Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_009355 Daucus carota HOM05D006594 ORTHO05D008383 2.3e-249 865.1 452 100.0
CSS0002088 Camellia sinensis var. sinensis HOM05D006594 ORTHO05D008383 8.2e-146 521.2 449 61.7
Hma1.2p1_1323F.1_g275590 Hydrangea macrophylla HOM05D006594 ORTHO05D008383 8.2e-146 521.2 450 61.3
CSS0024482 Camellia sinensis var. sinensis HOM05D006594 ORTHO05D008383 4.0e-145 518.8 449 61.5
Oeu022583.1 Olea europaea HOM05D006594 ORTHO05D008383 9.0e-145 517.7 457 58.9
HanXRQChr09g0253731 Helianthus annuus HOM05D006594 ORTHO05D008383 5.5e-142 508.4 449 60.1
Lsat_1_v5_gn_0_29900 Lactuca sativa HOM05D006594 ORTHO05D008383 4.6e-141 505.4 462 58.9
Cc02_g03190 Coffea canephora HOM05D006594 ORTHO05D008383 3.0e-140 502.7 460 56.7
Migut.F01134 Erythranthe guttata HOM05D006594 ORTHO05D008383 7.4e-139 498.0 452 57.3
Peaxi162Scf00915g00007 Petunia axillaris HOM05D006594 ORTHO05D008383 1.5e-136 490.3 454 57.5
PGSC0003DMG400014324 Solanum tuberosum HOM05D006594 ORTHO05D008383 2.6e-136 489.6 453 56.3
Sopen03g004840 Solanum pennellii HOM05D006594 ORTHO05D008383 5.5e-134 481.9 456 54.6
CAN.G856.1 Capsicum annuum HOM05D006594 ORTHO05D008383 3.6e-133 479.2 454 56.4
Solyc03g026010.3 Solanum lycopersicum HOM05D006594 ORTHO05D008383 3.6e-133 479.2 456 54.2
Cfa008301 Carpinus fangiana HOM05D006594 ORTHO05D008383 7.4e-131 471.5 467 54.2
QL09p014600 Quercus lobata HOM05D006594 ORTHO05D008383 1.7e-127 460.3 465 53.5
SGA_v2.0_scaffold113G31757 Striga asiatica HOM05D006594 ORTHO05D008383 5.0e-127 458.8 453 53.0
Duzib205G1849 Durio zibethinus HOM05D006594 ORTHO05D008383 8.5e-127 458.0 463 53.1
SalBow2G3298 Salvia bowleyana HOM05D006594 ORTHO05D008383 1.4e-126 457.2 444 54.3
MSTRG.8446 Avicennia marina HOM05D006594 ORTHO05D008383 2.5e-126 456.4 457 53.0
Ciclev10004900m.g Citrus clementina HOM05D006594 ORTHO05D008383 5.5e-126 455.3 469 53.3
CiPaw.03G104400 Carya illinoinensis HOM05D006594 ORTHO05D008383 7.2e-126 454.9 467 52.2
Sp6g14430 Schrenkiella parvula HOM05D006594 ORTHO05D008383 6.1e-125 451.8 453 53.2
COL.COLO4_14285 Corchorus olitorius HOM05D006594 ORTHO05D008383 1.4e-124 450.7 458 50.9
Manes.14G027600 Manihot esculenta HOM05D006594 ORTHO05D008383 1.8e-124 450.3 469 52.5
vmacro06700 Vaccinium macrocarpon HOM05D006594 ORTHO05D008383 2.6e-123 446.4 401 60.6
Thhalv10013484m.g Eutrema salsugineum HOM05D006594 ORTHO05D008383 4.4e-123 445.7 458 53.3
Rhsim03G0179000 Rhododendron simsii HOM05D006594 ORTHO05D008383 1.3e-122 444.1 391 62.1
Eucgr.K00239 Eucalyptus grandis HOM05D006594 ORTHO05D008383 2.4e-121 439.9 479 51.6
MD07G1266600 Malus domestica HOM05D006594 ORTHO05D008383 2.4e-121 439.9 459 51.9
TWI23G0502 Tripterygium wilfordii HOM05D006594 ORTHO05D008383 2.4e-121 439.9 468 52.4
Sc19g0001600 Simmondsia chinensis HOM05D006594 ORTHO05D008383 3.1e-121 439.5 464 51.1
Aa31LG3G8560 Aethionema arabicum HOM05D006594 ORTHO05D008383 7.0e-121 438.3 453 52.3
RcHm_v2.0_Chr1g0376971 Rosa chinensis HOM05D006594 ORTHO05D008383 1.0e-119 434.5 454 51.8
AT5G52180 Arabidopsis thaliana HOM05D006594 ORTHO05D008383 2.2e-119 433.3 457 51.4
Phvul.007G067900 Phaseolus vulgaris HOM05D006594 ORTHO05D008383 2.2e-119 433.3 458 52.4
Carub.0008s1227 Capsella rubella HOM05D006594 ORTHO05D008383 8.5e-119 431.4 454 51.1
CARHR265100 Cardamine hirsuta HOM05D006594 ORTHO05D008383 1.4e-118 430.6 453 50.6
PGR142G0281 Punica granatum HOM05D006594 ORTHO05D008383 5.5e-118 428.7 453 52.1
Prupe.2G292200 Prunus persica HOM05D006594 ORTHO05D008383 7.2e-118 428.3 455 52.1
BraA10t43068Z Brassica rapa HOM05D006594 ORTHO05D008383 1.6e-117 427.2 447 52.1
BcaC04g20605 Brassica carinata HOM05D006594 ORTHO05D008383 2.1e-117 426.8 453 52.5
C09p41600 Brassica napus HOM05D006594 ORTHO05D008383 2.1e-117 426.8 453 52.5
BolC9t57044H Brassica oleracea HOM05D006594 ORTHO05D008383 2.1e-117 426.8 453 52.5
Actinidia32874 Actinidia chinensis HOM05D006594 ORTHO05D008383 2.7e-117 426.4 396 58.1
Potri.015G140900 Populus trichocarpa HOM05D006594 ORTHO05D008383 3.6e-117 426.0 474 50.6
Medtr1g100767 Medicago truncatula HOM05D006594 ORTHO05D008383 6.1e-117 425.2 452 52.2
A10p09870 Brassica napus HOM05D006594 ORTHO05D008383 1.4e-116 424.1 447 51.7
Ca_10784_v3 Cicer arietinum L. HOM05D006594 ORTHO05D008383 2.3e-116 423.3 463 50.8
BcaB08g35566 Brassica carinata HOM05D006594 ORTHO05D008383 3.9e-116 422.5 455 51.4
Dinv28461 Davidia involucrata HOM05D006594 ORTHO05D008383 5.2e-116 422.2 413 56.4
PSO782G0556 Papaver somniferum HOM05D006594 ORTHO05D008383 5.2e-116 422.2 477 50.7
Sabra15G0151500 Salix brachista HOM05D006594 ORTHO05D008383 1.5e-115 420.6 470 50.0
AL8G26560 Arabidopsis lyrata HOM05D006594 ORTHO05D008383 4.4e-115 419.1 453 50.3
FAN10G1161 Fragaria x ananassa HOM05D006594 ORTHO05D008383 4.4e-115 419.1 456 50.9
Lalb_Chr06g0161051 Lupinus albus HOM05D006594 ORTHO05D008383 7.4e-115 418.3 461 50.5
THA.LOC104825095 Tarenaya hassleriana HOM05D006594 ORTHO05D008383 2.8e-114 416.4 451 49.4
CsaV3_3G016960 Cucumis sativus L. HOM05D006594 ORTHO05D008383 7.0e-113 411.8 468 47.9
LjContig00238g0014067 Lotus japonicus HOM05D006594 ORTHO05D008383 7.0e-113 411.8 458 50.4
Psat6g200680 Pisum sativum HOM05D006594 ORTHO05D008383 1.2e-112 411.0 453 51.0
MELO3C006892.2 Cucumis melo HOM05D006594 ORTHO05D008383 3.5e-112 409.5 467 48.2
FAN06G0009 Fragaria x ananassa HOM05D006594 ORTHO05D008383 3.5e-112 409.5 458 50.0
Glyma.10G237700 Glycine max HOM05D006594 ORTHO05D008383 4.5e-112 409.1 462 49.8
Aqoxy7G00398 Aquilegia oxysepala HOM05D006594 ORTHO05D008383 5.9e-112 408.7 452 50.7
Gohir.D12G260500 Gossypium hirsutum HOM05D006594 ORTHO05D008383 5.9e-112 408.7 461 48.8
FAN06G4553 Fragaria x ananassa HOM05D006594 ORTHO05D008383 7.7e-112 408.3 458 50.0
Glyma.20G156900 Glycine max HOM05D006594 ORTHO05D008383 1.0e-111 407.9 459 50.3
FAN01G0792 Fragaria x ananassa HOM05D006594 ORTHO05D008383 2.2e-111 406.8 449 50.6
Gorai.008G279100 Gossypium raimondii HOM05D006594 ORTHO05D008383 2.9e-111 406.4 459 48.6
ClCG05G007930 Citrullus lanatus HOM05D006594 ORTHO05D008383 8.5e-111 404.8 464 47.4
Haze_13736 Corylus avellana HOM05D006594 ORTHO05D008383 9.4e-110 401.4 465 48.6
TAR374G1009 Trochodendron aralioides HOM05D006594 ORTHO05D008383 1.2e-107 394.4 363 58.4
AUR62021215 Chenopodium quinoa HOM05D006594 ORTHO05D008383 4.4e-107 392.5 408 51.7
GSVIVG01010594001 Vitis vinifera HOM05D006594 ORTHO05D008383 4.4e-107 392.5 444 50.2
PSO478G3258 Papaver somniferum HOM05D006594 ORTHO05D008383 4.8e-106 389.0 449 50.1
Manes.06G145800 Manihot esculenta HOM05D006594 ORTHO05D008383 1.8e-105 387.1 467 47.1
FAN03G3172 Fragaria x ananassa HOM05D006594 ORTHO05D008383 5.0e-103 379.0 422 50.7
TPR.G14337 Trifolium pratense HOM05D006594 ORTHO05D008383 3.2e-102 376.3 440 49.3
Ah.13g068460 Amaranthus hybridus HOM05D006594 ORTHO05D008383 2.1e-101 373.6 469 45.6
Sed0005391 Sechium edule HOM05D006594 ORTHO05D008383 6.3e-98 362.1 410 48.0
CDE11G0822 Ceratophyllum demersum HOM05D006594 ORTHO05D008383 1.4e-97 360.9 452 43.8
arahy.Tifrunner.gnm1.ann1.GIF0V2 Arachis hypogaea HOM05D006594 ORTHO05D008383 2.3e-95 353.6 392 49.5
arahy.Tifrunner.gnm1.ann1.MGJ2V1 Arachis hypogaea HOM05D006594 ORTHO05D008383 1.1e-94 351.3 391 49.1
MBI12_g14429_MAGBIO Magnolia biondii HOM05D006594 ORTHO05D008383 3.1e-89 333.2 391 48.8
AUR62016008 Chenopodium quinoa HOM05D006594 ORTHO05D008383 3.9e-79 299.7 435 42.5
Gohir.A12G259700 Gossypium hirsutum HOM05D006594 ORTHO05D008383 1.2e-77 294.7 364 45.6
Nitab4.5_0001508g0080 Nicotiana tabacum HOM05D006594 ORTHO05D008383 1.6e-77 294.3 232 63.4
ATR0757G038 Amborella trichopoda HOM05D006594 ORTHO05D008383 1.8e-76 290.8 594 34.2
A06p20700 Brassica napus HOM05D006594 ORTHO05D008383 4.0e-76 289.7 232 61.6
Gohir.A08G100500 Gossypium hirsutum HOM05D006594 ORTHO05D008383 1.1e-73 281.6 331 48.0
Gorai.004G119800 Gossypium raimondii HOM05D006594 ORTHO05D008383 1.6e-69 267.7 459 38.1
unitig_0.g463 Utricularia gibba HOM05D006594 ORTHO05D008383 2.6e-67 260.4 256 53.5
FvH4_7g29210 Fragaria vesca HOM05D006594 ORTHO05D008383 3.1e-60 236.9 320 44.7
Lj1P995T25 Lonicera japonica HOM05D006594 ORTHO05D008383 2.1e-56 224.2 145 76.6
SEGI_30493 Sequoiadendron giganteum HOM05D006594 ORTHO05D008383 9.9e-51 205.3 529 30.1
Gohir.D08G112040 Gossypium hirsutum HOM05D006594 ORTHO05D008383 8.4e-50 202.2 452 33.8
Thecc.03G173100 Theobroma cacao HOM05D006594 ORTHO05D008383 3.9e-47 193.4 256 43.8
Zm00001eb378500 Zea mays HOM05D006594 ORTHO05D008383 5.1e-47 193.0 441 35.4
Nitab4.5_0000716g0260 Nicotiana tabacum HOM05D006594 ORTHO05D008383 6.2e-45 186.0 314 40.1
Os06g0129000 Oryza sativa ssp. japonica HOM05D006594 ORTHO05D008383 3.4e-43 180.3 446 34.1
SMO116G0206 Selaginella moellendorffii HOM05D006594 ORTHO05D008383 4.3e-38 163.3 469 27.5
AL1G10170 Arabidopsis lyrata HOM05D006594 ORTHO05D008383 2.5e-33 147.5 116 63.8
arahy.Tifrunner.gnm1.ann1.J8117K Arachis hypogaea HOM05D006594 ORTHO05D008383 1.0e-31 142.1 241 39.0
MD01G1198800 Malus domestica HOM05D006594 ORTHO05D008383 7.6e-27 125.9 445 27.4
Mapoly0061s0021 Marchantia polymorpha HOM05D006594 ORTHO05D008383 3.8e-26 123.6 516 23.6
unitig_0.g462 Utricularia gibba HOM05D006594 ORTHO05D008383 6.5e-26 122.9 143 49.7
arahy.Tifrunner.gnm1.ann1.A65ZGP Arachis hypogaea HOM05D006594 ORTHO05D008383 1.4e-25 121.7 179 40.2
Lj1E995T0 Lonicera japonica HOM05D006594 ORTHO05D008383 1.6e-24 118.2 131 55.0
arahy.Tifrunner.gnm1.ann1.PB1XHH Arachis hypogaea HOM05D006594 ORTHO05D008383 2.7e-24 117.5 241 34.0
Atru.chr1.484 Acer truncatum HOM05D006594 ORTHO05D008383 5.0e-18 96.7 104 55.8
SMO195G0004 Selaginella moellendorffii HOM05D025148 ORTHO05D050897 6.7e-15 86.3 121 38.8
VMungo0331G1728 Vigna mungo HOM05D006594 ORTHO05D008383 9.7e-14 82.4 90 46.7
EL10Ac3g05712 Beta vulgaris HOM05D006594 ORTHO05D008383 3.7e-13 80.5 119 47.1
Duzib068G0509 Durio zibethinus HOM05D006594 ORTHO05D008383 1.2e-08 65.5 174 31.0
SMO195G0056 Selaginella moellendorffii HOM05D006594 ORTHO05D008383 5.1e-07 60.1 124 31.5
MCO13G538 Micromonas commoda HOM05D006594 ORTHO05D008383 9.7e-06 55.8 480 21.0


User provided reference genes

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