Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_009503 Daucus carota HOM05D006215 ORTHO05D007719 2.5e-107 392.1 199 100.0
Sopen04g035480 Solanum pennellii HOM05D006215 ORTHO05D007719 3.7e-82 308.5 177 81.4
Potri.002G018100 Populus trichocarpa HOM05D006215 ORTHO05D007719 6.2e-82 307.8 179 83.2
Solyc04g081850.4 Solanum lycopersicum HOM05D006215 ORTHO05D007719 1.4e-81 306.6 177 80.8
Duzib041G0142 Durio zibethinus HOM05D006215 ORTHO05D007719 1.8e-81 306.2 185 80.5
PGSC0003DMG400009949 Solanum tuberosum HOM05D006215 ORTHO05D007719 3.1e-81 305.4 177 80.8
Lj4C18G8 Lonicera japonica HOM05D000114 ORTHO05D009837 9.0e-81 303.9 176 81.8
CSS0039588 Camellia sinensis var. sinensis HOM05D006215 ORTHO05D007719 1.2e-80 303.5 175 84.0
CSS0005676 Camellia sinensis var. sinensis HOM05D006215 ORTHO05D007719 3.4e-80 302.0 175 83.4
Cpa.g.sc26.282 Carica papaya HOM05D006215 ORTHO05D007719 3.4e-80 302.0 178 80.9
QL02p012562 Quercus lobata HOM05D006215 ORTHO05D007719 3.4e-80 302.0 176 82.4
Gohir.D01G096200 Gossypium hirsutum HOM05D006215 ORTHO05D007719 5.8e-80 301.2 195 76.9
Gohir.A01G109400 Gossypium hirsutum HOM05D006215 ORTHO05D007719 1.7e-79 299.7 195 76.9
MSTRG.1158 Avicennia marina HOM05D006215 ORTHO05D007719 2.9e-79 298.9 174 81.6
Thecc.08G049400 Theobroma cacao HOM05D006215 ORTHO05D007719 2.9e-79 298.9 182 79.1
Dinv31883 Davidia involucrata HOM05D006215 ORTHO05D007719 4.9e-79 298.1 192 77.6
Gorai.002G121700 Gossypium raimondii HOM05D006215 ORTHO05D007719 4.9e-79 298.1 195 75.9
Manes.18G010300 Manihot esculenta HOM05D006215 ORTHO05D007719 6.5e-79 297.7 174 81.6
Prupe.4G165400 Prunus persica HOM05D006215 ORTHO05D007719 6.5e-79 297.7 175 80.6
Migut.C00887 Erythranthe guttata HOM05D006215 ORTHO05D007719 1.4e-78 296.6 173 81.5
Lalb_Chr23g0266051 Lupinus albus HOM05D006215 ORTHO05D007719 1.4e-78 296.6 183 77.0
GSVIVG01009974001 Vitis vinifera HOM05D006215 ORTHO05D009429 1.9e-78 296.2 174 81.0
COL.COLO4_26102 Corchorus olitorius HOM05D006215 ORTHO05D007719 2.5e-78 295.8 175 79.4
arahy.Tifrunner.gnm1.ann1.89BLSN Arachis hypogaea HOM05D006215 ORTHO05D007719 9.3e-78 293.9 173 80.9
CAN.G311.58 Capsicum annuum HOM05D006215 ORTHO05D007719 1.6e-77 293.1 176 79.5
Glyma.06G021900 Glycine max HOM05D006215 ORTHO05D007719 1.6e-77 293.1 182 79.7
MD03G1242500 Malus domestica HOM05D006215 ORTHO05D007719 1.6e-77 293.1 175 80.0
Phvul.009G018900 Phaseolus vulgaris HOM05D006215 ORTHO05D007719 2.7e-77 292.4 185 76.2
Cfa013993 Carpinus fangiana HOM05D006215 ORTHO05D007719 3.5e-77 292.0 176 80.1
vmacro21863 Vaccinium macrocarpon HOM05D006215 ORTHO05D007719 4.6e-77 291.6 171 81.9
VMungo1215G3215 Vigna mungo HOM05D006215 ORTHO05D007719 4.6e-77 291.6 183 76.5
Ciclev10002478m.g Citrus clementina HOM05D006215 ORTHO05D007719 6.0e-77 291.2 183 77.6
SGA_v2.0_scaffold292G47375 Striga asiatica HOM05D006215 ORTHO05D007719 6.0e-77 291.2 176 79.0
FAN11G1504 Fragaria x ananassa HOM05D006215 ORTHO05D007719 7.9e-77 290.8 175 79.4
Lsat_1_v5_gn_8_29640 Lactuca sativa HOM05D006215 ORTHO05D007719 7.9e-77 290.8 174 79.3
Rhsim06G0017400 Rhododendron simsii HOM05D006215 ORTHO05D007719 3.0e-76 288.9 177 80.2
Glyma.04G021700 Glycine max HOM05D006215 ORTHO05D007719 3.9e-76 288.5 182 75.3
Medtr3g114470 Medicago truncatula HOM05D006215 ORTHO05D007719 6.7e-76 287.7 181 75.7
RcHm_v2.0_Chr5g0031011 Rosa chinensis HOM05D006215 ORTHO05D007719 6.7e-76 287.7 186 75.8
FAN25G2739 Fragaria x ananassa HOM05D006215 ORTHO05D007719 1.9e-75 286.2 175 78.3
Atru.chr13.240 Acer truncatum HOM05D006215 ORTHO05D007719 2.5e-75 285.8 188 77.7
TWI12G0400 Tripterygium wilfordii HOM05D006215 ORTHO05D007719 3.3e-75 285.4 177 79.1
Sabra02G0014400 Salix brachista HOM05D006215 ORTHO05D007719 5.7e-75 284.6 220 67.3
Psat5g012560 Pisum sativum HOM05D006215 ORTHO05D007719 7.4e-75 284.3 189 73.0
Lj1g0006385 Lotus japonicus HOM05D006215 ORTHO05D007719 3.7e-74 282.0 187 72.7
HanXRQChr13g0386921 Helianthus annuus HOM05D006215 ORTHO05D007719 6.3e-74 281.2 174 75.9
CANSAT25G1322 Cannabis sativa HOM05D006215 ORTHO05D007719 8.2e-74 280.8 179 77.1
Ca_15473_v3 Cicer arietinum L. HOM05D006215 ORTHO05D007719 1.1e-73 280.4 185 74.1
CsaV3_3G046060 Cucumis sativus L. HOM05D006215 ORTHO05D007719 1.1e-73 280.4 176 75.6
A07p41490 Brassica napus HOM05D006215 ORTHO05D007719 2.4e-73 279.3 177 75.1
BraA07t31681Z Brassica rapa HOM05D006215 ORTHO05D007719 2.4e-73 279.3 177 75.1
Sed0008956 Sechium edule HOM05D006215 ORTHO05D007719 5.3e-73 278.1 173 75.1
SalBow7G2905 Salvia bowleyana HOM05D006215 ORTHO05D007719 1.2e-72 276.9 209 68.4
Nn5g30812 Nelumbo nucifera HOM05D006215 ORTHO05D007719 1.5e-72 276.6 206 67.0
Oeu033622.1 Olea europaea HOM05D006215 ORTHO05D007719 2.0e-72 276.2 175 76.6
EL10Ac1g02129 Beta vulgaris HOM05D006215 ORTHO05D007719 3.4e-72 275.4 193 71.0
BcaB02g07052 Brassica carinata HOM05D006215 ORTHO05D007719 3.4e-72 275.4 184 73.9
CANSAT80G2378 Cannabis sativa HOM05D006215 ORTHO05D007719 3.4e-72 275.4 183 73.2
ECA233G5922 Erigeron canadensis HOM05D000114 ORTHO05D000075 7.6e-72 274.2 174 75.9
BcaC08g45544 Brassica carinata HOM05D006215 ORTHO05D007719 1.0e-71 273.9 184 73.9
C06p32240 Brassica napus HOM05D006215 ORTHO05D007719 1.0e-71 273.9 184 73.9
BolC6t38347H Brassica oleracea HOM05D006215 ORTHO05D007719 1.0e-71 273.9 184 73.9
Thhalv10019087m.g Eutrema salsugineum HOM05D006215 ORTHO05D007719 1.7e-71 273.1 171 76.6
A07p28630 Brassica napus HOM05D006215 ORTHO05D007719 3.8e-71 271.9 173 76.9
BraA07t30504Z Brassica rapa HOM05D006215 ORTHO05D007719 3.8e-71 271.9 173 76.9
BcaB05g24966 Brassica carinata HOM05D006215 ORTHO05D007719 5.0e-71 271.6 184 73.4
AT1G75980 Arabidopsis thaliana HOM05D006215 ORTHO05D007719 6.5e-71 271.2 170 77.1
C06p49900 Brassica napus HOM05D006215 ORTHO05D007719 1.1e-70 270.4 175 73.7
AL2G36000 Arabidopsis lyrata HOM05D006215 ORTHO05D007719 1.9e-70 269.6 169 76.9
Carub.0002s2287 Capsella rubella HOM05D006215 ORTHO05D007719 1.9e-70 269.6 170 77.1
unitig_32.g11202 Utricularia gibba HOM05D006215 ORTHO05D007719 1.9e-70 269.6 186 70.4
Aqoxy5G01831 Aquilegia oxysepala HOM05D006215 ORTHO05D007719 5.5e-70 268.1 175 72.0
HPP92_025438 Vanilla planifolia HOM05D006215 ORTHO05D007719 7.2e-70 267.7 179 70.9
BcaC08g47309 Brassica carinata HOM05D006215 ORTHO05D007719 9.3e-70 267.3 175 73.1
THA.LOC104811433 Tarenaya hassleriana HOM05D006215 ORTHO05D007719 1.6e-69 266.5 197 68.5
Sp5g31100 Schrenkiella parvula HOM05D006215 ORTHO05D007719 3.6e-69 265.4 170 74.7
CARHR069510 Cardamine hirsuta HOM05D006215 ORTHO05D007719 1.3e-68 263.5 183 69.9
PSO339G6481 Papaver somniferum HOM05D006215 ORTHO05D007719 6.7e-68 261.2 180 73.3
Hund01696 Selenicereus undatus HOM05D006215 ORTHO05D007719 6.7e-68 261.2 177 69.5
MELO3C003734.2 Cucumis melo HOM05D006215 ORTHO05D007719 1.5e-67 260.0 161 77.0
PSO384G0480 Papaver somniferum HOM05D006215 ORTHO05D007719 3.3e-67 258.8 187 71.7
Nitab4.5_0004361g0040 Nicotiana tabacum HOM05D006215 ORTHO05D007719 4.3e-67 258.5 141 86.5
AUR62013912 Chenopodium quinoa HOM05D006215 ORTHO05D007719 2.8e-66 255.8 169 71.0
Zm00001eb209250 Zea mays HOM05D006215 ORTHO05D007719 4.8e-66 255.0 188 64.4
Rhsim06G0015300 Rhododendron simsii HOM05D006215 ORTHO05D007719 2.9e-63 245.7 186 71.0
CDE04G3084 Ceratophyllum demersum HOM05D006215 ORTHO05D007719 1.6e-61 240.0 168 70.2
ClCG05G015490 Citrullus lanatus HOM05D006215 ORTHO05D007719 2.3e-60 236.1 176 68.2
FvH4_3g18360 Fragaria vesca HOM05D006215 ORTHO05D007719 2.3e-60 236.1 145 76.6
CiPaw.07G144900 Carya illinoinensis HOM05D006215 ORTHO05D007719 3.9e-60 235.3 146 78.1
Actinidia15453 Actinidia chinensis HOM05D006215 ORTHO05D007719 6.7e-60 234.6 176 67.6
Peaxi162Scf00860g00212 Petunia axillaris HOM05D006215 ORTHO05D007719 9.7e-59 230.7 184 64.7
Eucgr.F03725 Eucalyptus grandis HOM05D006215 ORTHO05D007719 1.3e-58 230.3 148 75.0
TPR.G38171 Trifolium pratense HOM05D006215 ORTHO05D007719 3.7e-58 228.8 133 82.0
Os02g0120400 Oryza sativa ssp. japonica HOM05D006215 ORTHO05D007719 3.4e-56 222.2 140 72.1
PGR083G2507 Punica granatum HOM05D006215 ORTHO05D007719 2.2e-55 219.5 189 61.9
AUR62018279 Chenopodium quinoa HOM05D006215 ORTHO05D007719 1.7e-50 203.4 167 59.3
ATR1088G027 Amborella trichopoda HOM05D006215 ORTHO05D007719 4.8e-50 201.8 153 69.3
TAR625G0502 Trochodendron aralioides HOM05D006215 ORTHO05D007719 1.1e-49 200.7 144 68.1
arahy.Tifrunner.gnm1.ann1.SEC0EX Arachis hypogaea HOM05D006215 ORTHO05D007719 2.4e-49 199.5 196 57.1
Duzib093G1443 Durio zibethinus HOM05D006215 ORTHO05D007719 2.6e-48 196.1 127 76.4
Mapoly0001s0313 Marchantia polymorpha HOM05D006215 ORTHO05D007719 3.8e-47 192.2 167 55.1
Actinidia17011 Actinidia chinensis HOM05D006215 ORTHO05D007719 1.1e-46 190.7 159 61.6
Pp3c20_3890 Physcomitrium patens HOM05D006215 ORTHO05D007719 2.3e-44 183.0 165 52.1
SMO367G0408 Selaginella moellendorffii HOM05D006215 ORTHO05D007719 1.2e-43 180.6 178 50.0
Sc15g0004750 Simmondsia chinensis HOM05D006215 ORTHO05D007719 9.7e-43 177.6 127 67.7
Aa31LG4G6130 Aethionema arabicum HOM05D006215 ORTHO05D007719 1.3e-42 177.2 176 54.0
FAN21G0515 Fragaria x ananassa HOM05D006215 ORTHO05D007719 8.2e-42 174.5 175 53.7
Cc10_g01280 Coffea canephora HOM05D006215 ORTHO05D007719 1.2e-40 170.6 93 81.7
BolC6t40028H Brassica oleracea HOM05D006215 ORTHO05D007719 1.2e-35 154.1 124 64.5
SHI08014 Sapria himalayana HOM05D006215 ORTHO05D007719 7.5e-35 151.4 127 59.8
Haze_22683 Corylus avellana HOM05D006215 ORTHO05D007719 6.3e-34 148.3 107 69.2
CANSAT25G3730 Cannabis sativa HOM05D006215 ORTHO05D007719 1.1e-33 147.5 99 70.7
Eucgr.F03727 Eucalyptus grandis HOM05D006215 ORTHO05D007719 1.3e-31 140.6 87 77.0
Ah.06g187190 Amaranthus hybridus HOM05D006215 ORTHO05D007719 6.5e-31 138.3 137 56.2
Cc10_g01290 Coffea canephora HOM05D006215 ORTHO05D007719 8.0e-29 131.3 84 73.8
CBR_g54848 Chara braunii HOM05D006215 ORTHO05D007719 2.4e-25 119.8 128 50.8
SEGI_18034 Sequoiadendron giganteum HOM05D006215 ORTHO05D007719 2.0e-24 116.7 85 62.4
Carub.0005s0222 Capsella rubella HOM05D006215 ORTHO05D007719 1.0e-23 114.4 71 83.1
Medtr6g083100 Medicago truncatula HOM05D006215 ORTHO05D007719 5.0e-23 112.1 121 53.7
Glyma.02G160800 Glycine max HOM05D006215 ORTHO05D007719 3.3e-22 109.4 63 74.6
AagrBONN_evm.TU.Sc2ySwM_117.1002 Anthoceros agrestis HOM05D006215 ORTHO05D007719 9.5e-22 107.8 124 46.0
BcaC03g15638 Brassica carinata HOM05D006215 ORTHO05D007719 3.0e-20 102.8 99 59.6
Lsat_1_v5_gn_4_111221 Lactuca sativa HOM05D006215 ORTHO05D007719 2.7e-16 89.7 57 73.7
C02p33520 Brassica napus HOM05D006215 ORTHO05D007719 3.5e-16 89.4 71 69.0
BolC2t09353H Brassica oleracea HOM05D006215 ORTHO05D007719 4.3e-14 82.4 71 64.8
MCO13G478 Micromonas commoda HOM05D006215 ORTHO05D007719 5.2e-12 75.5 109 37.6
A02p20380 Brassica napus HOM05D006215 ORTHO05D007719 5.8e-11 72.0 48 75.0
MD11G1262900 Malus domestica HOM05D006215 ORTHO05D007719 2.4e-09 66.6 36 86.1
TPR.G38152 Trifolium pratense HOM05D006215 ORTHO05D007719 6.0e-08 62.0 51 54.9


User provided reference genes

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