Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_009498 Daucus carota HOM05D004095 ORTHO05D003197 2.5e-188 662.1 378 100.0
Cc10_g01420 Coffea canephora HOM05D004095 ORTHO05D003197 3.9e-32 143.3 382 37.7
MSTRG.1174 Avicennia marina HOM05D004095 ORTHO05D003197 4.0e-29 133.3 399 35.8
Dinv31870 Davidia involucrata HOM05D004095 ORTHO05D003197 3.4e-28 130.2 386 38.6
CSS0032179 Camellia sinensis var. sinensis HOM05D004095 ORTHO05D003197 3.7e-27 126.7 391 34.3
CSS0006390 Camellia sinensis var. sinensis HOM05D004095 ORTHO05D003197 4.9e-27 126.3 391 34.5
MSTRG.25264 Avicennia marina HOM05D004095 ORTHO05D003197 6.0e-25 119.4 387 39.5
Nn6g31993 Nelumbo nucifera HOM05D004095 ORTHO05D003197 1.7e-24 117.9 386 32.6
Hma1.2p1_0023F.1_g015650 Hydrangea macrophylla HOM05D004095 ORTHO05D003197 2.5e-23 114.0 286 35.0
Lj4A21T58 Lonicera japonica HOM05D004095 ORTHO05D003197 2.5e-23 114.0 396 35.6
EL10Ac3g06641 Beta vulgaris HOM05D004095 ORTHO05D003197 3.3e-23 113.6 411 34.1
Oeu061977.1 Olea europaea HOM05D004095 ORTHO05D003197 1.2e-22 111.7 403 35.0
CSS0036757 Camellia sinensis var. sinensis HOM05D004095 ORTHO05D003197 1.6e-22 111.3 330 30.9
ClCG08G014140 Citrullus lanatus HOM05D004095 ORTHO05D003197 3.6e-22 110.2 387 33.3
Eucgr.I02328 Eucalyptus grandis HOM05D004095 ORTHO05D003197 4.0e-21 106.7 379 33.2
Duzib041G0318 Durio zibethinus HOM05D004095 ORTHO05D003197 5.2e-21 106.3 381 33.3
SalBow7G2790 Salvia bowleyana HOM05D004095 ORTHO05D003197 1.2e-20 105.1 410 32.9
Cfa007004 Carpinus fangiana HOM05D004095 ORTHO05D003197 1.5e-20 104.8 381 34.1
Duzib187G0006 Durio zibethinus HOM05D004095 ORTHO05D003197 1.5e-20 104.8 379 31.7
SGA_v2.0_scaffold11G05941 Striga asiatica HOM05D004095 ORTHO05D003197 2.0e-20 104.4 381 31.0
CAN.G1517.6 Capsicum annuum HOM05D004095 ORTHO05D003197 2.6e-20 104.0 378 32.8
Peaxi162Scf00860g00422 Petunia axillaris HOM05D004095 ORTHO05D003197 2.6e-20 104.0 379 33.0
CAN.G311.49 Capsicum annuum HOM05D004095 ORTHO05D003197 9.9e-20 102.1 384 35.9
AUR62040566 Chenopodium quinoa HOM05D004095 ORTHO05D003197 1.3e-19 101.7 378 31.0
Migut.C00862 Erythranthe guttata HOM05D004095 ORTHO05D003197 1.7e-19 101.3 415 32.8
vmacro07570 Vaccinium macrocarpon HOM05D004095 ORTHO05D003197 1.7e-19 101.3 408 36.0
Duzib093G1456 Durio zibethinus HOM05D004095 ORTHO05D003197 2.2e-19 100.9 395 29.1
TAR381G0731 Trochodendron aralioides HOM05D004095 ORTHO05D003197 2.9e-19 100.5 390 30.8
MELO3C011353.2 Cucumis melo HOM05D004095 ORTHO05D003197 4.9e-19 99.8 392 36.7
Sc15g0004790 Simmondsia chinensis HOM05D004095 ORTHO05D003197 4.9e-19 99.8 394 35.0
Actinidia15439 Actinidia chinensis HOM05D004095 ORTHO05D003197 6.4e-19 99.4 180 51.7
Potri.002G019200 Populus trichocarpa HOM05D004095 ORTHO05D003197 6.4e-19 99.4 388 27.1
Hund01666 Selenicereus undatus HOM05D004095 ORTHO05D003197 6.4e-19 99.4 395 34.9
Solyc04g081730.3 Solanum lycopersicum HOM05D004095 ORTHO05D003197 1.1e-18 98.6 388 35.8
CsaV3_2G024280 Cucumis sativus L. HOM05D004095 ORTHO05D003197 1.4e-18 98.2 392 32.7
Sopen04g035350 Solanum pennellii HOM05D004095 ORTHO05D003197 1.9e-18 97.8 388 36.1
Actinidia17001 Actinidia chinensis HOM05D004095 ORTHO05D003197 2.4e-18 97.4 183 47.5
PGSC0003DMG400009946 Solanum tuberosum HOM05D004095 ORTHO05D003197 4.1e-18 96.7 385 34.0
Oeu026642.1 Olea europaea HOM05D004095 ORTHO05D003197 7.1e-18 95.9 305 30.8
Oeu007365.1 Olea europaea HOM05D004095 ORTHO05D003197 9.2e-18 95.5 293 30.7
TWI12G1115 Tripterygium wilfordii HOM05D004095 ORTHO05D003197 1.2e-17 95.1 386 31.9
TAR376G0784 Trochodendron aralioides HOM05D004095 ORTHO05D003197 1.6e-17 94.7 380 32.6
AUR62041467 Chenopodium quinoa HOM05D004095 ORTHO05D003197 2.1e-17 94.4 412 30.8
Manes.18G010907 Manihot esculenta HOM05D004095 ORTHO05D003197 3.5e-17 93.6 388 28.9
Gorai.009G193100 Gossypium raimondii HOM05D004095 ORTHO05D003197 4.6e-17 93.2 379 29.8
PSO675G0587 Papaver somniferum HOM05D004095 ORTHO05D003197 1.7e-16 91.3 383 38.1
Aqoxy5G01820 Aquilegia oxysepala HOM05D004095 ORTHO05D003197 2.3e-16 90.9 402 31.1
Duzib264G0091 Durio zibethinus HOM05D004095 ORTHO05D003197 2.3e-16 90.9 384 32.8
Gorai.003G007900 Gossypium raimondii HOM05D004095 ORTHO05D003197 2.3e-16 90.9 382 30.4
Lj5g0025072 Lotus japonicus HOM05D004095 ORTHO05D003197 3.9e-16 90.1 381 34.4
GSVIVG01018727001 Vitis vinifera HOM05D004095 ORTHO05D003197 3.9e-16 90.1 183 46.4
HanXRQChr12g0366821 Helianthus annuus HOM05D004095 ORTHO05D003197 6.6e-16 89.4 410 31.2
TWI36G1615 Tripterygium wilfordii HOM05D004095 ORTHO05D003197 1.1e-15 88.6 292 32.5
unitig_749.g13901 Utricularia gibba HOM05D004095 ORTHO05D003197 3.3e-15 87.0 383 31.1
COL.COLO4_22466 Corchorus olitorius HOM05D004095 ORTHO05D003197 4.3e-15 86.7 382 26.7
Gohir.D05G187800 Gossypium hirsutum HOM05D004095 ORTHO05D003197 4.3e-15 86.7 378 28.8
Thecc.08G047900 Theobroma cacao HOM05D004095 ORTHO05D003197 4.3e-15 86.7 378 31.2
Duzib147G0922 Durio zibethinus HOM05D004095 ORTHO05D003197 7.3e-15 85.9 381 32.5
Nitab4.5_0006505g0050 Nicotiana tabacum HOM05D004095 ORTHO05D003197 1.2e-14 85.1 422 31.0
PSO541G2818 Papaver somniferum HOM05D004095 ORTHO05D003197 1.6e-14 84.7 381 37.5
Potri.005G242400 Populus trichocarpa HOM05D004095 ORTHO05D003197 1.6e-14 84.7 378 29.4
Lsat_1_v5_gn_8_29800 Lactuca sativa HOM05D004095 ORTHO05D003197 2.8e-14 84.0 181 46.4
Sed0017695 Sechium edule HOM05D004095 ORTHO05D003197 2.8e-14 84.0 382 31.2
ECA233G2314 Erigeron canadensis HOM05D004095 ORTHO05D003197 4.7e-14 83.2 449 31.4
Gohir.A05G185000 Gossypium hirsutum HOM05D004095 ORTHO05D003197 4.7e-14 83.2 385 26.8
Gohir.A02G172400 Gossypium hirsutum HOM05D004095 ORTHO05D003197 8.1e-14 82.4 381 29.4
Sabra02G0015500 Salix brachista HOM05D004095 ORTHO05D003197 1.1e-13 82.0 286 29.0
Haze_03728 Corylus avellana HOM05D004095 ORTHO05D003197 1.4e-13 81.6 306 31.0
Dinv39538 Davidia involucrata HOM05D004095 ORTHO05D003197 1.4e-13 81.6 160 50.0
PGSC0003DMG400029333 Solanum tuberosum HOM05D004095 ORTHO05D003197 4.0e-13 80.1 381 29.7
SGA_v2.0_scaffold19G08554 Striga asiatica HOM05D004095 ORTHO05D003197 4.0e-13 80.1 395 32.7
Gohir.D03G007700 Gossypium hirsutum HOM05D004095 ORTHO05D003197 5.2e-13 79.7 380 29.2
MSTRG.22345 Avicennia marina HOM05D004095 ORTHO05D003197 1.2e-12 78.6 388 30.9
Peaxi162Scf00064g00737 Petunia axillaris HOM05D004095 ORTHO05D003197 1.5e-12 78.2 182 44.0
Lj4A799T84 Lonicera japonica HOM05D004095 ORTHO05D003197 2.0e-12 77.8 378 32.0
Haze_22667 Corylus avellana HOM05D004095 ORTHO05D003197 4.4e-12 76.6 388 32.2
FAN19G1292 Fragaria x ananassa HOM05D024588 ORTHO05D003197 4.4e-12 76.6 173 42.2
GSVIVG01009951001 Vitis vinifera HOM05D004095 ORTHO05D003197 4.4e-12 76.6 130 54.6
PSO700G0117 Papaver somniferum HOM05D004095 ORTHO05D003197 5.8e-12 76.3 403 29.5
CiPaw.07G146700 Carya illinoinensis HOM05D004095 ORTHO05D003197 7.6e-12 75.9 389 28.8
MBI05_g23379_MAGBIO Magnolia biondii HOM05D004095 ORTHO05D003197 1.7e-11 74.7 182 40.7
Lalb_Chr08g0246191 Lupinus albus HOM05D004095 ORTHO05D003197 2.2e-11 74.3 390 32.6
Atru.chr3.863_Atru.chr3.864 Acer truncatum HOM05D004095 ORTHO05D003197 3.8e-11 73.6 393 30.0
Actinidia03180 Actinidia chinensis HOM05D004095 ORTHO05D003197 4.9e-11 73.2 86 50.0
PSO170G2543 Papaver somniferum HOM05D004095 ORTHO05D003197 4.9e-11 73.2 395 27.3
QL02p012206 Quercus lobata HOM05D004095 ORTHO05D003197 4.9e-11 73.2 86 50.0
Sed0007913 Sechium edule HOM05D004095 ORTHO05D003197 8.4e-11 72.4 391 25.3
TAR628G1526 Trochodendron aralioides HOM05D004095 ORTHO05D003197 3.2e-10 70.5 321 26.8
CiPaw.08G067700 Carya illinoinensis HOM05D004095 ORTHO05D003197 9.3e-10 68.9 394 27.7
Ciclev10002009m.g Citrus clementina HOM05D004095 ORTHO05D003197 9.3e-10 68.9 391 28.4
Prupe.7G171900 Prunus persica HOM05D004095 ORTHO05D003197 1.2e-09 68.6 170 39.4
Medtr1g025620 Medicago truncatula HOM05D013708 ORTHO05D003197 2.1e-09 67.8 397 31.2
Sabra05G0187500 Salix brachista HOM05D004095 ORTHO05D003197 2.1e-09 67.8 380 26.3
Nn5g30782 Nelumbo nucifera HOM05D004095 ORTHO05D003197 2.7e-09 67.4 381 27.6
HanXRQChr13g0387151 Helianthus annuus HOM05D004095 ORTHO05D003197 4.6e-09 66.6 484 29.1
Gorai.008G131100 Gossypium raimondii HOM05D004095 ORTHO05D003197 1.0e-08 65.5 289 26.3
COL.COLO4_26117 Corchorus olitorius HOM05D004095 ORTHO05D003197 1.3e-08 65.1 284 26.4
Gohir.A01G110100 Gossypium hirsutum HOM05D004095 ORTHO05D003197 1.3e-08 65.1 385 24.4
PGR031G2559 Punica granatum HOM05D004095 ORTHO05D003197 1.7e-08 64.7 389 27.8
FvH4_1g11400 Fragaria vesca HOM05D024588 ORTHO05D003197 5.1e-08 63.2 171 42.7
Gohir.D01G096700 Gossypium hirsutum HOM05D004095 ORTHO05D003197 5.1e-08 63.2 379 26.4
Gorai.002G122400 Gossypium raimondii HOM05D004095 ORTHO05D003197 4.3e-07 60.1 281 26.3
Aa31LG7G4540 Aethionema arabicum HOM05D008819 ORTHO05D003197 5.6e-07 59.7 383 21.7
THA.LOC104804274 Tarenaya hassleriana HOM05D004095 ORTHO05D003197 5.6e-07 59.7 395 29.9
HPP92_007327 Vanilla planifolia HOM05D004095 ORTHO05D003197 5.6e-07 59.7 387 26.1
RcHm_v2.0_Chr2g0098961 Rosa chinensis HOM05D024588 ORTHO05D003197 7.3e-07 59.3 167 38.9
arahy.Tifrunner.gnm1.ann1.I59WU7 Arachis hypogaea HOM05D004095 ORTHO05D003197 1.6e-06 58.2 116 32.8
PGR119G1825 Punica granatum HOM05D004095 ORTHO05D003197 1.6e-06 58.2 181 38.1
unitig_0.g2088 Utricularia gibba HOM05D004095 ORTHO05D003197 2.1e-06 57.8 329 26.7
TPR.G26385 Trifolium pratense HOM05D013708 ORTHO05D003197 2.8e-06 57.4 197 38.1
arahy.Tifrunner.gnm1.ann1.VNIF6J Arachis hypogaea HOM05D004095 ORTHO05D003197 3.6e-06 57.0 132 32.6
THA.LOC104809551 Tarenaya hassleriana HOM05D008819 ORTHO05D003197 4.8e-06 56.6 300 26.7
Prupe.1G362800 Prunus persica HOM05D004095 ORTHO05D003197 8.1e-06 55.8 289 26.6


User provided reference genes

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