHO05D007314 4.6e-109 398.3 251 75.7
MBI18_g10015_MAGBIO Magnolia biondii HOM05D005440 ORTHO05D007314 2.5e-107 392.5 265 72.5
Aa31LG5G4880 Aethionema arabicum HOM05D005440 ORTHO05D007314 4.4e-104 381.7 248 74.2
Carub.0004s1348 Capsella rubella HOM05D005440 ORTHO05D007314 7.5e-104 380.9 264 68.6
Pp3c17_14810 Physcomitrium patens HOM05D005440 ORTHO05D007314 7.8e-101 370.9 265 67.2
arahy.Tifrunner.gnm1.ann1.TU4NXX Arachis hypogaea HOM05D005440 ORTHO05D007314 5.0e-100 368.2 253 72.3
AagrBONN_evm.TU.Sc2ySwM_368.3314 Anthoceros agrestis HOM05D005440 ORTHO05D007314 1.5e-99 366.7 269 65.8
vmacro08748 Vaccinium macrocarpon HOM05D005440 ORTHO05D007314 1.6e-98 363.2 264 68.2
Mapoly0014s0077 Marchantia polymorpha HOM05D005440 ORTHO05D007314 3.1e-97 359.0 243 69.5
Potri.016G021400 Populus trichocarpa HOM05D005440 ORTHO05D007314 4.0e-97 358.6 268 65.7
Pp3c1_31970 Physcomitrium patens HOM05D005440 ORTHO05D007314 4.6e-93 345.1 266 63.5
Haze_13637 Corylus avellana HOM05D005440 ORTHO05D007314 5.1e-92 341.7 264 65.2
Nitab4.5_0000496g0020 Nicotiana tabacum HOM05D005440 ORTHO05D007314 4.7e-90 335.1 228 71.5
FAN09G4325 Fragaria x ananassa HOM05D005440 ORTHO05D007314 1.1e-89 334.0 264 63.6
Lsat_1_v5_gn_5_68301 Lactuca sativa HOM05D005440 ORTHO05D007314 3.7e-87 325.5 250 65.2
Sabra06G0017100 Salix brachista HOM05D005440 ORTHO05D007314 3.2e-86 322.4 235 68.1
SMO358G0560 Selaginella moellendorffii HOM05D005440 ORTHO05D007314 4.6e-85 318.5 212 69.8
Cpa.g.sc8.301 Carica papaya HOM05D005440 ORTHO05D007314 4.4e-80 302.0 192 74.0
CBR_g29536 Chara braunii HOM05D000019 ORTHO05D000048 5.8e-80 301.6 244 60.7
FAN05G0095 Fragaria x ananassa HOM05D005440 ORTHO05D007314 9.9e-80 300.8 265 62.3
ClCG11G016720 Citrullus lanatus HOM05D005440 ORTHO05D007314 1.3e-79 300.4 272 57.7
Dinv02983 Davidia involucrata HOM05D005440 ORTHO05D007314 3.2e-78 295.8 675 32.3
CARHR125960 Cardamine hirsuta HOM05D005440 ORTHO05D007314 6.6e-76 288.1 190 70.0
arahy.Tifrunner.gnm1.ann1.Z94T11 Arachis hypogaea HOM05D005440 ORTHO05D007314 1.6e-74 283.5 251 62.5
Thecc.01G171200 Theobroma cacao HOM05D005440 ORTHO05D007314 5.1e-68 261.9 159 77.4
Cre03.g188950 Chlamydomonas reinhardtii HOM05D005440 ORTHO05D007314 2.1e-66 256.5 245 52.2
MCO05G304 Micromonas commoda HOM05D005440 ORTHO05D007314 6.9e-65 251.5 242 51.2
SGA_v2.0_scaffold35G13960 Striga asiatica HOM05D005440 ORTHO05D007314 1.8e-60 236.9 131 82.4
Sabra16G0025200 Salix brachista HOM05D005440 ORTHO05D007314 4.8e-58 228.8 262 47.3
Psat5g108160 Pisum sativum HOM05D005440 ORTHO05D007314 3.1e-57 226.1 126 81.0
PRCOL_00002828 Prasinoderma coloniale HOM05D005440 ORTHO05D007314 2.9e-55 219.5 265 44.2
Psat5g108080 Pisum sativum HOM05D005440 ORTHO05D007314 2.1e-53 213.4 133 77.4
Lj4C830T18 Lonicera japonica HOM05D005440 ORTHO05D007314 3.5e-53 212.6 113 86.7
Atru.ctg1434.11 Acer truncatum HOM05D005440 ORTHO05D007314 4.3e-51 205.7 275 40.0
Cfa026418 Carpinus fangiana HOM05D005440 ORTHO05D007314 3.2e-46 189.5 272 39.3
Ah.01g013380 Amaranthus hybridus HOM05D005440 ORTHO05D007314 7.2e-46 188.3 133 69.2
Aqoxy1G03388 Aquilegia oxysepala HOM05D005440 ORTHO05D007314 5.9e-40 168.7 116 72.4
Sabra16G0027100 Salix brachista HOM05D005440 ORTHO05D007314 2.2e-34 150.2 262 37.0
Nitab4.5_0002704g0030 Nicotiana tabacum HOM05D005440 ORTHO05D007314 5.0e-31 139.0 207 47.3
CARHR125950 Cardamine hirsuta HOM05D005440 ORTHO05D007314 2.7e-29 133.3 93 72.0
Hund08219 Selenicereus undatus HOM05D005440 ORTHO05D007314 5.3e-25 119.0 72 79.2
Lj4A830T38 Lonicera japonica HOM05D005440 ORTHO05D007314 4.5e-24 115.9 76 71.1
RcHm_v2.0_Chr2g0172691 Rosa chinensis HOM05D005440 ORTHO05D007314 1.0e-20 104.8 60 75.0
Hund08218 Selenicereus undatus HOM05D005440 ORTHO05D007314 1.3e-18 97.8 106 50.0
RcHm_v2.0_Chr5g0059521 Rosa chinensis HOM05D005440 ORTHO05D007314 1.4e-12 77.8 41 82.9
CAN.G62.19 Capsicum annuum HOM05D001673 ORTHO05D013418 6.3e-10 68.9 48 68.8
CAN.G93.4 Capsicum annuum HOM05D000541 ORTHO05D000137 1.1e-09 68.2 94 43.6
CAN.G1245.16 Capsicum annuum HOM05D001673 ORTHO05D022156 1.2e-08 64.7 44 70.5
CAN.G80.1 Capsicum annuum HOM05D001673 ORTHO05D022156 1.6e-08 64.3 72 48.6


User provided reference genes

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