Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_009558 Daucus carota HOM05D004831 ORTHO05D003975 0.0e+00 1161.4 613 100.0
Actinidia01793 Actinidia chinensis HOM05D004831 ORTHO05D003975 2.6e-54 217.6 570 33.5
Dinv38059 Davidia involucrata HOM05D004831 ORTHO05D003975 1.3e-53 215.3 608 32.2
Dinv30528 Davidia involucrata HOM05D004831 ORTHO05D003975 1.9e-52 211.5 650 32.0
Actinidia15826 Actinidia chinensis HOM05D004831 ORTHO05D003975 3.2e-52 210.7 435 37.5
CSS0014524 Camellia sinensis var. sinensis HOM05D004831 ORTHO05D003975 2.0e-46 191.4 540 31.5
CiPaw.02G152200 Carya illinoinensis HOM05D004831 ORTHO05D003975 3.4e-46 190.7 416 36.3
Rhsim08G0218700 Rhododendron simsii HOM05D004831 ORTHO05D003975 5.8e-46 189.9 627 32.2
GSVIVG01017152001 Vitis vinifera HOM05D004831 ORTHO05D003975 1.3e-45 188.7 565 32.4
TAR374G0326 Trochodendron aralioides HOM05D004831 ORTHO05D003975 1.7e-45 188.3 404 34.7
TAR626G1756 Trochodendron aralioides HOM05D004831 ORTHO05D003975 1.7e-45 188.3 404 34.7
Potri.003G056600 Populus trichocarpa HOM05D004831 ORTHO05D003975 4.2e-44 183.7 647 30.4
Oeu024063.2 Olea europaea HOM05D004831 ORTHO05D003975 1.6e-43 181.8 401 34.4
Cc04_g03580 Coffea canephora HOM05D004831 ORTHO05D003975 2.1e-43 181.4 405 36.3
Solyc03g120340.3 Solanum lycopersicum HOM05D004831 ORTHO05D003975 7.9e-43 179.5 421 34.9
vmacro18933 Vaccinium macrocarpon HOM05D004831 ORTHO05D003975 1.0e-42 179.1 486 35.4
Sopen03g039230 Solanum pennellii HOM05D004831 ORTHO05D003975 3.9e-42 177.2 399 35.6
Cfa002050 Carpinus fangiana HOM05D004831 ORTHO05D003975 8.7e-42 176.0 417 34.5
Duzib235G0180 Durio zibethinus HOM05D004831 ORTHO05D003975 1.1e-41 175.6 435 34.7
TWI18G0228 Tripterygium wilfordii HOM05D004831 ORTHO05D003975 3.3e-41 174.1 583 30.9
Lj5A62T33 Lonicera japonica HOM05D004831 ORTHO05D003975 3.7e-40 170.6 530 30.6
Thecc.06G083000 Theobroma cacao HOM05D004831 ORTHO05D003975 3.7e-40 170.6 641 29.6
Sabra03G0032100 Salix brachista HOM05D004831 ORTHO05D003975 6.3e-40 169.9 618 29.1
TAR383G0472 Trochodendron aralioides HOM05D004831 ORTHO05D003975 1.8e-39 168.3 405 33.1
Nn8g39278 Nelumbo nucifera HOM05D004831 ORTHO05D003975 2.4e-39 167.9 399 31.3
PGSC0003DMG400002560 Solanum tuberosum HOM05D004831 ORTHO05D003975 2.4e-39 167.9 400 35.0
Ciclev10024870m.g Citrus clementina HOM05D004831 ORTHO05D003975 4.1e-39 167.2 605 29.6
Peaxi162Scf00015g00247 Petunia axillaris HOM05D004831 ORTHO05D003975 4.1e-39 167.2 586 29.5
Gorai.011G078100 Gossypium raimondii HOM05D004831 ORTHO05D003975 6.9e-39 166.4 634 29.0
Oeu021950.1 Olea europaea HOM05D004831 ORTHO05D003975 1.2e-38 165.6 488 30.7
CAN.G438.52 Capsicum annuum HOM05D004831 ORTHO05D003975 2.6e-38 164.5 479 31.9
Cpa.g.sc10.161 Carica papaya HOM05D004831 ORTHO05D003975 3.4e-38 164.1 456 35.1
Hma1.2p1_0682F.1_g202670 Hydrangea macrophylla HOM05D004831 ORTHO05D003975 5.9e-38 163.3 460 33.3
MSTRG.22702 Avicennia marina HOM05D004831 ORTHO05D003975 1.3e-37 162.2 418 33.7
Gohir.A10G079000 Gossypium hirsutum HOM05D004831 ORTHO05D003975 1.7e-37 161.8 639 29.6
QL05p025363 Quercus lobata HOM05D004831 ORTHO05D003975 8.5e-37 159.5 508 30.5
Gohir.D10G072500 Gossypium hirsutum HOM05D004831 ORTHO05D003975 1.9e-36 158.3 442 32.8
TWI12G0693 Tripterygium wilfordii HOM05D004831 ORTHO05D003975 2.5e-36 157.9 573 29.0
Migut.I00846 Erythranthe guttata HOM05D004831 ORTHO05D003975 3.2e-36 157.5 427 33.0
Prupe.3G073700 Prunus persica HOM05D004831 ORTHO05D003975 2.1e-35 154.8 598 27.8
Manes.11G052100 Manihot esculenta HOM05D004831 ORTHO05D003975 8.7e-34 149.4 590 31.4
Atru.chr1.3226 Acer truncatum HOM05D004831 ORTHO05D003975 3.3e-33 147.5 448 31.7
DCAR_026304 Daucus carota HOM05D004831 ORTHO05D003975 9.7e-33 146.0 394 33.2
CANSAT56G2043 Cannabis sativa HOM05D004831 ORTHO05D003975 1.6e-32 145.2 649 25.9
Hma1.2p1_0323F.1_g125270 Hydrangea macrophylla HOM05D004831 ORTHO05D003975 1.6e-32 145.2 398 34.4
Hma1.2p1_2171F.1_g315970 Hydrangea macrophylla HOM05D004831 ORTHO05D003975 1.6e-32 145.2 398 34.4
Nitab4.5_0003885g0040 Nicotiana tabacum HOM05D004831 ORTHO05D003975 1.4e-31 142.1 386 31.9
Ca_24215_v3 Cicer arietinum L. HOM05D004831 ORTHO05D003975 2.4e-31 141.4 401 32.2
COL.COLO4_30332 Corchorus olitorius HOM05D004831 ORTHO05D003975 3.1e-31 141.0 357 33.3
Gohir.A09G084100 Gossypium hirsutum HOM05D004831 ORTHO05D003975 6.9e-31 139.8 361 34.9
Lj3g0022365 Lotus japonicus HOM05D004831 ORTHO05D003975 6.9e-31 139.8 446 33.0
MELO3C023366.2 Cucumis melo HOM05D004831 ORTHO05D003975 9.1e-31 139.4 407 32.2
Glyma.13G360700 Glycine max HOM05D004831 ORTHO05D003975 9.1e-31 139.4 438 32.6
Gohir.D09G083900 Gossypium hirsutum HOM05D004831 ORTHO05D003975 2.0e-30 138.3 341 36.4
Medtr8g467560 Medicago truncatula HOM05D004831 ORTHO05D003975 2.0e-30 138.3 427 30.2
PGR102G0340 Punica granatum HOM05D004831 ORTHO05D003975 5.9e-30 136.7 531 30.3
ClCG09G002300 Citrullus lanatus HOM05D004831 ORTHO05D003975 1.3e-29 135.6 598 26.9
Gorai.006G099900 Gossypium raimondii HOM05D004831 ORTHO05D003975 2.9e-29 134.4 573 29.5
Sed0027172 Sechium edule HOM05D004831 ORTHO05D003975 2.9e-29 134.4 538 27.9
SGA_v2.0_scaffold37G14809 Striga asiatica HOM05D004831 ORTHO05D003975 5.0e-29 133.7 444 31.3
Eucgr.F03008 Eucalyptus grandis HOM05D004831 ORTHO05D003975 6.5e-29 133.3 474 30.8
Nitab4.5_0003159g0050 Nicotiana tabacum HOM05D004831 ORTHO05D003975 6.5e-29 133.3 391 30.4
Glyma.15G013200 Glycine max HOM05D004831 ORTHO05D003975 1.1e-28 132.5 383 32.1
TPR.G31352 Trifolium pratense HOM05D004831 ORTHO05D003975 1.1e-28 132.5 397 33.5
CsaV3_7G033010 Cucumis sativus L. HOM05D004831 ORTHO05D003975 1.9e-28 131.7 639 26.4
Hund06602 Selenicereus undatus HOM05D004831 ORTHO05D003975 1.9e-28 131.7 478 30.3
Lalb_Chr24g0395761 Lupinus albus HOM05D004831 ORTHO05D003975 5.5e-28 130.2 523 31.9
Potri.001G178200 Populus trichocarpa HOM05D004831 ORTHO05D003975 1.2e-27 129.0 598 26.8
Aa31LG7G15290 Aethionema arabicum HOM05D004831 ORTHO05D003975 2.1e-27 128.3 378 32.8
PSO782G5420 Papaver somniferum HOM05D004831 ORTHO05D003975 3.6e-27 127.5 443 28.0
RcHm_v2.0_Chr2g0137511 Rosa chinensis HOM05D004831 ORTHO05D003975 3.6e-27 127.5 563 28.6
Aa31sc115G30 Aethionema arabicum HOM05D004831 ORTHO05D003975 4.6e-27 127.1 389 32.4
Sc15g0001240 Simmondsia chinensis HOM05D004831 ORTHO05D003975 7.9e-27 126.3 606 25.2
Lsat_1_v5_gn_1_34820 Lactuca sativa HOM05D004831 ORTHO05D003975 5.1e-26 123.6 545 26.6
PSO063G2677 Papaver somniferum HOM05D004831 ORTHO05D003975 5.1e-26 123.6 428 27.6
Medtr6g068960 Medicago truncatula HOM05D004831 ORTHO05D003975 8.8e-26 122.9 516 29.1
HanXRQChr02g0032681 Helianthus annuus HOM05D004831 ORTHO05D003975 1.1e-25 122.5 393 29.3
HanXRQChr05g0163461 Helianthus annuus HOM05D004831 ORTHO05D003975 7.4e-25 119.8 416 27.6
unitig_62.g23772 Utricularia gibba HOM05D004831 ORTHO05D003975 1.3e-24 119.0 269 35.3
MBI01_g10032_MAGBIO Magnolia biondii HOM05D004831 ORTHO05D003975 6.3e-24 116.7 437 29.1
Duzib160G0042 Durio zibethinus HOM05D004831 ORTHO05D003975 1.8e-23 115.2 424 30.4
Phvul.005G172500 Phaseolus vulgaris HOM05D004831 ORTHO05D003975 5.3e-23 113.6 286 34.3
EL10Ac9g21986 Beta vulgaris HOM05D004831 ORTHO05D003975 1.5e-22 112.1 451 29.7
Psat4g139520 Pisum sativum HOM05D004831 ORTHO05D003975 2.6e-22 111.3 531 26.6
Phvul.002G299500 Phaseolus vulgaris HOM05D004831 ORTHO05D003975 5.9e-22 110.2 358 31.3
Lalb_Chr15g0078831 Lupinus albus HOM05D004831 ORTHO05D003975 1.3e-21 109.0 325 33.8
arahy.Tifrunner.gnm1.ann1.5CE7DY Arachis hypogaea HOM05D004831 ORTHO05D003975 5.0e-21 107.1 467 29.8
arahy.Tifrunner.gnm1.ann1.NQW8T9 Arachis hypogaea HOM05D004831 ORTHO05D003975 1.1e-20 105.9 491 28.7
arahy.Tifrunner.gnm1.ann1.Y8U4CK Arachis hypogaea HOM05D004831 ORTHO05D003975 1.9e-20 105.1 371 33.4
FAN14G0810 Fragaria x ananassa HOM05D004831 ORTHO05D003975 1.9e-20 105.1 407 27.8
ATR0037G028 Amborella trichopoda HOM05D004831 ORTHO05D003975 5.5e-20 103.6 283 31.1
arahy.Tifrunner.gnm1.ann1.3B4S3M Arachis hypogaea HOM05D004831 ORTHO05D003975 7.2e-20 103.2 371 32.6
Lsat_1_v5_gn_9_45780 Lactuca sativa HOM05D004831 ORTHO05D003975 1.2e-19 102.4 311 31.5
Manes.04G121450 Manihot esculenta HOM05D004831 ORTHO05D003975 3.6e-19 100.9 472 27.8
AUR62011616 Chenopodium quinoa HOM05D004831 ORTHO05D003975 7.9e-19 99.8 558 26.2
FvH4_6g30920 Fragaria vesca HOM05D004831 ORTHO05D003975 3.0e-18 97.8 320 28.1
CARHR016160 Cardamine hirsuta HOM05D004831 ORTHO05D003975 5.2e-18 97.1 351 28.5
MD17G1197700 Malus domestica HOM05D004831 ORTHO05D003975 1.5e-17 95.5 414 29.0
THA.LOC104812471 Tarenaya hassleriana HOM05D004831 ORTHO05D003975 4.4e-17 94.0 347 30.0
FAN09G2060 Fragaria x ananassa HOM05D004831 ORTHO05D003975 7.4e-17 93.2 415 27.0
Sp1g13970 Schrenkiella parvula HOM05D004831 ORTHO05D003975 4.8e-16 90.5 377 26.8
BcaC05g25641 Brassica carinata HOM05D004831 ORTHO05D003975 8.2e-16 89.7 363 28.7
ClCG05G013830 Citrullus lanatus HOM05D004831 ORTHO05D003975 1.8e-15 88.6 414 25.6
AL1G27760 Arabidopsis lyrata HOM05D004831 ORTHO05D003975 7.0e-15 86.7 346 27.2
AT1G15660 Arabidopsis thaliana HOM05D004831 ORTHO05D003975 1.2e-14 85.9 516 24.6
AUR62016432 Chenopodium quinoa HOM05D004831 ORTHO05D003975 2.0e-14 85.1 435 27.6
A06p11680 Brassica napus HOM05D004831 ORTHO05D003975 3.5e-14 84.3 594 24.2
CDE04G1285 Ceratophyllum demersum HOM05D004831 ORTHO05D003975 3.5e-14 84.3 306 29.1
Haze_24989 Corylus avellana HOM05D004831 ORTHO05D003975 1.0e-13 82.8 180 36.1
BolC5t30118H Brassica oleracea HOM05D004831 ORTHO05D003975 1.3e-13 82.4 600 24.5
Sed0009949 Sechium edule HOM05D004831 ORTHO05D003975 3.8e-13 80.9 387 25.6
Ah.01g021180 Amaranthus hybridus HOM05D004831 ORTHO05D003975 6.5e-13 80.1 408 26.0
BraA06t24347Z Brassica rapa HOM05D004831 ORTHO05D003975 6.5e-13 80.1 594 24.6
Haze_16453 Corylus avellana HOM05D004831 ORTHO05D003975 6.5e-13 80.1 179 35.8
ECA247G1173 Erigeron canadensis HOM05D004831 ORTHO05D003975 1.1e-12 79.3 581 23.9
Thhalv10006918m.g Eutrema salsugineum HOM05D004831 ORTHO05D003975 1.9e-12 78.6 378 26.5
Aqoxy7G01849 Aquilegia oxysepala HOM05D004831 ORTHO05D003975 2.5e-12 78.2 571 24.9
BcaC05g25510 Brassica carinata HOM05D004831 ORTHO05D003975 2.5e-12 78.2 552 29.0
Carub.0001s1544 Capsella rubella HOM05D004831 ORTHO05D003975 9.4e-12 76.3 431 25.1
C05p13810 Brassica napus HOM05D004831 ORTHO05D012057 1.5e-09 68.9 515 24.3
Duzib192G1036 Durio zibethinus HOM05D004831 ORTHO05D003975 3.3e-09 67.8 424 27.8
FAN02G3038 Fragaria x ananassa HOM05D004831 ORTHO05D003975 7.5e-09 66.6 412 26.2
BcaB03g14531 Brassica carinata HOM05D004831 ORTHO05D017393 2.2e-08 65.1 224 28.6
Aa31LG7G300 Aethionema arabicum HOM05D004831 ORTHO05D003975 3.1e-07 61.2 211 32.7
Aa31LG7G290 Aethionema arabicum HOM05D004831 ORTHO05D003975 5.3e-07 60.5 145 35.2


User provided reference genes

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