Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_009449 Daucus carota HOM05D004498 ORTHO05D005300 3.1e-276 954.5 481 100.0
Hma1.2p1_0432F.1_g151900 Hydrangea macrophylla HOM05D004498 ORTHO05D005300 6.1e-192 674.5 534 64.0
Cc02_g04430 Coffea canephora HOM05D004498 ORTHO05D005300 1.2e-190 670.2 534 64.0
Dinv16848 Davidia involucrata HOM05D004498 ORTHO05D005300 7.0e-188 661.0 492 69.5
QL09p005249 Quercus lobata HOM05D004498 ORTHO05D005300 4.5e-187 658.3 518 64.1
Solyc05g051630.4 Solanum lycopersicum HOM05D004498 ORTHO05D005300 7.8e-187 657.5 519 65.1
Potri.001G126200 Populus trichocarpa HOM05D004498 ORTHO05D005300 2.3e-186 656.0 515 64.5
CAN.G937.4 Capsicum annuum HOM05D004498 ORTHO05D005300 5.0e-186 654.8 519 64.9
ECA233G4878 Erigeron canadensis HOM05D004498 ORTHO05D005300 3.3e-185 652.1 513 66.7
Ciclev10004737m.g Citrus clementina HOM05D004498 ORTHO05D005300 9.5e-185 650.6 516 64.0
Rhsim03G0165600 Rhododendron simsii HOM05D004498 ORTHO05D005300 8.0e-184 647.5 542 61.1
Manes.14G037200 Manihot esculenta HOM05D004498 ORTHO05D005300 1.0e-183 647.1 513 64.1
TAR375G0984 Trochodendron aralioides HOM05D004498 ORTHO05D005300 1.0e-183 647.1 529 63.3
Cfa008145 Carpinus fangiana HOM05D004498 ORTHO05D005300 1.4e-183 646.7 521 63.0
Migut.D02110 Erythranthe guttata HOM05D004498 ORTHO05D005300 1.8e-183 646.4 514 63.8
Actinidia24991 Actinidia chinensis HOM05D004498 ORTHO05D005300 1.2e-182 643.7 500 65.4
CiPaw.03G020300 Carya illinoinensis HOM05D004498 ORTHO05D005300 1.2e-182 643.7 531 62.1
COL.COLO4_14097 Corchorus olitorius HOM05D004498 ORTHO05D005300 1.5e-182 643.3 534 63.3
THA.LOC104819414 Tarenaya hassleriana HOM05D004498 ORTHO05D005300 5.8e-182 641.3 511 64.4
Gorai.008G215300 Gossypium raimondii HOM05D004498 ORTHO05D005300 2.4e-180 636.0 532 63.0
Migut.G01103 Erythranthe guttata HOM05D004498 ORTHO05D005300 7.0e-180 634.4 516 62.4
Gohir.D12G200100 Gossypium hirsutum HOM05D004498 ORTHO05D005300 1.6e-179 633.3 534 62.9
Sabra01G0097300 Salix brachista HOM05D004498 ORTHO05D005300 1.6e-179 633.3 589 56.9
Lj3g0015680 Lotus japonicus HOM05D004498 ORTHO05D005300 3.5e-179 632.1 513 62.0
Eucgr.G03077 Eucalyptus grandis HOM05D004498 ORTHO05D005300 6.0e-179 631.3 517 62.5
Ca_02786_v3 Cicer arietinum L. HOM05D004498 ORTHO05D005300 7.8e-179 630.9 519 61.1
Aqoxy3G03912 Aquilegia oxysepala HOM05D004498 ORTHO05D005300 1.7e-178 629.8 527 60.9
Thecc.03G153100 Theobroma cacao HOM05D004498 ORTHO05D005300 3.0e-178 629.0 519 64.0
Medtr4g036550 Medicago truncatula HOM05D004498 ORTHO05D005300 3.9e-178 628.6 512 61.1
TPR.G3665 Trifolium pratense HOM05D004498 ORTHO05D005300 3.9e-178 628.6 519 60.5
Atru.chr1.817 Acer truncatum HOM05D004498 ORTHO05D005300 1.9e-177 626.3 530 61.3
Psat6g116600 Pisum sativum HOM05D004498 ORTHO05D005300 2.5e-177 625.9 519 60.3
Sp6g35240 Schrenkiella parvula HOM05D004498 ORTHO05D005300 4.3e-177 625.2 509 62.1
Nitab4.5_0001187g0110 Nicotiana tabacum HOM05D004498 ORTHO05D005300 5.6e-177 624.8 485 67.4
CsaV3_4G004040 Cucumis sativus L. HOM05D004498 ORTHO05D005300 1.1e-175 620.5 527 61.1
Sc15g0000230 Simmondsia chinensis HOM05D004498 ORTHO05D005300 2.3e-175 619.4 525 60.8
Phvul.011G007100 Phaseolus vulgaris HOM05D004498 ORTHO05D005300 5.2e-175 618.2 519 59.9
PSO210G0611 Papaver somniferum HOM05D004498 ORTHO05D005300 1.5e-174 616.7 520 61.3
Psat6g142360 Pisum sativum HOM05D004498 ORTHO05D005300 1.5e-174 616.7 518 60.0
Hund20838 Selenicereus undatus HOM05D004498 ORTHO05D005300 3.4e-174 615.5 492 63.8
PSO210G1345 Papaver somniferum HOM05D004498 ORTHO05D005300 4.4e-174 615.1 520 61.3
Thhalv10013248m.g Eutrema salsugineum HOM05D004498 ORTHO05D005300 1.3e-173 613.6 514 62.3
Sed0003630 Sechium edule HOM05D004498 ORTHO05D005300 2.2e-173 612.8 534 60.3
Carub.0006s0661 Capsella rubella HOM05D004498 ORTHO05D005300 2.9e-173 612.5 509 61.5
BcaC03g13193 Brassica carinata HOM05D004498 ORTHO05D005300 3.2e-172 609.0 514 61.7
BcaC06g32495 Brassica carinata HOM05D004498 ORTHO05D005300 4.1e-172 608.6 517 60.9
Lalb_Chr04g0258171 Lupinus albus HOM05D004498 ORTHO05D005300 4.1e-172 608.6 515 60.2
Glyma.09G230400 Glycine max HOM05D004498 ORTHO05D005300 5.4e-172 608.2 519 59.7
A10p29360 Brassica napus HOM05D004498 ORTHO05D005300 1.6e-171 606.7 532 60.0
BcaB05g21603 Brassica carinata HOM05D004498 ORTHO05D005300 2.1e-171 606.3 514 61.5
BraA10t44979Z Brassica rapa HOM05D004498 ORTHO05D005300 1.0e-170 604.0 532 59.8
AL6G17950 Arabidopsis lyrata HOM05D004498 ORTHO05D005300 1.3e-170 603.6 513 60.2
AT5G07630 Arabidopsis thaliana HOM05D004498 ORTHO05D005300 3.3e-169 599.0 525 58.7
C02p03220 Brassica napus HOM05D004498 ORTHO05D005300 1.2e-168 597.0 524 60.1
HanXRQChr05g0142551 Helianthus annuus HOM05D004498 ORTHO05D005300 5.2e-167 591.7 512 62.5
Gohir.A12G197600 Gossypium hirsutum HOM05D004498 ORTHO05D005300 1.5e-166 590.1 500 63.8
ClCG07G016840 Citrullus lanatus HOM05D004498 ORTHO05D005300 9.9e-166 587.4 528 58.9
Prupe.6G033300 Prunus persica HOM05D004498 ORTHO05D005300 4.9e-165 585.1 509 59.5
Duzib084G1021 Durio zibethinus HOM05D004498 ORTHO05D005300 1.2e-163 580.5 486 63.2
MD11G1042200 Malus domestica HOM05D004498 ORTHO05D005300 3.0e-162 575.9 509 58.3
Lj8A44G33 Lonicera japonica HOM05D004498 ORTHO05D005300 6.2e-160 568.2 368 78.0
Ah.15g094140 Amaranthus hybridus HOM05D004498 ORTHO05D005300 1.8e-159 566.6 543 55.4
Aa31LG3G18790 Aethionema arabicum HOM05D004498 ORTHO05D005300 3.1e-159 565.8 511 57.3
BraA02t04927Z Brassica rapa HOM05D004498 ORTHO05D005300 5.2e-159 565.1 618 51.1
Glyma.12G006200 Glycine max HOM05D004498 ORTHO05D005300 2.0e-158 563.1 477 60.6
SGA_v2.0_scaffold115G32141 Striga asiatica HOM05D004498 ORTHO05D005300 2.0e-158 563.1 527 57.5
TWI23G0902 Tripterygium wilfordii HOM05D004498 ORTHO05D005300 2.0e-158 563.1 472 60.0
BolC2t06286H Brassica oleracea HOM05D004498 ORTHO05D005300 1.7e-157 560.1 629 50.2
GSVIVG01014038001 Vitis vinifera HOM05D004498 ORTHO05D005300 8.4e-157 557.8 521 56.0
Carub.0003s0947 Capsella rubella HOM05D004498 ORTHO05D005300 9.2e-156 554.3 507 58.0
CSS0042388 Camellia sinensis var. sinensis HOM05D004498 ORTHO05D005300 3.9e-154 548.9 451 62.3
Manes.06G133200 Manihot esculenta HOM05D004498 ORTHO05D005300 1.2e-150 537.3 524 55.9
SalBow7G0508 Salvia bowleyana HOM05D004498 ORTHO05D005300 7.1e-148 528.1 369 69.9
FvH4_3g41750 Fragaria vesca HOM05D004498 ORTHO05D005300 1.5e-145 520.4 543 52.9
AL3G21620 Arabidopsis lyrata HOM05D004498 ORTHO05D005300 3.3e-145 519.2 480 57.7
RcHm_v2.0_Chr5g0074831 Rosa chinensis HOM05D004498 ORTHO05D005300 4.3e-145 518.8 548 53.1
MELO3C017661.2 Cucumis melo HOM05D004498 ORTHO05D005300 1.6e-144 516.9 377 69.8
Nn1g09651 Nelumbo nucifera HOM05D004498 ORTHO05D005300 1.6e-144 516.9 362 71.5
vmacro22807 Vaccinium macrocarpon HOM05D004498 ORTHO05D005300 8.1e-144 514.6 434 61.8
PGR119G0143 Punica granatum HOM05D004498 ORTHO05D005300 9.0e-143 511.1 463 60.0
Sopen05g030080 Solanum pennellii HOM05D004498 ORTHO05D005300 5.8e-142 508.4 426 62.2
FAN11G1420 Fragaria x ananassa HOM05D004498 ORTHO05D005300 7.6e-142 508.1 558 51.3
Lsat_1_v5_gn_8_10281 Lactuca sativa HOM05D004498 ORTHO05D005300 7.1e-140 501.5 443 59.6
FAN16G2392 Fragaria x ananassa HOM05D004498 ORTHO05D005300 8.1e-136 488.0 530 52.5
C09p69720 Brassica napus HOM05D004498 ORTHO05D005300 1.8e-135 486.9 447 58.2
BolC9t59715H Brassica oleracea HOM05D004498 ORTHO05D005300 9.0e-135 484.6 455 57.1
AUR62009833 Chenopodium quinoa HOM05D004498 ORTHO05D005300 2.1e-131 473.4 426 58.2
FAN25G1514 Fragaria x ananassa HOM05D004498 ORTHO05D005300 2.3e-130 469.9 568 48.4
Peaxi162Scf00167g00733 Petunia axillaris HOM05D004498 ORTHO05D005300 5.1e-130 468.8 412 60.0
ATR0745G086 Amborella trichopoda HOM05D004498 ORTHO05D005300 1.5e-129 467.2 515 49.3
SGA_v2.0_scaffold92G28289 Striga asiatica HOM05D004498 ORTHO05D005300 9.6e-129 464.5 383 62.9
Nitab4.5_0002764g0030 Nicotiana tabacum HOM05D004498 ORTHO05D005300 6.9e-127 458.4 404 60.6
arahy.Tifrunner.gnm1.ann1.LBI7WJ Arachis hypogaea HOM05D004498 ORTHO05D005300 1.5e-126 457.2 415 57.1
EL10Ac7g16351 Beta vulgaris HOM05D004498 ORTHO05D005300 2.0e-126 456.8 578 47.8
arahy.Tifrunner.gnm1.ann1.V9VPQR Arachis hypogaea HOM05D004498 ORTHO05D005300 1.0e-125 454.5 444 53.4
SHI13988 Sapria himalayana HOM05D004498 ORTHO05D005300 1.0e-125 454.5 463 52.3
HPP92_003455 Vanilla planifolia HOM05D004498 ORTHO05D005300 3.8e-125 452.6 510 48.6
Migut.G01144 Erythranthe guttata HOM05D004498 ORTHO05D005300 5.5e-124 448.7 320 70.6
Oeu022469.1 Olea europaea HOM05D004498 ORTHO05D005300 1.1e-111 407.9 308 67.2
Rhsim07G0010200 Rhododendron simsii HOM05D004498 ORTHO05D005300 2.4e-111 406.8 337 62.9
FAN21G3639 Fragaria x ananassa HOM05D004498 ORTHO05D005300 1.7e-109 400.6 445 50.6
Dinv06575 Davidia involucrata HOM05D004498 ORTHO05D005300 6.5e-109 398.7 324 65.7
unitig_578.g16611 Utricularia gibba HOM05D004498 ORTHO05D005300 1.1e-108 397.9 448 48.9
Zm00001eb105090 Zea mays HOM05D004498 ORTHO05D005300 5.5e-108 395.6 465 47.1
Mapoly0124s0016 Marchantia polymorpha HOM05D004498 ORTHO05D005300 4.4e-97 359.4 510 40.8
CARHR205520 Cardamine hirsuta HOM05D004498 ORTHO05D005300 1.1e-95 354.8 252 70.6
Pp3c18_8280 Physcomitrium patens HOM05D004498 ORTHO05D005300 2.2e-93 347.1 477 41.5
GSVIVG01037114001 Vitis vinifera HOM05D004498 ORTHO05D005300 1.0e-90 338.2 383 50.7
Migut.A00970 Erythranthe guttata HOM05D004498 ORTHO05D005300 1.5e-89 334.3 300 57.3
SMO200G0031 Selaginella moellendorffii HOM05D004498 ORTHO05D005300 6.3e-88 328.9 509 37.5
Nitab4.5_0000818g0240 Nicotiana tabacum HOM05D004498 ORTHO05D005300 4.1e-87 326.2 285 61.4
arahy.Tifrunner.gnm1.ann1.XAT8RN Arachis hypogaea HOM05D004498 ORTHO05D005300 1.4e-74 284.6 232 61.6
AagrBONN_evm.TU.Sc2ySwM_362.1167 Anthoceros agrestis HOM05D004498 ORTHO05D005300 2.0e-73 280.8 446 37.9
Nitab4.5_0003647g0080 Nicotiana tabacum HOM05D004498 ORTHO05D005300 2.1e-67 260.8 449 38.8
SEGI_20056 Sequoiadendron giganteum HOM05D004498 ORTHO05D005300 9.5e-52 208.8 197 55.3
AagrBONN_evm.TU.Sc2ySwM_362.1160 Anthoceros agrestis HOM05D004498 ORTHO05D005300 1.2e-51 208.4 427 33.5
Actinidia13585 Actinidia chinensis HOM05D004498 ORTHO05D005300 1.8e-50 204.5 212 51.9
AUR62038145 Chenopodium quinoa HOM05D004498 ORTHO05D005300 9.9e-49 198.7 375 38.1
Oeu042546.1 Olea europaea HOM05D004498 ORTHO05D005300 3.6e-43 180.3 191 51.8
Migut.G01109 Erythranthe guttata HOM05D004498 ORTHO05D005300 1.1e-42 178.7 191 47.6
Cre11.g467726 Chlamydomonas reinhardtii HOM05D004498 ORTHO05D005300 1.8e-42 177.9 664 26.4
BcaC06g32419 Brassica carinata HOM05D004498 ORTHO05D005300 4.9e-40 169.9 439 29.8
Sabra03G0074300 Salix brachista HOM05D004498 ORTHO05D005300 1.9e-39 167.9 161 56.5
arahy.Tifrunner.gnm1.ann1.BI5KXL Arachis hypogaea HOM05D004498 ORTHO05D005300 7.1e-39 166.0 183 50.8
CDE02G4122 Ceratophyllum demersum HOM05D004498 ORTHO05D005300 1.2e-38 165.2 194 47.9
MCO14G174 Micromonas commoda HOM05D004498 ORTHO05D005300 6.9e-34 149.4 356 33.4
SEGI_28281 Sequoiadendron giganteum HOM05D004498 ORTHO05D005300 8.4e-32 142.5 124 54.0
Os07g0486100 Oryza sativa ssp. japonica HOM05D004498 ORTHO05D005300 4.2e-31 140.2 177 45.2
PGSC0003DMG402007235 Solanum tuberosum HOM05D004498 ORTHO05D005300 4.2e-31 140.2 97 69.1
CSS0024530 Camellia sinensis var. sinensis HOM05D004498 ORTHO05D005300 2.7e-30 137.5 94 70.2
Nitab4.5_0002764g0040 Nicotiana tabacum HOM05D004498 ORTHO05D005300 7.9e-30 136.0 111 66.7
Nn1g09635 Nelumbo nucifera HOM05D004498 ORTHO05D005300 1.6e-27 128.3 97 58.8
SGA_v2.0_scaffold4035G54420 Striga asiatica HOM05D004498 ORTHO05D005300 3.6e-27 127.1 127 47.2
BcaNung06188 Brassica carinata HOM05D004498 ORTHO05D005300 2.6e-25 120.9 162 42.0
SalBow7G0435 Salvia bowleyana HOM05D004498 ORTHO05D005300 1.5e-20 105.1 92 51.1
vmacro22806 Vaccinium macrocarpon HOM05D004498 ORTHO05D005300 1.9e-20 104.8 78 57.7
CARHR084780 Cardamine hirsuta HOM05D004498 ORTHO05D005300 5.6e-20 103.2 66 75.8
FvH4_1g27600 Fragaria vesca HOM05D004498 ORTHO05D005300 4.8e-19 100.1 84 64.3
Potri.003G107501 Populus trichocarpa HOM05D004498 ORTHO05D005300 1.1e-18 99.0 67 74.6
Prupe.6G034800 Prunus persica HOM05D004498 ORTHO05D005300 2.6e-17 94.4 56 82.1
SEGI_08016 Sequoiadendron giganteum HOM05D004498 ORTHO05D005300 4.9e-16 90.1 100 49.0
SEGI_20600 Sequoiadendron giganteum HOM05D004498 ORTHO05D005300 4.9e-16 90.1 100 49.0
PRCOL_00001376 Prasinoderma coloniale HOM05D004498 ORTHO05D005300 8.4e-16 89.4 480 25.4
CSS0021614 Camellia sinensis var. sinensis HOM05D004498 ORTHO05D005300 5.5e-15 86.7 62 62.9
PGSC0003DMG401007235 Solanum tuberosum HOM05D004498 ORTHO05D005300 4.3e-12 77.0 42 81.0
Nitab4.5_0003647g0090 Nicotiana tabacum HOM05D004498 ORTHO05D005300 2.8e-11 74.3 44 75.0
Lj3g0020155 Lotus japonicus HOM05D004498 ORTHO05D005300 3.2e-07 60.8 52 55.8
GSVIVG01037115001 Vitis vinifera HOM05D004498 ORTHO05D005300 7.2e-07 59.7 51 56.9
AagrBONN_evm.TU.Sc2ySwM_117.318 Anthoceros agrestis HOM05D004498 ORTHO05D005300 2.7e-06 57.8 112 35.7


User provided reference genes

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