Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_009479 Daucus carota HOM05D003453 ORTHO05D004154 2.9e-141 505.8 364 100.0
DCAR_020142 Daucus carota HOM05D003453 ORTHO05D004154 1.6e-83 313.9 364 73.6
FAN22G1784 Fragaria x ananassa HOM05D003453 ORTHO05D004154 3.6e-75 286.2 362 64.9
FAN12G0296 Fragaria x ananassa HOM05D003453 ORTHO05D004154 3.0e-74 283.1 365 63.0
Haze_22047 Corylus avellana HOM05D003453 ORTHO05D004154 5.1e-74 282.3 371 59.0
FvH4_4g06910 Fragaria vesca HOM05D003453 ORTHO05D004154 8.8e-74 281.6 365 67.4
FAN07G0750 Fragaria x ananassa HOM05D003453 ORTHO05D004154 1.1e-73 281.2 362 67.7
RcHm_v2.0_Chr4g0398811 Rosa chinensis HOM05D003453 ORTHO05D004154 1.5e-73 280.8 365 66.8
FAN17G0675 Fragaria x ananassa HOM05D003453 ORTHO05D004154 2.5e-73 280.0 362 67.4
PGR044G1644 Punica granatum HOM05D003453 ORTHO05D004154 1.7e-72 277.3 367 67.0
Oeu035455.1 Olea europaea HOM05D003453 ORTHO05D004154 8.2e-72 275.0 333 69.4
Atru.chr7.914 Acer truncatum HOM05D003453 ORTHO05D004154 3.4e-70 269.6 373 64.3
Actinidia38507 Actinidia chinensis HOM05D003453 ORTHO05D004154 5.0e-69 265.8 358 69.3
Medtr4g127120 Medicago truncatula HOM05D003453 ORTHO05D004154 2.5e-68 263.5 366 65.8
Oeu044656.1 Olea europaea HOM05D003453 ORTHO05D004154 1.2e-67 261.2 342 67.8
Migut.J00777 Erythranthe guttata HOM05D003453 ORTHO05D004154 1.6e-67 260.8 378 65.3
Oeu043899.1 Olea europaea HOM05D003453 ORTHO05D004154 3.6e-67 259.6 362 63.5
CSS0013411 Camellia sinensis var. sinensis HOM05D003453 ORTHO05D004154 5.1e-66 255.8 335 67.2
CSS0032765 Camellia sinensis var. sinensis HOM05D003453 ORTHO05D004154 5.1e-66 255.8 335 67.2
Dinv25469 Davidia involucrata HOM05D003453 ORTHO05D004154 1.1e-65 254.6 362 68.2
Thecc.09G192200 Theobroma cacao HOM05D003453 ORTHO05D004154 1.7e-64 250.8 366 62.0
Ciclev10008785m.g Citrus clementina HOM05D003453 ORTHO05D004154 2.8e-64 250.0 365 63.0
Cc06_g17230 Coffea canephora HOM05D003453 ORTHO05D004154 2.8e-64 250.0 321 66.4
COL.COLO4_37566 Corchorus olitorius HOM05D003453 ORTHO05D004154 8.2e-64 248.4 377 60.7
Prupe.1G072100 Prunus persica HOM05D003453 ORTHO05D004154 2.4e-63 246.9 366 60.1
Psat4g014280 Pisum sativum HOM05D003453 ORTHO05D004154 7.0e-63 245.4 366 50.0
MD13G1241200 Malus domestica HOM05D003453 ORTHO05D004154 2.0e-62 243.8 362 61.0
MD16G1245200 Malus domestica HOM05D003453 ORTHO05D004154 2.0e-62 243.8 365 61.6
Gohir.A13G182300 Gossypium hirsutum HOM05D003453 ORTHO05D004154 5.9e-62 242.3 334 67.1
Gorai.013G211100 Gossypium raimondii HOM05D003453 ORTHO05D004154 1.0e-61 241.5 342 66.4
VMungo1215G2556 Vigna mungo HOM05D003453 ORTHO05D004154 2.5e-60 236.9 360 60.8
Duzib168G0040 Durio zibethinus HOM05D003453 ORTHO05D004154 4.7e-59 232.6 361 58.4
Lj4g0007200 Lotus japonicus HOM05D003453 ORTHO05D004154 1.8e-58 230.7 363 63.4
Duzib150G0655 Durio zibethinus HOM05D003453 ORTHO05D004154 1.1e-57 228.0 362 59.1
GSVIVG01029273001 Vitis vinifera HOM05D003453 ORTHO05D004154 1.5e-57 227.6 321 67.0
Aa31LG8G16370 Aethionema arabicum HOM05D003453 ORTHO05D004154 2.0e-57 227.3 342 62.3
Lalb_Chr13g0299841 Lupinus albus HOM05D003453 ORTHO05D004154 2.6e-57 226.9 364 59.9
SalBow3G1932 Salvia bowleyana HOM05D003453 ORTHO05D004154 5.7e-57 225.7 365 61.6
Hma1.2p1_0235F.1_g098820 Hydrangea macrophylla HOM05D003453 ORTHO05D004154 7.4e-57 225.3 302 69.2
Potri.006G072700 Populus trichocarpa HOM05D003453 ORTHO05D004154 7.4e-57 225.3 380 60.3
Aqoxy7G02898 Aquilegia oxysepala HOM05D003453 ORTHO05D004154 9.7e-57 224.9 371 53.1
C07p54660 Brassica napus HOM05D003453 ORTHO05D004154 1.3e-56 224.6 335 62.7
BolC7t45955H Brassica oleracea HOM05D003453 ORTHO05D004154 1.3e-56 224.6 335 62.7
Nn8g40645 Nelumbo nucifera HOM05D003453 ORTHO05D004154 1.3e-56 224.6 363 56.5
Phvul.003G139800 Phaseolus vulgaris HOM05D003453 ORTHO05D004154 2.2e-56 223.8 362 61.0
TPR.G5414 Trifolium pratense HOM05D003453 ORTHO05D004154 2.2e-56 223.8 363 55.6
Thhalv10022960m.g Eutrema salsugineum HOM05D003453 ORTHO05D004154 3.7e-56 223.0 340 63.2
Cpa.g.sc115.61 Carica papaya HOM05D003453 ORTHO05D004154 4.8e-56 222.6 361 59.6
arahy.Tifrunner.gnm1.ann1.JP7J3T Arachis hypogaea HOM05D003453 ORTHO05D004154 1.1e-55 221.5 366 52.7
Lalb_Chr07g0180741 Lupinus albus HOM05D003453 ORTHO05D004154 1.1e-55 221.5 365 58.9
SGA_v2.0_scaffold31G12781 Striga asiatica HOM05D003453 ORTHO05D004154 1.1e-55 221.5 376 63.3
Sp3g32700 Schrenkiella parvula HOM05D003453 ORTHO05D004154 1.4e-55 221.1 335 63.3
TWI34G1803 Tripterygium wilfordii HOM05D003453 ORTHO05D004154 1.4e-55 221.1 362 62.4
CsaV3_2G008970 Cucumis sativus L. HOM05D003453 ORTHO05D004154 1.8e-55 220.7 370 62.7
Gorai.012G008100 Gossypium raimondii HOM05D003453 ORTHO05D004154 1.8e-55 220.7 365 55.3
AT2G19330 Arabidopsis thaliana HOM05D003453 ORTHO05D004154 3.1e-55 219.9 340 62.4
CiPaw.08G031400 Carya illinoinensis HOM05D003453 ORTHO05D004154 4.1e-55 219.5 363 57.3
AL3G48980 Arabidopsis lyrata HOM05D003453 ORTHO05D004154 5.3e-55 219.2 340 62.1
Potri.018G139700 Populus trichocarpa HOM05D003453 ORTHO05D004154 7.0e-55 218.8 375 59.7
Sabra06G0054100 Salix brachista HOM05D003453 ORTHO05D004154 9.1e-55 218.4 380 59.7
Ca_21264_v3 Cicer arietinum L. HOM05D003453 ORTHO05D004154 2.0e-54 217.2 370 55.7
DCAR_018009 Daucus carota HOM05D003453 ORTHO05D004154 2.0e-54 217.2 375 59.5
Manes.14G161200 Manihot esculenta HOM05D003453 ORTHO05D004154 2.0e-54 217.2 366 60.7
Gohir.D04G006700 Gossypium hirsutum HOM05D003453 ORTHO05D004154 4.5e-54 216.1 365 58.4
Carub.0003s3355 Capsella rubella HOM05D003453 ORTHO05D004154 7.7e-54 215.3 336 62.5
Eucgr.C00085 Eucalyptus grandis HOM05D003453 ORTHO05D004154 1.3e-53 214.5 313 63.6
Glyma.17G057600 Glycine max HOM05D003453 ORTHO05D004154 5.0e-53 212.6 369 59.9
EL10Ac8g19292 Beta vulgaris HOM05D003453 ORTHO05D004154 6.5e-53 212.2 337 58.2
A07p01420 Brassica napus HOM05D003453 ORTHO05D004154 6.5e-53 212.2 335 62.1
C07p02870 Brassica napus HOM05D003453 ORTHO05D004154 6.5e-53 212.2 335 62.1
BolC7t40684H Brassica oleracea HOM05D003453 ORTHO05D004154 6.5e-53 212.2 335 62.1
BraA07t27936Z Brassica rapa HOM05D003453 ORTHO05D004154 6.5e-53 212.2 335 62.1
ClCG11G011550 Citrullus lanatus HOM05D003453 ORTHO05D004154 8.5e-53 211.8 333 64.6
BcaB03g16722 Brassica carinata HOM05D003453 ORTHO05D004154 1.1e-52 211.5 335 61.8
Sabra18G0114200 Salix brachista HOM05D003453 ORTHO05D004154 1.1e-52 211.5 330 62.4
Ah.09g228510 Amaranthus hybridus HOM05D003453 ORTHO05D004154 1.5e-52 211.1 322 64.9
Duzib170G0719 Durio zibethinus HOM05D003453 ORTHO05D004154 1.5e-52 211.1 362 61.6
SHI03070 Sapria himalayana HOM05D003453 ORTHO05D004154 1.9e-52 210.7 341 50.4
BraA03t14987Z Brassica rapa HOM05D003453 ORTHO05D004154 7.2e-52 208.8 343 64.1
TAR625G0633 Trochodendron aralioides HOM05D003453 ORTHO05D004154 7.2e-52 208.8 335 63.3
A03p59300 Brassica napus HOM05D003453 ORTHO05D004154 9.4e-52 208.4 343 64.1
Gohir.A05G408700 Gossypium hirsutum HOM05D003453 ORTHO05D004154 2.1e-51 207.2 357 58.0
BraA03t14715Z Brassica rapa HOM05D003453 ORTHO05D004154 1.0e-50 204.9 339 54.3
CARHR109780 Cardamine hirsuta HOM05D003453 ORTHO05D004154 1.0e-50 204.9 336 60.4
TWI32G0581 Tripterygium wilfordii HOM05D003453 ORTHO05D004154 1.4e-50 204.5 363 58.4
Sed0020380 Sechium edule HOM05D003453 ORTHO05D004154 4.0e-50 203.0 326 62.9
ClCG06G013840 Citrullus lanatus HOM05D003453 ORTHO05D004154 1.2e-49 201.4 298 66.8
CDE05G1169 Ceratophyllum demersum HOM05D003453 ORTHO05D004154 2.0e-49 200.7 342 50.6
Carub.0004s1475 Capsella rubella HOM05D003453 ORTHO05D004154 2.6e-49 200.3 364 58.8
Sc08g0004730 Simmondsia chinensis HOM05D003453 ORTHO05D004154 3.4e-49 199.9 371 45.8
Manes.06G017500 Manihot esculenta HOM05D003453 ORTHO05D004154 5.7e-49 199.1 363 59.2
Lalb_Chr23g0276711 Lupinus albus HOM05D003453 ORTHO05D004154 7.5e-49 198.7 338 57.1
Sed0024940 Sechium edule HOM05D003453 ORTHO05D004154 7.5e-49 198.7 323 66.6
THA.LOC104814639 Tarenaya hassleriana HOM05D003453 ORTHO05D004154 7.5e-49 198.7 342 62.6
CDE05G3189 Ceratophyllum demersum HOM05D003453 ORTHO05D004154 1.7e-48 197.6 353 56.1
CsaV3_1G032040 Cucumis sativus L. HOM05D003453 ORTHO05D004154 3.7e-48 196.4 337 60.2
Eucgr.C00084 Eucalyptus grandis HOM05D003453 ORTHO05D004154 6.3e-48 195.7 313 62.9
Glyma.09G061500 Glycine max HOM05D003453 ORTHO05D004154 1.8e-47 194.1 358 58.7
Eucgr.C02218 Eucalyptus grandis HOM05D003453 ORTHO05D004154 7.0e-47 192.2 363 57.6
Hund24523 Selenicereus undatus HOM05D003453 ORTHO05D004154 1.2e-46 191.4 323 61.3
MELO3C003949.2 Cucumis melo HOM05D003453 ORTHO05D004154 1.0e-45 188.3 333 63.4
Glyma.15G167800 Glycine max HOM05D003453 ORTHO05D004154 2.2e-45 187.2 335 60.0
THA.LOC104817769 Tarenaya hassleriana HOM05D003453 ORTHO05D004154 2.9e-45 186.8 368 54.1
Peaxi162Scf00006g02914 Petunia axillaris HOM05D003453 ORTHO05D004154 6.5e-45 185.7 350 58.3
Lj6g0025589 Lotus japonicus HOM05D003453 ORTHO05D004154 8.5e-45 185.3 326 59.5
A03p56450 Brassica napus HOM05D003453 ORTHO05D004154 1.1e-44 184.9 335 59.7
Thhalv10025419m.g Eutrema salsugineum HOM05D003453 ORTHO05D004154 9.4e-44 181.8 332 60.5
unitig_578.g15728 Utricularia gibba HOM05D003453 ORTHO05D004154 2.7e-43 180.3 365 48.5
Thhalv10027502m.g Eutrema salsugineum HOM05D003453 ORTHO05D004154 3.6e-43 179.9 338 57.7
CANSAT11G2669 Cannabis sativa HOM05D003453 ORTHO05D004154 4.7e-43 179.5 377 56.5
HanXRQChr05g0142141 Helianthus annuus HOM05D003453 ORTHO05D004154 4.7e-43 179.5 369 55.0
BcaNung00498 Brassica carinata HOM05D003453 ORTHO05D004154 1.8e-42 177.6 328 63.1
Carub.0007s1491 Capsella rubella HOM05D003453 ORTHO05D004154 5.2e-42 176.0 332 59.0
PSO063G7373 Papaver somniferum HOM05D003453 ORTHO05D004154 6.8e-42 175.6 341 58.4
arahy.Tifrunner.gnm1.ann1.SX1TLQ Arachis hypogaea HOM05D003453 ORTHO05D004154 1.2e-41 174.9 369 50.1
Phvul.009G234500 Phaseolus vulgaris HOM05D003453 ORTHO05D004154 1.2e-41 174.9 332 58.1
Lju50A41T23 Lonicera japonica HOM05D003453 ORTHO05D004154 3.4e-41 173.3 264 60.6
Lju50A42T20 Lonicera japonica HOM05D003453 ORTHO05D004154 3.4e-41 173.3 264 60.6
BcaC06g32772 Brassica carinata HOM05D003453 ORTHO05D004154 4.4e-41 172.9 341 58.7
AL7G22370 Arabidopsis lyrata HOM05D003453 ORTHO05D004154 5.7e-41 172.6 340 57.4
PSO170G1153 Papaver somniferum HOM05D003453 ORTHO05D004154 1.3e-40 171.4 368 55.2
CiPaw.07G199200 Carya illinoinensis HOM05D003453 ORTHO05D004154 1.7e-40 171.0 295 60.0
Nitab4.5_0001335g0020 Nicotiana tabacum HOM05D003453 ORTHO05D004154 1.7e-40 171.0 336 50.9
Lju432C7T0 Lonicera japonica HOM05D003453 ORTHO05D004154 3.7e-40 169.9 264 60.2
AT4G29880 Arabidopsis thaliana HOM05D003453 ORTHO05D004154 4.9e-40 169.5 346 55.5
CDE02G3632 Ceratophyllum demersum HOM05D003453 ORTHO05D004154 6.3e-40 169.1 336 51.8
A01p17310 Brassica napus HOM05D003453 ORTHO05D004154 1.6e-38 164.5 340 56.8
BraA01t01686Z Brassica rapa HOM05D003453 ORTHO05D004154 1.6e-38 164.5 340 56.8
MBI16_g09350_MAGBIO Magnolia biondii HOM05D003453 ORTHO05D004154 2.7e-38 163.7 346 51.2
PSO063G4618 Papaver somniferum HOM05D003453 ORTHO05D004154 2.7e-38 163.7 329 58.1
Aa31LG3G390 Aethionema arabicum HOM05D003453 ORTHO05D004154 2.3e-37 160.6 333 50.2
BcaC06g36564 Brassica carinata HOM05D003453 ORTHO05D004154 2.3e-37 160.6 251 67.7
Gohir.D13G185000 Gossypium hirsutum HOM05D003453 ORTHO05D004154 2.3e-37 160.6 268 68.7
CARHR233550 Cardamine hirsuta HOM05D003453 ORTHO05D004154 6.6e-37 159.1 330 58.2
AUR62027430 Chenopodium quinoa HOM05D003453 ORTHO05D004154 6.6e-37 159.1 332 44.3
TPR.G2523 Trifolium pratense HOM05D003453 ORTHO05D004154 6.6e-37 159.1 361 55.7
BolC1t02107H Brassica oleracea HOM05D003453 ORTHO05D004154 1.1e-36 158.3 340 56.2
HanXRQChr09g0245371 Helianthus annuus HOM05D003453 ORTHO05D004154 1.5e-36 157.9 334 56.0
QL02p064658 Quercus lobata HOM05D003453 ORTHO05D004154 2.5e-36 157.1 364 52.7
C01p21810 Brassica napus HOM05D003453 ORTHO05D004154 9.5e-36 155.2 340 55.3
Lsat_1_v5_gn_7_55120 Lactuca sativa HOM05D003453 ORTHO05D004154 1.2e-35 154.8 358 54.2
BolC7t46200H Brassica oleracea HOM05D003453 ORTHO05D004154 2.1e-35 154.1 343 59.5
VMungo1309G3166 Vigna mungo HOM05D003453 ORTHO05D004154 2.1e-35 154.1 325 58.2
AT4G26050 Arabidopsis thaliana HOM05D003453 ORTHO05D004154 2.8e-35 153.7 358 54.7
Solyc12g017480.3 Solanum lycopersicum HOM05D003453 ORTHO05D004154 3.6e-35 153.3 328 57.0
Sopen12g008270 Solanum pennellii HOM05D003453 ORTHO05D004154 3.6e-35 153.3 328 56.7
C07p57310 Brassica napus HOM05D003453 ORTHO05D004154 4.7e-35 152.9 343 59.2
arahy.Tifrunner.gnm1.ann1.3E2B2N Arachis hypogaea HOM05D003453 ORTHO05D004154 6.1e-35 152.5 304 57.9
CARHR237770 Cardamine hirsuta HOM05D003453 ORTHO05D004154 6.1e-35 152.5 372 51.3
Lsat_1_v5_gn_8_68380 Lactuca sativa HOM05D003453 ORTHO05D004154 6.1e-35 152.5 345 55.1
Sed0001635 Sechium edule HOM05D003453 ORTHO05D004154 6.1e-35 152.5 276 54.7
AL7G26940 Arabidopsis lyrata HOM05D003453 ORTHO05D004154 8.0e-35 152.1 335 57.3
ECA240G3569 Erigeron canadensis HOM05D003453 ORTHO05D004154 1.0e-34 151.8 334 56.9
arahy.Tifrunner.gnm1.ann1.N816GG Arachis hypogaea HOM05D003453 ORTHO05D004154 1.8e-34 151.0 304 57.6
Sp7g27690 Schrenkiella parvula HOM05D003453 ORTHO05D004154 2.3e-34 150.6 335 60.3
Medtr2g038380 Medicago truncatula HOM05D003453 ORTHO05D004154 3.0e-34 150.2 337 56.4
MSTRG.19360 Avicennia marina HOM05D003453 ORTHO05D004154 2.0e-33 147.5 221 64.7
Os04g0605300 Oryza sativa ssp. japonica HOM05D003453 ORTHO05D004154 1.7e-32 144.4 330 53.3
ATR0580G242 Amborella trichopoda HOM05D003453 ORTHO05D004154 8.3e-32 142.1 336 56.8
Oeu012385.1 Olea europaea HOM05D003453 ORTHO05D004154 1.4e-31 141.4 320 37.8
Psat1g142960 Pisum sativum HOM05D003453 ORTHO05D004154 1.4e-31 141.4 366 53.6
Actinidia29965 Actinidia chinensis HOM05D003453 ORTHO05D004154 9.2e-31 138.7 164 56.1
Psat1g142440 Pisum sativum HOM05D003453 ORTHO05D004154 9.2e-31 138.7 365 52.9
Zm00001eb071570 Zea mays HOM05D003453 ORTHO05D004154 1.3e-29 134.8 337 52.5
PGR018G0002 Punica granatum HOM05D003453 ORTHO05D004154 2.5e-28 130.6 361 51.0
PGR142G3132 Punica granatum HOM05D003453 ORTHO05D004154 2.5e-28 130.6 361 51.0
PGR142G4131 Punica granatum HOM05D003453 ORTHO05D004154 2.5e-28 130.6 361 51.0
HanXRQChr04g0103791 Helianthus annuus HOM05D003453 ORTHO05D004154 4.3e-28 129.8 354 50.6
PGSC0003DMG400006458 Solanum tuberosum HOM05D003453 ORTHO05D004154 7.3e-28 129.0 333 53.5
Rhsim03G0267900 Rhododendron simsii HOM05D003453 ORTHO05D004154 2.1e-27 127.5 313 55.6
Rhsim02G0202600 Rhododendron simsii HOM05D003453 ORTHO05D004154 2.8e-27 127.1 350 52.9
SHI33663 Sapria himalayana HOM05D003453 ORTHO05D004154 1.0e-26 125.2 219 51.1
MBI14_g10728_MAGBIO Magnolia biondii HOM05D003453 ORTHO05D004154 1.8e-26 124.4 224 50.0
vmacro22287 Vaccinium macrocarpon HOM05D003453 ORTHO05D004154 1.8e-26 124.4 211 55.9
ECA236G3452 Erigeron canadensis HOM05D003453 ORTHO05D004154 4.4e-25 119.8 338 48.2
Actinidia29966 Actinidia chinensis HOM05D003453 ORTHO05D004154 2.9e-24 117.1 91 68.1
Ca_02128_v3 Cicer arietinum L. HOM05D003453 ORTHO05D004154 1.4e-23 114.8 345 47.8
SpUn0235_0010 Schrenkiella parvula HOM05D003453 ORTHO05D004154 1.4e-23 114.8 238 66.4
CDE04G2437 Ceratophyllum demersum HOM05D002648 ORTHO05D002899 1.3e-21 108.2 243 57.6
AUR62031265 Chenopodium quinoa HOM05D003453 ORTHO05D004154 1.7e-21 107.8 228 45.2
Aa31LG2G20670 Aethionema arabicum HOM05D003453 ORTHO05D004154 3.6e-19 100.1 164 50.6
HPP92_010787 Vanilla planifolia HOM05D003453 ORTHO05D004154 2.3e-18 97.4 318 48.7
SEGI_15755 Sequoiadendron giganteum HOM05D003453 ORTHO05D004154 9.8e-17 92.0 321 53.0
MELO3C029529.2 Cucumis melo HOM05D003453 ORTHO05D004154 1.2e-11 75.1 92 45.7
SEGI_36064 Sequoiadendron giganteum HOM05D003453 ORTHO05D004154 2.8e-11 73.9 149 63.1
BcaB08g34854 Brassica carinata HOM05D003453 ORTHO05D004154 1.2e-06 58.5 106 53.8
Sc14g0003130 Simmondsia chinensis HOM05D003453 ORTHO05D004154 3.5e-06 57.0 338 45.6


User provided reference genes

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