Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_009572 Daucus carota HOM05D004197 ORTHO05D004975 2.5e-46 188.3 91 100.0
DCAR_029674 Daucus carota HOM05D004197 ORTHO05D004975 3.6e-45 184.5 91 97.8
RcHm_v2.0_Chr1g0333831 Rosa chinensis HOM05D004197 ORTHO05D004975 5.3e-36 154.1 91 78.0
FvH4_7g06200 Fragaria vesca HOM05D004197 ORTHO05D004975 1.5e-35 152.5 91 78.0
FAN01G1948 Fragaria x ananassa HOM05D004197 ORTHO05D004975 1.5e-35 152.5 91 78.0
FAN06G1493 Fragaria x ananassa HOM05D004197 ORTHO05D004975 1.5e-35 152.5 91 78.0
FAN03G3355 Fragaria x ananassa HOM05D004197 ORTHO05D004975 3.4e-35 151.4 91 76.9
Ah.13g073520 Amaranthus hybridus HOM05D004197 ORTHO05D004975 9.9e-35 149.8 91 80.2
GSVIVG01038138001 Vitis vinifera HOM05D004197 ORTHO05D004975 9.9e-35 149.8 91 76.9
TWI32G1250 Tripterygium wilfordii HOM05D004197 ORTHO05D004975 8.4e-34 146.7 91 76.9
AUR62002389 Chenopodium quinoa HOM05D004197 ORTHO05D004975 1.1e-33 146.4 91 76.9
Ciclev10022904m.g Citrus clementina HOM05D004197 ORTHO05D004975 1.4e-33 146.0 91 76.9
TWI34G1638 Tripterygium wilfordii HOM05D004197 ORTHO05D004975 1.4e-33 146.0 91 78.0
AUR62023799 Chenopodium quinoa HOM05D004197 ORTHO05D004975 1.9e-33 145.6 91 76.9
Gohir.A10G143100 Gossypium hirsutum HOM05D004197 ORTHO05D004975 1.9e-33 145.6 91 75.8
Gorai.011G136700 Gossypium raimondii HOM05D004197 ORTHO05D004975 1.9e-33 145.6 91 75.8
Gorai.012G053000 Gossypium raimondii HOM05D004197 ORTHO05D004975 1.9e-33 145.6 91 75.8
Prupe.1G206900 Prunus persica HOM05D004197 ORTHO05D004975 1.9e-33 145.6 91 76.9
Duzib151G0052 Durio zibethinus HOM05D004197 ORTHO05D004975 3.2e-33 144.8 91 74.7
Hma1.2p1_0307F.1_g119895 Hydrangea macrophylla HOM05D004197 ORTHO05D004975 3.2e-33 144.8 91 75.8
TPR.G16667 Trifolium pratense HOM05D004197 ORTHO05D004975 3.2e-33 144.8 89 75.3
Gorai.004G083000 Gossypium raimondii HOM05D004197 ORTHO05D004975 4.2e-33 144.4 91 74.7
MSTRG.27564 Avicennia marina HOM05D004197 ORTHO05D004975 5.5e-33 144.1 91 75.8
Cfa015042 Carpinus fangiana HOM05D004197 ORTHO05D004975 5.5e-33 144.1 91 74.7
Gohir.A05G367700 Gossypium hirsutum HOM05D004197 ORTHO05D004975 5.5e-33 144.1 91 74.7
Gohir.D10G075200 Gossypium hirsutum HOM05D004197 ORTHO05D004975 5.5e-33 144.1 91 74.7
Gohir.D10G123800 Gossypium hirsutum HOM05D004197 ORTHO05D004975 7.1e-33 143.7 91 74.7
MBI11_g23942_MAGBIO Magnolia biondii HOM05D004197 ORTHO05D004975 7.1e-33 143.7 91 75.8
Atru.chr12.1293 Acer truncatum HOM05D004197 ORTHO05D004975 9.3e-33 143.3 91 73.6
Aa31LG10G13940 Aethionema arabicum HOM05D004197 ORTHO05D004975 9.3e-33 143.3 91 76.9
Gohir.D04G047600 Gossypium hirsutum HOM05D004197 ORTHO05D004975 9.3e-33 143.3 91 74.7
Lalb_Chr04g0253841 Lupinus albus HOM05D004197 ORTHO05D004975 9.3e-33 143.3 91 74.7
Nitab4.5_0007872g0010 Nicotiana tabacum HOM05D004197 ORTHO05D004975 9.3e-33 143.3 91 76.9
Thecc.04G166300 Theobroma cacao HOM05D004197 ORTHO05D004975 9.3e-33 143.3 91 73.6
AL5G41720 Arabidopsis lyrata HOM05D004197 ORTHO05D004975 1.2e-32 142.9 91 76.9
Carub.0005s2637 Capsella rubella HOM05D004197 ORTHO05D004975 1.2e-32 142.9 91 76.9
CiPaw.11G096400 Carya illinoinensis HOM05D004197 ORTHO05D004975 1.2e-32 142.9 91 73.6
Cc02_g26370 Coffea canephora HOM05D004197 ORTHO05D004975 1.2e-32 142.9 91 75.8
Medtr8g022770 Medicago truncatula HOM05D004197 ORTHO05D004975 1.2e-32 142.9 89 74.2
AT3G59650 Arabidopsis thaliana HOM05D004197 ORTHO05D004975 1.6e-32 142.5 91 76.9
CAN.G525.23 Capsicum annuum HOM05D004197 ORTHO05D004975 1.6e-32 142.5 91 76.9
Ca_10539_v3 Cicer arietinum L. HOM05D004197 ORTHO05D004975 1.6e-32 142.5 89 76.4
Eucgr.G02225 Eucalyptus grandis HOM05D004197 ORTHO05D004975 1.6e-32 142.5 91 73.6
Gohir.D02G135200 Gossypium hirsutum HOM05D004197 ORTHO05D004975 1.6e-32 142.5 91 74.7
Atru.chr12.1301 Acer truncatum HOM05D004197 ORTHO05D004975 2.1e-32 142.1 91 72.5
EL10Ac6g15364 Beta vulgaris HOM05D004197 ORTHO05D004975 2.1e-32 142.1 91 75.8
CSS0039414 Camellia sinensis var. sinensis HOM05D004197 ORTHO05D004975 2.1e-32 142.1 91 72.5
CSS0047181 Camellia sinensis var. sinensis HOM05D004197 ORTHO05D004975 2.1e-32 142.1 91 72.5
Ca_23424_v3 Cicer arietinum L. HOM05D004197 ORTHO05D004975 2.1e-32 142.1 89 77.5
Cc03_g14030 Coffea canephora HOM05D004197 ORTHO05D004975 2.1e-32 142.1 91 76.9
Nn1g09691 Nelumbo nucifera HOM05D004197 ORTHO05D004975 2.1e-32 142.1 91 73.6
Psat1g223520 Pisum sativum HOM05D004197 ORTHO05D004975 2.1e-32 142.1 89 74.2
Rhsim03G0176800 Rhododendron simsii HOM05D004197 ORTHO05D004975 2.1e-32 142.1 89 75.3
CARHR170020 Cardamine hirsuta HOM05D004197 ORTHO05D004975 2.7e-32 141.7 91 75.8
Dinv33200 Davidia involucrata HOM05D004197 ORTHO05D004975 2.7e-32 141.7 88 76.1
Oeu016610.1 Olea europaea HOM05D004197 ORTHO05D004975 2.7e-32 141.7 91 73.6
Psat4g166320 Pisum sativum HOM05D004197 ORTHO05D004975 2.7e-32 141.7 91 73.6
Cpa.g.sc10.180 Carica papaya HOM05D004197 ORTHO05D004975 3.5e-32 141.4 91 74.7
Gohir.D08G078000 Gossypium hirsutum HOM05D004197 ORTHO05D004975 3.5e-32 141.4 91 73.6
Lalb_Chr10g0101191 Lupinus albus HOM05D004197 ORTHO05D004975 3.5e-32 141.4 91 73.6
Hund04335 Selenicereus undatus HOM05D004197 ORTHO05D004975 3.5e-32 141.4 91 73.6
ECA240G1468 Erigeron canadensis HOM05D004197 ORTHO05D004975 4.6e-32 141.0 91 74.7
HanXRQChr09g0264591 Helianthus annuus HOM05D004197 ORTHO05D004975 4.6e-32 141.0 91 74.7
HanXRQChr10g0286001 Helianthus annuus HOM05D004197 ORTHO05D004975 4.6e-32 141.0 91 74.7
Lsat_1_v5_gn_6_33001 Lactuca sativa HOM05D004197 ORTHO05D004975 4.6e-32 141.0 91 76.9
Nitab4.5_0000902g0310 Nicotiana tabacum HOM05D004197 ORTHO05D004975 4.6e-32 141.0 91 75.8
Peaxi162Scf00196g00222 Petunia axillaris HOM05D004197 ORTHO05D004975 4.6e-32 141.0 91 75.8
Atru.chr4.2919 Acer truncatum HOM05D004197 ORTHO05D004975 6.0e-32 140.6 91 72.5
Migut.F01587 Erythranthe guttata HOM05D004197 ORTHO05D004975 6.0e-32 140.6 91 74.7
PGR142G4086 Punica granatum HOM05D004197 ORTHO05D004975 6.0e-32 140.6 91 75.8
Lsat_1_v5_gn_5_190681 Lactuca sativa HOM05D004197 ORTHO05D004975 7.9e-32 140.2 91 76.9
EL10Ac3g06082 Beta vulgaris HOM05D004197 ORTHO05D004975 1.0e-31 139.8 91 73.6
QL10p055721 Quercus lobata HOM05D004197 ORTHO05D004975 1.0e-31 139.8 89 76.4
arahy.Tifrunner.gnm1.ann1.4JR04K Arachis hypogaea HOM05D004197 ORTHO05D004975 1.3e-31 139.4 91 71.4
arahy.Tifrunner.gnm1.ann1.5DCW4K Arachis hypogaea HOM05D004197 ORTHO05D004975 1.3e-31 139.4 91 71.4
Duzib212G0574 Durio zibethinus HOM05D004197 ORTHO05D004975 1.3e-31 139.4 91 72.5
Gorai.005G151300 Gossypium raimondii HOM05D004197 ORTHO05D004975 1.3e-31 139.4 91 72.5
arahy.Tifrunner.gnm1.ann1.E9H45Q Arachis hypogaea HOM05D004197 ORTHO05D004975 1.8e-31 139.0 89 71.9
BcaC08g44998 Brassica carinata HOM05D004197 ORTHO05D004975 1.8e-31 139.0 91 74.7
A07p24720 Brassica napus HOM05D000455 ORTHO05D000434 1.8e-31 139.0 91 74.7
C06p26290 Brassica napus HOM05D000455 ORTHO05D000434 1.8e-31 139.0 91 74.7
BolC6t37793H Brassica oleracea HOM05D004197 ORTHO05D004975 1.8e-31 139.0 91 74.7
BraA07t30117Z Brassica rapa HOM05D004197 ORTHO05D004975 1.8e-31 139.0 91 74.7
Gorai.011G081000 Gossypium raimondii HOM05D004197 ORTHO05D004975 1.8e-31 139.0 91 73.6
SalBow6G6028 Salvia bowleyana HOM05D004197 ORTHO05D004975 1.8e-31 139.0 90 73.3
CiPaw.12G066300 Carya illinoinensis HOM05D004197 ORTHO05D004975 2.3e-31 138.7 91 71.4
MD08G1230600 Malus domestica HOM05D004197 ORTHO05D004975 2.3e-31 138.7 91 73.6
Phvul.003G238300 Phaseolus vulgaris HOM05D004197 ORTHO05D004975 2.3e-31 138.7 89 71.9
Sp5g03530 Schrenkiella parvula HOM05D004197 ORTHO05D004975 2.3e-31 138.7 91 74.7
Lj1g0017974 Lotus japonicus HOM05D004197 ORTHO05D004975 3.0e-31 138.3 88 71.6
QL04p073242 Quercus lobata HOM05D004197 ORTHO05D004975 3.0e-31 138.3 89 74.2
ECA247G1539 Erigeron canadensis HOM05D004197 ORTHO05D004975 3.9e-31 137.9 91 75.8
Thhalv10006316m.g Eutrema salsugineum HOM05D004197 ORTHO05D004975 3.9e-31 137.9 91 74.7
Zm00001eb007240 Zea mays HOM05D004197 ORTHO05D004975 3.9e-31 137.9 91 73.6
BcaC07g40496 Brassica carinata HOM05D004197 ORTHO05D004975 5.1e-31 137.5 91 73.6
A09p51920 Brassica napus HOM05D004197 ORTHO05D004975 5.1e-31 137.5 91 73.6
C08p34650 Brassica napus HOM05D004197 ORTHO05D004975 5.1e-31 137.5 91 73.6
BolC8t51067H Brassica oleracea HOM05D004197 ORTHO05D004975 5.1e-31 137.5 91 73.6
BraA09t40628Z Brassica rapa HOM05D004197 ORTHO05D004975 5.1e-31 137.5 91 73.6
HPP92_007604 Vanilla planifolia HOM05D004197 ORTHO05D004975 5.1e-31 137.5 91 71.4
VMungo0251G3068 Vigna mungo HOM05D004197 ORTHO05D004975 5.1e-31 137.5 89 71.9
Glyma.17G164900 Glycine max HOM05D004197 ORTHO05D004975 6.7e-31 137.1 89 70.8
Os03g0207250 Oryza sativa ssp. japonica HOM05D004197 ORTHO05D004975 6.7e-31 137.1 91 72.5
Solyc04g014390.3 Solanum lycopersicum HOM05D004197 ORTHO05D004975 6.7e-31 137.1 91 73.6
Sopen04g006520 Solanum pennellii HOM05D004197 ORTHO05D004975 6.7e-31 137.1 91 73.6
Atru.chr12.1273 Acer truncatum HOM05D004197 ORTHO05D004975 8.7e-31 136.7 91 70.3
BcaB02g07455 Brassica carinata HOM05D004197 ORTHO05D004975 8.7e-31 136.7 91 73.6
Rhsim02G0084000 Rhododendron simsii HOM05D004197 ORTHO05D004975 8.7e-31 136.7 85 74.1
CDE02G1869 Ceratophyllum demersum HOM05D004197 ORTHO05D004975 1.9e-30 135.6 89 73.0
FvH4_2g13530 Fragaria vesca HOM05D004197 ORTHO05D004975 1.9e-30 135.6 83 75.9
SalBow2G3321 Salvia bowleyana HOM05D004197 ORTHO05D004975 2.5e-30 135.2 90 71.1
PSO832G1844 Papaver somniferum HOM05D004197 ORTHO05D004975 3.3e-30 134.8 89 71.9
Zm00001eb400580 Zea mays HOM05D004197 ORTHO05D004975 4.3e-30 134.4 91 72.5
Glyma.05G102000 Glycine max HOM05D004197 ORTHO05D004975 5.6e-30 134.0 89 70.8
CsaV3_4G002820 Cucumis sativus L. HOM05D004197 ORTHO05D004975 7.4e-30 133.7 91 68.1
unitig_899.g14470 Utricularia gibba HOM05D004197 ORTHO05D004975 7.4e-30 133.7 91 69.2
PGSC0003DMG401023624 Solanum tuberosum HOM05D004197 ORTHO05D004975 9.6e-30 133.3 91 72.5
CANSAT80G2644 Cannabis sativa HOM05D004197 ORTHO05D004975 1.3e-29 132.9 91 71.4
PSO017G5565 Papaver somniferum HOM05D004197 ORTHO05D004975 1.3e-29 132.9 89 70.8
PSO675G0737 Papaver somniferum HOM05D004197 ORTHO05D004975 1.3e-29 132.9 89 70.8
THA.LOC104804007 Tarenaya hassleriana HOM05D004197 ORTHO05D004975 1.3e-29 132.9 91 71.4
Aqoxy7G00569 Aquilegia oxysepala HOM05D004197 ORTHO05D004975 2.1e-29 132.1 91 70.3
ATR0733G162 Amborella trichopoda HOM05D004197 ORTHO05D004975 2.8e-29 131.7 91 68.1
MELO3C017759.2 Cucumis melo HOM05D004197 ORTHO05D004975 3.7e-29 131.3 91 67.0
PSO591G0183 Papaver somniferum HOM05D004197 ORTHO05D004975 3.7e-29 131.3 89 70.8
FAN24G1973 Fragaria x ananassa HOM05D004197 ORTHO05D004975 4.8e-29 131.0 81 75.3
ClCG07G015230 Citrullus lanatus HOM05D004197 ORTHO05D004975 8.2e-29 130.2 91 65.9
Sp2g07880 Schrenkiella parvula HOM05D004197 ORTHO05D004975 8.2e-29 130.2 91 71.4
Manes.06G021100 Manihot esculenta HOM05D004197 ORTHO05D004975 1.1e-28 129.8 91 69.2
CARHR099320 Cardamine hirsuta HOM05D004197 ORTHO05D004975 4.0e-28 127.9 83 74.7
TAR629G0957 Trochodendron aralioides HOM05D004197 ORTHO05D004975 4.0e-28 127.9 90 67.8
arahy.Tifrunner.gnm1.ann1.XY21PC Arachis hypogaea HOM05D004197 ORTHO05D004975 9.0e-28 126.7 91 65.9
TAR362G0244 Trochodendron aralioides HOM05D000090 ORTHO05D001584 9.0e-28 126.7 82 72.0
Phvul.010G124900 Phaseolus vulgaris HOM05D004197 ORTHO05D004975 2.0e-27 125.6 82 70.7
Sed0002539 Sechium edule HOM05D004197 ORTHO05D004975 2.6e-27 125.2 91 63.7
Actinidia11444 Actinidia chinensis HOM05D005056 ORTHO05D006487 1.0e-26 123.2 81 70.4
Gohir.D08G220700 Gossypium hirsutum HOM05D004197 ORTHO05D004975 1.0e-26 123.2 77 75.3
Potri.013G126200 Populus trichocarpa HOM05D004197 ORTHO05D004975 1.0e-26 123.2 91 65.9
QL04p093649 Quercus lobata HOM05D004197 ORTHO05D004975 1.0e-26 123.2 82 72.0
TPR.G31074 Trifolium pratense HOM05D004197 ORTHO05D006502 1.3e-26 122.9 92 65.2
CDE09G0571 Ceratophyllum demersum HOM05D004197 ORTHO05D004975 2.2e-26 122.1 81 74.1
arahy.Tifrunner.gnm1.ann1.60591L Arachis hypogaea HOM05D004197 ORTHO05D004975 2.5e-25 118.6 98 61.2
SGA_v2.0_scaffold49G18240 Striga asiatica HOM05D004197 ORTHO05D004975 2.3e-23 112.1 81 66.7
Mapoly0027s0066 Marchantia polymorpha HOM05D004197 ORTHO05D004975 1.3e-21 106.3 91 61.5
TAR493G0004 Trochodendron aralioides HOM05D004197 ORTHO05D004975 1.6e-21 105.9 78 67.9
Sabra13G0105500 Salix brachista HOM05D004197 ORTHO05D004975 3.7e-21 104.8 91 62.6
Lj3g0000340 Lotus japonicus HOM05D004197 ORTHO05D004975 6.3e-21 104.0 77 64.9
Pp3c1_20100 Physcomitrium patens HOM05D004197 ORTHO05D004975 6.3e-21 104.0 86 58.1
SEGI_18755 Sequoiadendron giganteum HOM05D004197 ORTHO05D004975 8.2e-21 103.6 91 56.0
Glyma.07G044001 Glycine max HOM05D004197 ORTHO05D004975 1.8e-20 102.4 89 60.7
SHI24203 Sapria himalayana HOM05D004197 ORTHO05D004975 1.2e-19 99.8 83 60.2
Lsat_1_v5_gn_6_23540 Lactuca sativa HOM05D004197 ORTHO05D004975 1.0e-18 96.7 69 69.6
C04p24770 Brassica napus HOM05D004197 ORTHO05D004975 2.5e-17 92.0 81 64.2
BolC4t23981H Brassica oleracea HOM05D004197 ORTHO05D004975 2.5e-17 92.0 81 64.2
Peaxi162Scf00474g00723 Petunia axillaris HOM05D004197 ORTHO05D004975 2.5e-17 92.0 91 56.0
Gohir.D04G172540 Gossypium hirsutum HOM05D004197 ORTHO05D004975 7.2e-17 90.5 68 64.7
BcaC02g10824 Brassica carinata HOM05D004197 ORTHO05D004975 2.1e-16 89.0 81 63.0
Gorai.012G161800 Gossypium raimondii HOM05D004197 ORTHO05D004975 3.6e-16 88.2 68 63.2
Lsat_1_v5_gn_2_131080 Lactuca sativa HOM05D004197 ORTHO05D004975 7.9e-16 87.0 80 61.2
SMO347G0376 Selaginella moellendorffii HOM05D004197 ORTHO05D004975 5.1e-15 84.3 90 43.3
Gorai.004G076200 Gossypium raimondii HOM05D004197 ORTHO05D004975 8.8e-15 83.6 57 71.9
unitig_736.g22525 Utricularia gibba HOM05D000398 ORTHO05D000551 8.2e-13 77.0 57 63.2
Gorai.004G234500 Gossypium raimondii HOM05D004197 ORTHO05D004975 1.1e-12 76.6 53 69.8
Cre06.g270650 Chlamydomonas reinhardtii HOM05D004197 ORTHO05D004975 1.5e-11 72.8 87 40.2
Thecc.10G088100 Theobroma cacao HOM05D004197 ORTHO05D004975 1.4e-07 59.7 38 73.7
Hma1.2p1_0150F.1_g066800 Hydrangea macrophylla HOM05D004197 ORTHO05D004975 2.6e-06 55.5 33 75.8
vmacro16589 Vaccinium macrocarpon HOM05D004197 ORTHO05D004975 3.3e-06 55.1 33 72.7


User provided reference genes

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