Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_009543 Daucus carota HOM05D002492 ORTHO05D002621 6.8e-72 273.9 136 100.0
DCAR_001182 Daucus carota HOM05D002492 ORTHO05D002621 2.1e-49 199.1 135 73.3
DCAR_022549 Daucus carota HOM05D002492 ORTHO05D002621 9.3e-29 130.6 91 76.9
DCAR_024921 Daucus carota HOM05D002492 ORTHO05D002621 1.4e-16 90.1 129 36.4
DCAR_001527 Daucus carota HOM05D002492 ORTHO05D002621 1.2e-15 87.0 129 35.7
DCAR_025344 Daucus carota HOM05D002492 ORTHO05D002621 2.0e-15 86.3 130 34.6
DCAR_001185 Daucus carota HOM05D002492 ORTHO05D002621 2.6e-15 85.9 125 32.0
DCAR_022394 Daucus carota HOM05D002492 ORTHO05D002621 2.6e-15 85.9 136 33.8
DCAR_014850 Daucus carota HOM05D002492 ORTHO05D002621 4.5e-15 85.1 130 33.8
DCAR_018168 Daucus carota HOM05D002492 ORTHO05D002621 1.0e-14 84.0 128 33.6
DCAR_031239 Daucus carota HOM05D002492 ORTHO05D002621 1.0e-14 84.0 127 33.1
DCAR_031281 Daucus carota HOM05D002492 ORTHO05D002621 1.7e-14 83.2 124 36.3
DCAR_030141 Daucus carota HOM05D002492 ORTHO05D002621 2.2e-14 82.8 128 33.6
Hma1.2p1_0051F.1_g029450 Hydrangea macrophylla HOM05D000096 ORTHO05D000045 2.2e-14 82.8 131 33.6
DCAR_029961 Daucus carota HOM05D002492 ORTHO05D002621 2.9e-14 82.4 127 33.1
DCAR_005243 Daucus carota HOM05D002492 ORTHO05D002621 5.0e-14 81.6 138 29.0
DCAR_028586 Daucus carota HOM05D002492 ORTHO05D002621 5.0e-14 81.6 126 34.9
Peaxi162Scf00505g00016 Petunia axillaris HOM05D002907 ORTHO05D005554 6.5e-14 81.3 133 28.6
DCAR_016052 Daucus carota HOM05D002492 ORTHO05D002621 8.5e-14 80.9 127 33.9
DCAR_024727 Daucus carota HOM05D002492 ORTHO05D002621 8.5e-14 80.9 128 32.0
DCAR_022646 Daucus carota HOM05D002492 ORTHO05D002621 1.1e-13 80.5 125 31.2
DCAR_010813 Daucus carota HOM05D002492 ORTHO05D002621 2.5e-13 79.3 128 31.2
DCAR_005840 Daucus carota HOM05D002492 ORTHO05D002621 7.2e-13 77.8 116 36.2
DCAR_028727 Daucus carota HOM05D002492 ORTHO05D002621 7.2e-13 77.8 116 36.2
DCAR_000918 Daucus carota HOM05D002492 ORTHO05D002621 9.4e-13 77.4 126 33.3
DCAR_010167 Daucus carota HOM05D002492 ORTHO05D002621 9.4e-13 77.4 127 30.7
Peaxi162Scf01370g00020 Petunia axillaris HOM05D002907 ORTHO05D005554 9.4e-13 77.4 133 29.3
DCAR_031670 Daucus carota HOM05D002492 ORTHO05D002621 1.2e-12 77.0 133 28.6
DCAR_024134 Daucus carota HOM05D002492 ORTHO05D002621 1.6e-12 76.6 134 31.3
DCAR_028351 Daucus carota HOM05D002492 ORTHO05D002621 1.6e-12 76.6 128 28.9
DCAR_015233 Daucus carota HOM05D002492 ORTHO05D002621 2.1e-12 76.3 134 28.4
DCAR_020954 Daucus carota HOM05D002492 ORTHO05D002621 2.1e-12 76.3 129 31.0
DCAR_024736 Daucus carota HOM05D002492 ORTHO05D002621 2.1e-12 76.3 129 31.0
QL07p007200 Quercus lobata HOM05D000096 ORTHO05D000045 2.1e-12 76.3 133 29.3
Peaxi162Scf00168g01413 Petunia axillaris HOM05D002907 ORTHO05D005554 2.7e-12 75.9 135 27.4
DCAR_031648 Daucus carota HOM05D002492 ORTHO05D002621 3.6e-12 75.5 123 31.7
Nitab4.5_0026714g0010 Nicotiana tabacum HOM05D002907 ORTHO05D005554 3.6e-12 75.5 131 30.5
Peaxi162Scf00115g00007 Petunia axillaris HOM05D002907 ORTHO05D000065 6.1e-12 74.7 133 29.3
DCAR_010812 Daucus carota HOM05D002492 ORTHO05D002621 1.4e-11 73.6 125 30.4
DCAR_028309 Daucus carota HOM05D002492 ORTHO05D002621 1.4e-11 73.6 104 32.7
DCAR_010336 Daucus carota HOM05D002492 ORTHO05D002621 1.8e-11 73.2 135 32.6
Nitab4.5_0002746g0030 Nicotiana tabacum HOM05D002907 ORTHO05D000065 1.8e-11 73.2 133 29.3
DCAR_024728 Daucus carota HOM05D002492 ORTHO05D002621 3.9e-11 72.0 125 29.6
DCAR_002003 Daucus carota HOM05D000798 ORTHO05D002621 6.7e-11 71.2 129 27.9
DCAR_028352 Daucus carota HOM05D000003 ORTHO05D000004 8.8e-11 70.9 127 30.7
Peaxi162Scf00661g00421 Petunia axillaris HOM05D002907 ORTHO05D005554 8.8e-11 70.9 125 28.0
Peaxi162Scf00386g00927 Petunia axillaris HOM05D002907 ORTHO05D005554 2.6e-10 69.3 133 27.8
Peaxi162Scf00005g02517 Petunia axillaris HOM05D002907 ORTHO05D005554 4.4e-10 68.6 133 27.1
DCAR_005968 Daucus carota HOM05D002492 ORTHO05D002621 5.7e-10 68.2 134 30.6
DCAR_020287 Daucus carota HOM05D002492 ORTHO05D002621 5.7e-10 68.2 134 30.6
DCAR_026147 Daucus carota HOM05D002492 ORTHO05D002621 5.7e-10 68.2 134 30.6
DCAR_020135 Daucus carota HOM05D002907 ORTHO05D005554 7.4e-10 67.8 132 27.3
DCAR_027468 Daucus carota HOM05D002492 ORTHO05D002621 7.4e-10 67.8 124 30.6
QL03p025410 Quercus lobata HOM05D000005 ORTHO05D000065 9.7e-10 67.4 132 26.5
DCAR_029962 Daucus carota HOM05D002492 ORTHO05D002621 1.3e-09 67.0 125 30.4
DCAR_016811 Daucus carota HOM05D002492 ORTHO05D002621 1.7e-09 66.6 90 35.6
DCAR_024352 Daucus carota HOM05D002492 ORTHO05D002621 1.7e-09 66.6 132 31.1
DCAR_031400 Daucus carota HOM05D000106 ORTHO05D002621 2.2e-09 66.2 135 28.1
Hma1.2p1_0045F.1_g026410 Hydrangea macrophylla HOM05D000096 ORTHO05D000045 2.8e-09 65.9 130 26.9
Peaxi162Scf00715g00062 Petunia axillaris HOM05D002907 ORTHO05D000065 2.8e-09 65.9 129 27.1
DCAR_010867 Daucus carota HOM05D002492 ORTHO05D002621 3.7e-09 65.5 134 32.1
DCAR_026108 Daucus carota HOM05D002492 ORTHO05D002621 3.7e-09 65.5 127 29.9
DCAR_031392 Daucus carota HOM05D002492 ORTHO05D002621 3.7e-09 65.5 117 27.4
DCAR_017541 Daucus carota HOM05D002492 ORTHO05D002621 6.3e-09 64.7 134 27.6
DCAR_031396 Daucus carota HOM05D002492 ORTHO05D002621 6.3e-09 64.7 134 27.6
FAN16G1404 Fragaria x ananassa HOM05D006849 ORTHO05D003348 6.3e-09 64.7 130 26.2
Peaxi162Scf00635g00615 Petunia axillaris HOM05D002907 ORTHO05D005554 6.3e-09 64.7 133 26.3
arahy.Tifrunner.gnm1.ann1.AKH4BK Arachis hypogaea HOM05D000353 ORTHO05D000174 8.2e-09 64.3 129 31.8
arahy.Tifrunner.gnm1.ann1.CPRZ31 Arachis hypogaea HOM05D000353 ORTHO05D000174 8.2e-09 64.3 129 31.8
arahy.Tifrunner.gnm1.ann1.J9NJUF Arachis hypogaea HOM05D000353 ORTHO05D000174 8.2e-09 64.3 129 31.8
arahy.Tifrunner.gnm1.ann1.LSFF47 Arachis hypogaea HOM05D000353 ORTHO05D000174 8.2e-09 64.3 129 31.8
arahy.Tifrunner.gnm1.ann1.Y6YSHD Arachis hypogaea HOM05D000353 ORTHO05D000174 8.2e-09 64.3 129 31.8
DCAR_016062 Daucus carota HOM05D002492 ORTHO05D002621 8.2e-09 64.3 125 27.2
DCAR_031412 Daucus carota HOM05D002492 ORTHO05D002621 8.2e-09 64.3 134 26.1
DCAR_005612 Daucus carota HOM05D002492 ORTHO05D002621 1.1e-08 63.9 137 28.5
Solyc10g050370.2 Solanum lycopersicum HOM05D002907 ORTHO05D005554 1.4e-08 63.5 133 28.6
DCAR_021272 Daucus carota HOM05D002492 ORTHO05D002621 1.8e-08 63.2 127 26.8
arahy.Tifrunner.gnm1.ann1.IYP2GG Arachis hypogaea HOM05D000353 ORTHO05D000174 2.4e-08 62.8 129 31.0
DCAR_024285 Daucus carota HOM05D002492 ORTHO05D002621 2.4e-08 62.8 135 32.6
Sopen09g023780 Solanum pennellii HOM05D002907 ORTHO05D005554 2.4e-08 62.8 133 28.6
Sopen11g022000 Solanum pennellii HOM05D002907 ORTHO05D005554 2.4e-08 62.8 133 28.6
DCAR_002614 Daucus carota HOM05D002492 ORTHO05D002621 3.1e-08 62.4 135 32.6
DCAR_017737 Daucus carota HOM05D002492 ORTHO05D002621 3.1e-08 62.4 122 28.7
QL06p039579 Quercus lobata HOM05D002907 ORTHO05D000065 3.1e-08 62.4 134 24.6
DCAR_002704 Daucus carota HOM05D002492 ORTHO05D002621 4.1e-08 62.0 131 26.7
DCAR_017314 Daucus carota HOM05D002492 ORTHO05D002621 4.1e-08 62.0 101 32.7
DCAR_024329 Daucus carota HOM05D002492 ORTHO05D002621 4.1e-08 62.0 130 30.8
DCAR_016061 Daucus carota HOM05D002492 ORTHO05D002621 5.3e-08 61.6 77 36.4
DCAR_017486 Daucus carota HOM05D002492 ORTHO05D002621 5.3e-08 61.6 115 30.4
DCAR_031404 Daucus carota HOM05D002492 ORTHO05D002621 5.3e-08 61.6 134 26.9
BolC2t12325H Brassica oleracea HOM05D000313 ORTHO05D000065 7.0e-08 61.2 134 31.3
DCAR_031642 Daucus carota HOM05D002492 ORTHO05D002621 7.0e-08 61.2 133 27.1
Peaxi162Scf00073g02336 Petunia axillaris HOM05D002907 ORTHO05D005554 7.0e-08 61.2 118 26.3
DCAR_018000 Daucus carota HOM05D002492 ORTHO05D002621 9.1e-08 60.8 133 29.3
DCAR_008877 Daucus carota HOM05D002492 ORTHO05D002621 1.5e-07 60.1 134 26.1
DCAR_024355 Daucus carota HOM05D002492 ORTHO05D002621 1.5e-07 60.1 130 26.9
DCAR_024381 Daucus carota HOM05D002492 ORTHO05D002621 1.5e-07 60.1 138 25.4
DCAR_028510 Daucus carota HOM05D002492 ORTHO05D002621 1.5e-07 60.1 79 32.9
Solyc10g074430.2 Solanum lycopersicum HOM05D002907 ORTHO05D005554 1.5e-07 60.1 130 28.5
DCAR_030129 Daucus carota HOM05D002492 ORTHO05D002621 2.0e-07 59.7 135 30.4
DCAR_010634 Daucus carota HOM05D002492 ORTHO05D002621 2.6e-07 59.3 129 29.5
Solyc07g017280.3 Solanum lycopersicum HOM05D002907 ORTHO05D005554 2.6e-07 59.3 133 27.1
DCAR_031459 Daucus carota HOM05D002492 ORTHO05D002621 3.4e-07 58.9 127 26.0
BcaC09g48338 Brassica carinata HOM05D000313 ORTHO05D000065 4.5e-07 58.5 134 30.6
SGA_v2.0_scaffold69G23109 Striga asiatica HOM05D011787 ORTHO05D008317 4.5e-07 58.5 135 25.2
DCAR_010788 Daucus carota HOM05D002492 ORTHO05D002621 5.9e-07 58.2 127 27.6
DCAR_022643 Daucus carota HOM05D002492 ORTHO05D002621 5.9e-07 58.2 38 65.8
DCAR_023749 Daucus carota HOM05D002492 ORTHO05D002621 5.9e-07 58.2 137 28.5
DCAR_027466 Daucus carota HOM05D002492 ORTHO05D002621 5.9e-07 58.2 79 32.9
A01p07440 Brassica napus HOM05D000313 ORTHO05D000065 7.7e-07 57.8 134 30.6
A08p13660 Brassica napus HOM05D000313 ORTHO05D000065 7.7e-07 57.8 134 30.6
DCAR_010411 Daucus carota HOM05D002492 ORTHO05D002621 7.7e-07 57.8 134 25.4
Medtr5g078250 Medicago truncatula HOM05D000353 ORTHO05D000174 7.7e-07 57.8 104 28.8
BraA08t34530Z Brassica rapa HOM05D000313 ORTHO05D000065 1.0e-06 57.4 134 29.9
DCAR_010630 Daucus carota HOM05D002492 ORTHO05D002621 1.0e-06 57.4 135 28.9
DCAR_017280 Daucus carota HOM05D002492 ORTHO05D002621 1.0e-06 57.4 134 26.1
Thhalv10005644m.g Eutrema salsugineum HOM05D000313 ORTHO05D000065 1.0e-06 57.4 121 28.1
Medtr6g052340 Medicago truncatula HOM05D002465 ORTHO05D005308 1.0e-06 57.4 121 28.9
DCAR_031431 Daucus carota HOM05D002492 ORTHO05D002621 1.3e-06 57.0 125 27.2
BcaB07g33685 Brassica carinata HOM05D000313 ORTHO05D000065 1.7e-06 56.6 128 29.7
BcaB07g33686 Brassica carinata HOM05D000313 ORTHO05D000065 1.7e-06 56.6 128 29.7
Medtr8g059025 Medicago truncatula HOM05D000353 ORTHO05D000174 1.7e-06 56.6 105 28.6
RcHm_v2.0_Chr2g0150581 Rosa chinensis HOM05D007856 ORTHO05D003348 1.7e-06 56.6 130 23.8
TPR.G8666 Trifolium pratense HOM05D000096 ORTHO05D000045 1.7e-06 56.6 125 31.2
DCAR_028093 Daucus carota HOM05D002492 ORTHO05D002621 2.2e-06 56.2 127 26.0
Lj3g0013474 Lotus japonicus HOM05D000353 ORTHO05D000174 2.2e-06 56.2 128 25.8
DCAR_017891 Daucus carota HOM05D002492 ORTHO05D002621 2.9e-06 55.8 115 28.7
DCAR_031756 Daucus carota HOM05D002492 ORTHO05D002621 2.9e-06 55.8 113 27.4
DCAR_031408 Daucus carota HOM05D002492 ORTHO05D002621 3.8e-06 55.5 79 31.6
RcHm_v2.0_Chr5g0010461 Rosa chinensis HOM05D006849 ORTHO05D003348 3.8e-06 55.5 122 23.8
TPR.G7703 Trifolium pratense HOM05D000353 ORTHO05D000174 3.8e-06 55.5 101 31.7
DCAR_021161 Daucus carota HOM05D002492 ORTHO05D002621 5.0e-06 55.1 134 26.9
DCAR_031399 Daucus carota HOM05D002492 ORTHO05D002621 5.0e-06 55.1 79 32.9
DCAR_031855 Daucus carota HOM05D002492 ORTHO05D002621 5.0e-06 55.1 79 32.9
Medtr1g075850 Medicago truncatula HOM05D000353 ORTHO05D000174 5.0e-06 55.1 130 26.2
A06p31400 Brassica napus HOM05D000313 ORTHO05D000065 6.5e-06 54.7 127 29.9
A09p40830 Brassica napus HOM05D000313 ORTHO05D000065 6.5e-06 54.7 127 29.9
DCAR_017479 Daucus carota HOM05D002492 ORTHO05D002621 6.5e-06 54.7 134 27.6
QL05p044516 Quercus lobata HOM05D002907 ORTHO05D000065 6.5e-06 54.7 129 23.3
QL10p011037 Quercus lobata HOM05D002907 ORTHO05D000065 6.5e-06 54.7 135 23.7
TWI31G1318 Tripterygium wilfordii HOM05D002907 ORTHO05D000065 6.5e-06 54.7 133 24.8
C09p62680 Brassica napus HOM05D000313 ORTHO05D000065 8.5e-06 54.3 133 29.3
DCAR_027578 Daucus carota HOM05D002492 ORTHO05D002621 8.5e-06 54.3 111 26.1
DCAR_028506 Daucus carota HOM05D002492 ORTHO05D002621 8.5e-06 54.3 76 30.3


User provided reference genes

Program Settings