Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_009568 Daucus carota HOM05D004438 ORTHO05D005256 1.8e-69 265.8 129 100.0
DCAR_009565 Daucus carota HOM05D004438 ORTHO05D005256 1.1e-68 263.1 129 99.2
Cc10_g15830 Coffea canephora HOM05D004438 ORTHO05D005256 1.2e-62 243.0 129 89.1
ECA233G2293 Erigeron canadensis HOM05D004438 ORTHO05D005256 4.8e-59 231.1 129 86.8
Eucgr.F02140 Eucalyptus grandis HOM05D004438 ORTHO05D005256 4.8e-59 231.1 127 83.5
Lsat_1_v5_gn_8_150501 Lactuca sativa HOM05D004438 ORTHO05D005256 4.8e-59 231.1 129 86.0
Peaxi162Scf00979g00008 Petunia axillaris HOM05D004438 ORTHO05D005256 6.3e-59 230.7 129 85.3
Nitab4.5_0003709g0100 Nicotiana tabacum HOM05D004438 ORTHO05D005256 8.2e-59 230.3 129 83.7
Cpa.g.sc21.8 Carica papaya HOM05D004438 ORTHO05D005256 2.4e-58 228.8 125 86.4
Nitab4.5_0000131g0360 Nicotiana tabacum HOM05D004438 ORTHO05D005256 3.1e-58 228.4 129 82.9
MBI11_g03707_MAGBIO Magnolia biondii HOM05D004438 ORTHO05D005256 4.1e-58 228.0 127 83.5
Potri.002G105400 Populus trichocarpa HOM05D004438 ORTHO05D005256 4.1e-58 228.0 127 85.0
Cfa002762 Carpinus fangiana HOM05D004438 ORTHO05D005256 6.9e-58 227.3 125 84.8
Haze_25054 Corylus avellana HOM05D004438 ORTHO05D005256 6.9e-58 227.3 126 84.1
HanXRQChr12g0372061 Helianthus annuus HOM05D004438 ORTHO05D005256 9.1e-58 226.9 124 86.3
RcHm_v2.0_Chr2g0117091 Rosa chinensis HOM05D004438 ORTHO05D005256 9.1e-58 226.9 126 87.3
COL.COLO4_11000 Corchorus olitorius HOM05D004438 ORTHO05D005256 1.2e-57 226.5 126 84.1
PSO675G7198 Papaver somniferum HOM05D004438 ORTHO05D005256 1.2e-57 226.5 123 85.4
Gorai.007G245000 Gossypium raimondii HOM05D004438 ORTHO05D005256 2.0e-57 225.7 126 83.3
Potri.005G156400 Populus trichocarpa HOM05D004438 ORTHO05D005256 2.0e-57 225.7 127 85.0
Rhsim10G0149000 Rhododendron simsii HOM05D004438 ORTHO05D005256 2.0e-57 225.7 123 85.4
AL8G42290 Arabidopsis lyrata HOM05D004438 ORTHO05D005256 3.4e-57 224.9 129 81.4
Dinv42684 Davidia involucrata HOM05D004438 ORTHO05D005256 3.4e-57 224.9 126 82.5
Duzib187G1770 Durio zibethinus HOM05D004438 ORTHO05D005256 3.4e-57 224.9 126 83.3
Solyc04g076260.2 Solanum lycopersicum HOM05D004438 ORTHO05D005256 3.4e-57 224.9 129 82.9
Sopen00g011470 Solanum pennellii HOM05D004438 ORTHO05D005256 3.4e-57 224.9 128 82.8
Thecc.01G114400 Theobroma cacao HOM05D004438 ORTHO05D005256 3.4e-57 224.9 126 84.1
Carub.0008s2564 Capsella rubella HOM05D004438 ORTHO05D005256 4.5e-57 224.6 127 81.9
CAN.G475.35 Capsicum annuum HOM05D004438 ORTHO05D005256 4.5e-57 224.6 129 83.7
Gohir.A11G197600 Gossypium hirsutum HOM05D004438 ORTHO05D005256 4.5e-57 224.6 126 82.5
PSO541G1989 Papaver somniferum HOM05D004438 ORTHO05D005256 4.5e-57 224.6 123 84.6
QL06p031963 Quercus lobata HOM05D004438 ORTHO05D005256 4.5e-57 224.6 126 83.3
AT5G64816 Arabidopsis thaliana HOM05D004438 ORTHO05D005256 5.9e-57 224.2 127 81.1
FvH4_1g22770 Fragaria vesca HOM05D004438 ORTHO05D005256 5.9e-57 224.2 126 85.7
FAN19G1036 Fragaria x ananassa HOM05D004438 ORTHO05D005256 5.9e-57 224.2 126 85.7
FAN23G1009 Fragaria x ananassa HOM05D004438 ORTHO05D005256 5.9e-57 224.2 126 85.7
FAN26G1829 Fragaria x ananassa HOM05D004438 ORTHO05D005256 5.9e-57 224.2 126 85.7
FAN28G0942 Fragaria x ananassa HOM05D004438 ORTHO05D005256 5.9e-57 224.2 126 85.7
THA.LOC104799304 Tarenaya hassleriana HOM05D004438 ORTHO05D005256 5.9e-57 224.2 125 85.6
Ah.03g137490 Amaranthus hybridus HOM05D004438 ORTHO05D005256 1.0e-56 223.4 126 81.0
AUR62027160 Chenopodium quinoa HOM05D004438 ORTHO05D005256 1.0e-56 223.4 121 85.1
AUR62044399 Chenopodium quinoa HOM05D004438 ORTHO05D005256 1.0e-56 223.4 121 85.1
Medtr1g073620 Medicago truncatula HOM05D004438 ORTHO05D005256 1.3e-56 223.0 125 84.0
Phvul.L002244 Phaseolus vulgaris HOM05D004438 ORTHO05D005256 1.3e-56 223.0 125 83.2
VMungo0720G0202 Vigna mungo HOM05D004438 ORTHO05D005256 1.3e-56 223.0 125 83.2
MD03G1238400 Malus domestica HOM05D004438 ORTHO05D005256 1.7e-56 222.6 125 86.4
TAR381G0625 Trochodendron aralioides HOM05D004438 ORTHO05D005256 1.7e-56 222.6 126 83.3
Ciclev10002841m.g Citrus clementina HOM05D004438 ORTHO05D005256 2.2e-56 222.2 124 84.7
Os03g0185600 Oryza sativa ssp. japonica HOM05D004438 ORTHO05D005256 2.9e-56 221.9 123 84.6
TAR625G0091 Trochodendron aralioides HOM05D004438 ORTHO05D005256 2.9e-56 221.9 126 81.7
Actinidia06107 Actinidia chinensis HOM05D004438 ORTHO05D005256 3.8e-56 221.5 126 80.2
MD15G1340400 Malus domestica HOM05D004438 ORTHO05D005256 3.8e-56 221.5 123 87.0
PGSC0003DMG400009364 Solanum tuberosum HOM05D004438 ORTHO05D005256 3.8e-56 221.5 129 82.2
SGA_v2.0_scaffold79G25619 Striga asiatica HOM05D004438 ORTHO05D005256 3.8e-56 221.5 126 81.7
Aqoxy2G01099 Aquilegia oxysepala HOM05D004438 ORTHO05D005256 5.0e-56 221.1 126 83.3
Gohir.D11G231900 Gossypium hirsutum HOM05D004438 ORTHO05D005256 5.0e-56 221.1 126 82.5
Lalb_Chr02g0150651 Lupinus albus HOM05D004438 ORTHO05D005256 5.0e-56 221.1 125 83.2
Prupe.4G171500 Prunus persica HOM05D004438 ORTHO05D005256 5.0e-56 221.1 125 85.6
C03p61350 Brassica napus HOM05D004438 ORTHO05D005256 6.5e-56 220.7 129 81.4
BraA06t26098Z Brassica rapa HOM05D004438 ORTHO05D005256 6.5e-56 220.7 129 81.4
Ah.02g126620 Amaranthus hybridus HOM05D004438 ORTHO05D005256 8.5e-56 220.3 126 80.2
A06p31610 Brassica napus HOM05D004438 ORTHO05D005256 8.5e-56 220.3 128 81.2
ClCG01G016040 Citrullus lanatus HOM05D004438 ORTHO05D005256 8.5e-56 220.3 126 80.2
QL01p009111 Quercus lobata HOM05D004438 ORTHO05D005256 8.5e-56 220.3 125 82.4
Solyc04g051710.2 Solanum lycopersicum HOM05D004438 ORTHO05D005256 8.5e-56 220.3 123 81.3
Sopen04g023090 Solanum pennellii HOM05D004438 ORTHO05D005256 8.5e-56 220.3 123 81.3
Peaxi162Scf00106g00162 Petunia axillaris HOM05D004438 ORTHO05D005256 1.1e-55 219.9 123 81.3
Prupe.6G170300 Prunus persica HOM05D004438 ORTHO05D005256 1.1e-55 219.9 124 84.7
Atru.chr13.1020 Acer truncatum HOM05D004438 ORTHO05D005256 1.4e-55 219.5 129 82.2
Lj5g0016992 Lotus japonicus HOM05D004438 ORTHO05D005256 1.4e-55 219.5 125 82.4
CARHR278820 Cardamine hirsuta HOM05D004438 ORTHO05D005256 1.9e-55 219.2 127 80.3
Glyma.01G200000 Glycine max HOM05D004438 ORTHO05D005256 1.9e-55 219.2 127 79.5
PGSC0003DMG400031197 Solanum tuberosum HOM05D004438 ORTHO05D005256 1.9e-55 219.2 123 80.5
TWI53G0984 Tripterygium wilfordii HOM05D004438 ORTHO05D005256 1.9e-55 219.2 125 81.6
Zm00001eb006400 Zea mays HOM05D004438 ORTHO05D005256 1.9e-55 219.2 123 83.7
Dinv19477 Davidia involucrata HOM05D004438 ORTHO05D005256 2.5e-55 218.8 122 82.0
Oeu027202.1 Olea europaea HOM05D004438 ORTHO05D005256 2.5e-55 218.8 126 78.6
CiPaw.03G133700 Carya illinoinensis HOM05D004438 ORTHO05D005256 3.2e-55 218.4 126 79.4
BcaB02g09832 Brassica carinata HOM05D004438 ORTHO05D005256 4.2e-55 218.0 127 80.3
BcaC01g02715 Brassica carinata HOM05D004438 ORTHO05D005256 4.2e-55 218.0 127 80.3
BolC3t18395H Brassica oleracea HOM05D004438 ORTHO05D005256 4.2e-55 218.0 127 80.3
CSS0020413 Camellia sinensis var. sinensis HOM05D004438 ORTHO05D005256 4.2e-55 218.0 126 78.6
Gohir.A10G084200 Gossypium hirsutum HOM05D004438 ORTHO05D005256 4.2e-55 218.0 125 80.0
Sp2g27890 Schrenkiella parvula HOM05D004438 ORTHO05D005256 4.2e-55 218.0 127 80.3
TAR625G0287 Trochodendron aralioides HOM05D004438 ORTHO05D005256 4.2e-55 218.0 124 82.3
CsaV3_6G042320 Cucumis sativus L. HOM05D004438 ORTHO05D005256 5.5e-55 217.6 126 78.6
Glyma.10G190000 Glycine max HOM05D004438 ORTHO05D005256 5.5e-55 217.6 127 79.5
Gorai.011G114100 Gossypium raimondii HOM05D004438 ORTHO05D005256 5.5e-55 217.6 125 80.0
MD15G1331400 Malus domestica HOM05D004438 ORTHO05D005256 5.5e-55 217.6 125 84.8
Gohir.A11G053800 Gossypium hirsutum HOM05D004438 ORTHO05D005256 7.2e-55 217.2 125 79.2
Gohir.D10G104600 Gossypium hirsutum HOM05D004438 ORTHO05D005256 7.2e-55 217.2 125 80.0
SalBow3G3218 Salvia bowleyana HOM05D004438 ORTHO05D005256 7.2e-55 217.2 123 81.3
MSTRG.9937 Avicennia marina HOM05D004438 ORTHO05D005256 9.4e-55 216.9 126 80.2
THA.LOC104819312 Tarenaya hassleriana HOM05D004438 ORTHO05D005256 9.4e-55 216.9 129 80.6
Zm00001eb401580 Zea mays HOM05D004438 ORTHO05D005256 9.4e-55 216.9 123 83.7
Gohir.D11G057300 Gossypium hirsutum HOM05D004438 ORTHO05D005256 1.2e-54 216.5 125 79.2
Nn5g29898 Nelumbo nucifera HOM05D004438 ORTHO05D005256 1.2e-54 216.5 128 80.5
TPR.G28848 Trifolium pratense HOM05D004438 ORTHO05D005256 1.6e-54 216.1 125 80.8
CANSAT01G2942 Cannabis sativa HOM05D004438 ORTHO05D005256 2.1e-54 215.7 123 83.7
SGA_v2.0_scaffold308G48110 Striga asiatica HOM05D004438 ORTHO05D005256 4.7e-54 214.5 126 77.8
vmacro18638 Vaccinium macrocarpon HOM05D004438 ORTHO05D005256 7.9e-54 213.8 126 78.6
Glyma.20G200800 Glycine max HOM05D004438 ORTHO05D005256 1.0e-53 213.4 127 76.4
Sed0014495 Sechium edule HOM05D004438 ORTHO05D005256 1.0e-53 213.4 126 76.2
Sed0003177 Sechium edule HOM05D004438 ORTHO05D005256 1.4e-53 213.0 126 77.0
MELO3C007474.2 Cucumis melo HOM05D004438 ORTHO05D005256 1.8e-53 212.6 126 77.8
Manes.10G131700 Manihot esculenta HOM05D004438 ORTHO05D005256 2.3e-53 212.2 126 79.4
RcHm_v2.0_Chr5g0031621 Rosa chinensis HOM05D000965 ORTHO05D000842 2.3e-53 212.2 125 80.8
TWI74G1039 Tripterygium wilfordii HOM05D004438 ORTHO05D005256 2.3e-53 212.2 119 81.5
GSVIVG01009169001 Vitis vinifera HOM05D004438 ORTHO05D005256 3.0e-53 211.8 123 82.1
Migut.N00230 Erythranthe guttata HOM05D004438 ORTHO05D005256 5.2e-53 211.1 126 77.8
Thhalv10005124m.g Eutrema salsugineum HOM05D004438 ORTHO05D005256 6.7e-53 210.7 127 77.2
Aa31LG1G17110 Aethionema arabicum HOM05D004438 ORTHO05D005256 8.8e-53 210.3 127 77.2
CAN.G344.10 Capsicum annuum HOM05D004438 ORTHO05D005256 1.5e-52 209.5 123 77.2
HPP92_015825 Vanilla planifolia HOM05D004438 ORTHO05D005256 2.0e-52 209.1 124 76.6
Sabra02G0082700 Salix brachista HOM05D004438 ORTHO05D005256 3.3e-52 208.4 112 86.6
Psat6g129880 Pisum sativum HOM05D004438 ORTHO05D005256 5.7e-52 207.6 124 75.8
Nitab4.5_0000184g0290 Nicotiana tabacum HOM05D004438 ORTHO05D005256 1.7e-51 206.1 115 80.9
unitig_699.g19132 Utricularia gibba HOM05D004438 ORTHO05D005256 1.1e-50 203.4 123 76.4
Psat7g208520 Pisum sativum HOM05D004438 ORTHO05D005256 1.4e-50 203.0 125 74.4
Sc03g0004400 Simmondsia chinensis HOM05D004438 ORTHO05D005256 1.8e-50 202.6 115 80.0
Sc23g0000680 Simmondsia chinensis HOM05D004438 ORTHO05D005256 3.1e-50 201.8 125 75.2
ATR1132G028 Amborella trichopoda HOM05D004438 ORTHO05D005256 7.0e-50 200.7 128 75.0
Manes.02G145100 Manihot esculenta HOM05D004438 ORTHO05D005256 7.0e-50 200.7 125 80.8
SalBow2G1806 Salvia bowleyana HOM05D004438 ORTHO05D005256 1.2e-49 199.9 124 75.0
Sabra05G0119900 Salix brachista HOM05D004438 ORTHO05D005256 1.6e-49 199.5 112 83.9
CDE02G2078 Ceratophyllum demersum HOM05D004438 ORTHO05D005256 5.9e-49 197.6 112 83.0
Lalb_Chr21g0312471 Lupinus albus HOM05D004438 ORTHO05D005256 1.7e-48 196.1 118 78.8
FvH4_3g18771 Fragaria vesca HOM05D004438 ORTHO05D005256 2.2e-48 195.7 115 81.7
Nitab4.5_0004977g0040 Nicotiana tabacum HOM05D004438 ORTHO05D005256 5.0e-48 194.5 124 74.2
EL10Ac6g13106 Beta vulgaris HOM05D004438 ORTHO05D005256 1.1e-47 193.4 107 83.2
Nn1g08461 Nelumbo nucifera HOM05D004438 ORTHO05D005256 1.1e-47 193.4 103 88.3
FAN16G1755 Fragaria x ananassa HOM05D004438 ORTHO05D005256 2.5e-47 192.2 109 85.3
Gorai.007G062500 Gossypium raimondii HOM05D004438 ORTHO05D005256 7.2e-47 190.7 125 72.8
TWI56G0149 Tripterygium wilfordii HOM05D004438 ORTHO05D005256 9.4e-47 190.3 125 75.2
Duzib264G0014 Durio zibethinus HOM05D004438 ORTHO05D005256 1.2e-44 183.3 101 85.1
FAN11G0727 Fragaria x ananassa HOM05D000965 ORTHO05D000842 9.7e-44 180.3 98 86.7
Migut.G00404 Erythranthe guttata HOM05D004438 ORTHO05D005256 3.7e-43 178.3 131 70.2
FAN21G3234 Fragaria x ananassa HOM05D000965 ORTHO05D000842 8.2e-43 177.2 98 84.7
SHI31196 Sapria himalayana HOM05D004438 ORTHO05D005256 1.1e-42 176.8 125 66.4
Mapoly0031s0095 Marchantia polymorpha HOM05D004438 ORTHO05D005256 1.8e-42 176.0 123 67.5
Nitab4.5_0004977g0030 Nicotiana tabacum HOM05D004438 ORTHO05D005256 4.5e-41 171.4 89 88.8
AagrBONN_evm.TU.Sc2ySwM_117.295 Anthoceros agrestis HOM05D004438 ORTHO05D005256 3.8e-40 168.3 127 60.6
Oeu028520.2 Olea europaea HOM05D004438 ORTHO05D005256 1.9e-39 166.0 102 77.5
Pp3c22_12110 Physcomitrium patens HOM05D004438 ORTHO05D005256 7.2e-39 164.1 120 62.5
CSS0036861 Camellia sinensis var. sinensis HOM05D004438 ORTHO05D005256 8.0e-38 160.6 98 76.5
COL.COLO4_35234 Corchorus olitorius HOM05D004438 ORTHO05D005256 5.2e-37 157.9 132 62.9
SEGI_36857 Sequoiadendron giganteum HOM05D004438 ORTHO05D005256 6.8e-37 157.5 88 79.5
Rhsim08G0005900 Rhododendron simsii HOM05D004438 ORTHO05D005256 5.7e-36 154.5 102 70.6
AagrBONN_evm.TU.Sc2ySwM_344.1988 Anthoceros agrestis HOM05D004438 ORTHO05D005256 1.3e-32 143.3 126 57.9
Pp3c19_18370 Physcomitrium patens HOM05D004438 ORTHO05D005256 1.3e-32 143.3 119 56.3
SEGI_35678 Sequoiadendron giganteum HOM05D004438 ORTHO05D005256 3.8e-32 141.7 125 56.0
Gohir.1Z049407 Gossypium hirsutum HOM05D004438 ORTHO05D005256 1.6e-30 136.3 69 89.9
arahy.Tifrunner.gnm1.ann1.7JV24P Arachis hypogaea HOM05D004438 ORTHO05D005256 1.7e-24 116.3 57 87.7
CSS0009061 Camellia sinensis var. sinensis HOM05D004438 ORTHO05D005256 4.3e-23 111.7 108 52.8
CSS0034319 Camellia sinensis var. sinensis HOM05D004438 ORTHO05D005256 4.3e-23 111.7 110 52.7
PRCOL_00001176 Prasinoderma coloniale HOM05D004438 ORTHO05D005256 4.3e-23 111.7 77 59.7
ATR0049G041 Amborella trichopoda HOM05D004438 ORTHO05D005256 1.4e-21 106.7 128 42.2
MCO08G336 Micromonas commoda HOM05D004438 ORTHO05D005256 1.8e-21 106.3 109 49.5
CiPaw.04G091100 Carya illinoinensis HOM05D004438 ORTHO05D005256 2.0e-20 102.8 62 79.0
Cre07.g313800 Chlamydomonas reinhardtii HOM05D004438 ORTHO05D005256 5.7e-20 101.3 83 51.8
CSS0036545 Camellia sinensis var. sinensis HOM05D004438 ORTHO05D005256 2.1e-14 82.8 46 80.4
Hund21738 Selenicereus undatus HOM05D004438 ORTHO05D005256 4.9e-11 71.6 35 91.4
CBR_g51299 Chara braunii HOM05D004438 ORTHO05D005256 1.7e-08 63.2 35 77.1
SalBow2G3602 Salvia bowleyana HOM05D004438 ORTHO05D005256 1.7e-08 63.2 32 84.4
SalBow1G8643 Salvia bowleyana HOM05D000379 ORTHO05D000254 5.6e-07 58.2 33 72.7


User provided reference genes

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