Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_009323 Daucus carota HOM05D003622 ORTHO05D004453 0.0e+00 1657.5 878 100.0
DCAR_020889 Daucus carota HOM05D003622 ORTHO05D004453 0.0e+00 1105.1 889 68.4
Dinv41474 Davidia involucrata HOM05D003622 ORTHO05D004453 2.9e-256 889.0 869 59.0
Dinv36478 Davidia involucrata HOM05D003622 ORTHO05D004453 2.4e-250 869.4 896 57.3
Actinidia21950 Actinidia chinensis HOM05D003622 ORTHO05D004453 2.9e-240 835.9 903 55.0
CSS0022552 Camellia sinensis var. sinensis HOM05D003622 ORTHO05D004453 2.8e-235 819.3 894 54.7
GSVIVG01015594001 Vitis vinifera HOM05D003622 ORTHO05D004453 4.2e-231 805.4 896 54.7
Peaxi162Scf00088g01327 Petunia axillaris HOM05D003622 ORTHO05D004453 8.8e-229 797.7 887 54.1
Nitab4.5_0003393g0070 Nicotiana tabacum HOM05D003622 ORTHO05D004453 6.3e-227 791.6 900 53.9
Cfa003424 Carpinus fangiana HOM05D003622 ORTHO05D004453 1.1e-226 790.8 867 53.7
Thecc.09G132400 Theobroma cacao HOM05D003622 ORTHO05D004453 1.4e-226 790.4 896 53.0
Duzib168G1318 Durio zibethinus HOM05D003622 ORTHO05D004453 7.7e-225 784.6 900 53.0
COL.COLO4_35161 Corchorus olitorius HOM05D003622 ORTHO05D004453 1.0e-224 784.3 901 53.2
Nitab4.5_0002008g0030 Nicotiana tabacum HOM05D003622 ORTHO05D004453 1.3e-224 783.9 900 53.4
Solyc07g007890.3 Solanum lycopersicum HOM05D003622 ORTHO05D004453 1.1e-223 780.8 886 53.3
Sopen07g003790 Solanum pennellii HOM05D003622 ORTHO05D004453 7.2e-223 778.1 886 53.0
Manes.06G047000 Manihot esculenta HOM05D003622 ORTHO05D004453 2.7e-222 776.2 873 53.4
Gorai.010G061100 Gossypium raimondii HOM05D003622 ORTHO05D004453 3.9e-221 772.3 899 52.5
Gohir.A08G088500 Gossypium hirsutum HOM05D003622 ORTHO05D004453 6.7e-221 771.5 891 52.6
PGSC0003DMG400030907 Solanum tuberosum HOM05D003622 ORTHO05D004453 6.7e-221 771.5 885 52.9
Manes.14G116100 Manihot esculenta HOM05D003622 ORTHO05D004453 1.5e-220 770.4 901 53.2
CiPaw.03G248700 Carya illinoinensis HOM05D003622 ORTHO05D004453 3.3e-220 769.2 910 52.2
Gorai.013G235300 Gossypium raimondii HOM05D003622 ORTHO05D004453 5.7e-220 768.5 892 52.0
SalBow1G3694 Salvia bowleyana HOM05D003622 ORTHO05D004453 1.3e-219 767.3 891 52.4
TAR625G0175 Trochodendron aralioides HOM05D003622 ORTHO05D004453 1.3e-219 767.3 891 52.5
Sabra18G0107100 Salix brachista HOM05D003622 ORTHO05D004453 3.7e-219 765.8 862 53.4
VMungo1215G2226 Vigna mungo HOM05D003622 ORTHO05D004453 3.7e-219 765.8 905 50.9
Gohir.D06G052700 Gossypium hirsutum HOM05D003622 ORTHO05D004453 1.8e-218 763.5 899 52.1
CiPaw.04G174900 Carya illinoinensis HOM05D003622 ORTHO05D004453 2.4e-218 763.1 878 53.3
Phvul.003G169000 Phaseolus vulgaris HOM05D003622 ORTHO05D004453 1.2e-217 760.8 905 50.7
Glyma.17G111200 Glycine max HOM05D003622 ORTHO05D004453 2.0e-217 760.0 905 50.9
Potri.018G126100 Populus trichocarpa HOM05D003622 ORTHO05D004453 5.9e-217 758.4 868 52.8
Potri.006G065600 Populus trichocarpa HOM05D003622 ORTHO05D004453 7.7e-217 758.1 871 52.7
Lj4g0015305 Lotus japonicus HOM05D003622 ORTHO05D004453 1.7e-216 756.9 905 50.5
Gohir.A06G053800 Gossypium hirsutum HOM05D003622 ORTHO05D004453 5.0e-216 755.4 899 51.7
Ciclev10007427m.g Citrus clementina HOM05D003622 ORTHO05D004453 6.5e-216 755.0 893 50.8
Glyma.13G160300 Glycine max HOM05D003622 ORTHO05D004453 4.2e-215 752.3 908 50.4
QL02p089888 Quercus lobata HOM05D003622 ORTHO05D004453 5.5e-215 751.9 990 48.8
arahy.Tifrunner.gnm1.ann1.HD4WN1 Arachis hypogaea HOM05D003622 ORTHO05D004453 7.2e-215 751.5 905 50.5
Gohir.A13G200800 Gossypium hirsutum HOM05D003622 ORTHO05D004453 1.2e-214 750.7 890 50.8
Lalb_Chr12g0198231 Lupinus albus HOM05D003622 ORTHO05D004453 3.6e-214 749.2 897 50.8
Rhsim01G0061400 Rhododendron simsii HOM05D003622 ORTHO05D004453 3.6e-214 749.2 1003 47.7
Cc06_g08050 Coffea canephora HOM05D003622 ORTHO05D004453 4.7e-214 748.8 896 51.8
Lalb_Chr13g0301561 Lupinus albus HOM05D003622 ORTHO05D004453 4.7e-214 748.8 907 50.5
CAN.G1266.4 Capsicum annuum HOM05D003622 ORTHO05D004453 8.0e-214 748.0 874 52.1
CANSAT11G0379 Cannabis sativa HOM05D003622 ORTHO05D004453 6.7e-213 745.0 893 51.7
Gorai.004G107500 Gossypium raimondii HOM05D003622 ORTHO05D004453 1.2e-212 744.2 892 51.1
MELO3C010313.2 Cucumis melo HOM05D003622 ORTHO05D004453 1.5e-212 743.8 901 50.8
Sabra06G0047800 Salix brachista HOM05D003622 ORTHO05D004453 1.3e-211 740.7 978 49.6
CsaV3_1G026740 Cucumis sativus L. HOM05D003622 ORTHO05D004453 2.8e-211 739.6 901 50.3
MSTRG.26437 Avicennia marina HOM05D003622 ORTHO05D004453 5.3e-210 735.3 905 50.6
TWI34G1661 Tripterygium wilfordii HOM05D003622 ORTHO05D004453 9.1e-210 734.6 905 49.6
Medtr4g115350 Medicago truncatula HOM05D003622 ORTHO05D004453 1.2e-209 734.2 903 49.2
TWI32G0590 Tripterygium wilfordii HOM05D003622 ORTHO05D004453 2.0e-209 733.4 908 49.6
vmacro07722 Vaccinium macrocarpon HOM05D003622 ORTHO05D004453 2.7e-209 733.0 833 52.6
Gohir.D08G099700 Gossypium hirsutum HOM05D003622 ORTHO05D004453 6.5e-208 728.4 871 51.7
Lalb_Chr07g0179261 Lupinus albus HOM05D003622 ORTHO05D004453 2.1e-206 723.4 905 48.8
arahy.Tifrunner.gnm1.ann1.DJE2D0 Arachis hypogaea HOM05D003622 ORTHO05D004453 2.7e-206 723.0 946 48.0
Sed0001481 Sechium edule HOM05D003622 ORTHO05D004453 8.0e-206 721.5 898 50.1
TWI63G1810 Tripterygium wilfordii HOM05D003622 ORTHO05D004453 4.0e-205 719.2 901 49.4
Atru.chr7.1951 Acer truncatum HOM05D003622 ORTHO05D004453 6.8e-205 718.4 754 54.4
SalBow6G3081 Salvia bowleyana HOM05D003622 ORTHO05D004453 4.4e-204 715.7 886 50.5
Hund09284 Selenicereus undatus HOM05D003622 ORTHO05D004453 1.7e-203 713.8 891 48.3
AUR62013307 Chenopodium quinoa HOM05D003622 ORTHO05D004453 4.8e-203 712.2 892 48.0
Lj7C432T7 Lonicera japonica HOM05D003622 ORTHO05D004453 6.3e-203 711.8 939 48.9
AUR62011177 Chenopodium quinoa HOM05D003622 ORTHO05D004453 3.5e-201 706.1 893 48.4
FAN23G2517 Fragaria x ananassa HOM05D003622 ORTHO05D004453 1.1e-199 701.0 885 48.9
RcHm_v2.0_Chr2g0087611 Rosa chinensis HOM05D003622 ORTHO05D004453 1.1e-199 701.0 871 48.5
Psat0s188g0040 Pisum sativum HOM05D003622 ORTHO05D004453 1.9e-199 700.3 907 48.0
MD15G1166400 Malus domestica HOM05D003622 ORTHO05D004453 4.2e-199 699.1 883 48.7
Sc08g0006260 Simmondsia chinensis HOM05D003622 ORTHO05D004453 7.2e-199 698.4 896 49.4
Hund26549 Selenicereus undatus HOM05D003622 ORTHO05D004453 9.5e-199 698.0 886 47.9
EL10Ac8g18721 Beta vulgaris HOM05D003622 ORTHO05D004453 2.1e-198 696.8 892 48.9
FvH4_1g02580 Fragaria vesca HOM05D003622 ORTHO05D004453 2.1e-198 696.8 885 48.5
FAN19G0217 Fragaria x ananassa HOM05D003622 ORTHO05D004453 2.8e-198 696.4 885 48.4
vmacro06154 Vaccinium macrocarpon HOM05D003622 ORTHO05D004453 1.4e-197 694.1 880 48.8
Prupe.7G248800 Prunus persica HOM05D003622 ORTHO05D004453 1.8e-197 693.7 891 48.1
Hma1.2p1_0343F.1_g130930 Hydrangea macrophylla HOM05D003622 ORTHO05D004453 3.0e-197 693.0 732 55.2
Rhsim03G0251600 Rhododendron simsii HOM05D003622 ORTHO05D004453 3.0e-197 693.0 879 49.1
Ca_06943_v3 Cicer arietinum L. HOM05D003622 ORTHO05D004453 4.0e-197 692.6 860 49.2
Eucgr.C01387 Eucalyptus grandis HOM05D003622 ORTHO05D004453 8.8e-197 691.4 862 50.1
Lalb_Chr11g0072261 Lupinus albus HOM05D003622 ORTHO05D004453 8.8e-197 691.4 904 48.1
FAN28G0611 Fragaria x ananassa HOM05D003622 ORTHO05D004453 1.2e-196 691.0 885 48.4
PSO017G7291 Papaver somniferum HOM05D003622 ORTHO05D004453 1.2e-196 691.0 859 49.8
PSO170G2238 Papaver somniferum HOM05D003622 ORTHO05D004453 1.2e-196 691.0 859 49.7
Migut.K00423 Erythranthe guttata HOM05D003622 ORTHO05D004453 9.8e-196 688.0 886 48.6
MD02G1023300 Malus domestica HOM05D003622 ORTHO05D004453 3.7e-195 686.0 886 48.1
TPR.G24803 Trifolium pratense HOM05D003622 ORTHO05D004453 3.7e-195 686.0 880 47.7
Sed0008371 Sechium edule HOM05D003622 ORTHO05D004453 4.1e-194 682.6 893 48.6
Aqoxy7G03634 Aquilegia oxysepala HOM05D003622 ORTHO05D004453 1.6e-193 680.6 892 47.2
SGA_v2.0_scaffold464G52002 Striga asiatica HOM05D003622 ORTHO05D004453 5.9e-193 678.7 878 48.5
CSS0014966 Camellia sinensis var. sinensis HOM05D003622 ORTHO05D004453 1.3e-192 677.6 648 59.0
PGR102G2297 Punica granatum HOM05D003622 ORTHO05D004453 1.4e-189 667.5 889 47.8
Duzib187G1700 Durio zibethinus HOM05D003622 ORTHO05D004453 1.8e-189 667.2 893 48.5
CSS0042071 Camellia sinensis var. sinensis HOM05D003622 ORTHO05D004453 4.0e-189 666.0 647 58.3
SGA_v2.0_scaffold63G21826 Striga asiatica HOM05D003622 ORTHO05D004453 2.3e-184 650.2 884 45.9
Cpa.g.sc46.43 Carica papaya HOM05D003622 ORTHO05D004453 5.2e-181 639.0 660 57.4
ATR0800G088 Amborella trichopoda HOM05D003622 ORTHO05D004453 9.8e-180 634.8 889 45.7
Actinidia07317 Actinidia chinensis HOM05D003622 ORTHO05D004453 2.2e-179 633.6 750 51.9
Migut.J01215 Erythranthe guttata HOM05D003622 ORTHO05D004453 1.7e-176 624.0 888 45.3
TAR636G0579 Trochodendron aralioides HOM05D003622 ORTHO05D004453 3.6e-174 616.3 612 58.3
HanXRQChr12g0356631 Helianthus annuus HOM05D003622 ORTHO05D004453 4.0e-173 612.8 888 44.4
FAN26G1654 Fragaria x ananassa HOM05D003622 ORTHO05D004453 1.5e-172 610.9 944 43.4
THA.LOC104808966 Tarenaya hassleriana HOM05D003622 ORTHO05D004453 2.6e-172 610.1 907 45.3
Lsat_1_v5_gn_5_91841 Lactuca sativa HOM05D003622 ORTHO05D004453 3.4e-172 609.8 871 45.6
CDE03G0113 Ceratophyllum demersum HOM05D003622 ORTHO05D004453 7.5e-172 608.6 853 44.8
HanXRQChr10g0315861 Helianthus annuus HOM05D003622 ORTHO05D004453 3.7e-171 606.3 881 44.9
MBI13_g37002_MAGBIO Magnolia biondii HOM05D003622 ORTHO05D004453 2.4e-170 603.6 654 54.0
Duzib150G0473 Durio zibethinus HOM05D003622 ORTHO05D004453 9.2e-170 601.7 897 43.6
Gohir.D13G206400 Gossypium hirsutum HOM05D003622 ORTHO05D004453 3.9e-168 596.3 891 43.8
Oeu056946.1 Olea europaea HOM05D003622 ORTHO05D004453 8.1e-166 588.6 648 52.8
ClCG06G011530 Citrullus lanatus HOM05D003622 ORTHO05D004453 1.4e-165 587.8 673 52.5
CDE06G0586 Ceratophyllum demersum HOM05D003622 ORTHO05D004453 1.5e-164 584.3 854 43.6
ECA234G4065 Erigeron canadensis HOM05D003622 ORTHO05D004453 3.2e-162 576.6 862 44.1
Ah.09g224810 Amaranthus hybridus HOM05D003622 ORTHO05D004453 3.9e-160 569.7 646 52.8
Thhalv10003437m.g Eutrema salsugineum HOM05D003622 ORTHO05D004453 5.1e-160 569.3 883 43.3
Oeu052762.1 Olea europaea HOM05D003622 ORTHO05D004453 1.2e-158 564.7 645 51.3
Sp7g06890 Schrenkiella parvula HOM05D003622 ORTHO05D004453 1.2e-158 564.7 886 42.6
CARHR217470 Cardamine hirsuta HOM05D003622 ORTHO05D004453 4.7e-158 562.8 888 42.7
BcaB06g26937 Brassica carinata HOM05D003622 ORTHO05D004453 3.1e-157 560.1 884 42.4
AL7G44290 Arabidopsis lyrata HOM05D003622 ORTHO05D004453 5.2e-157 559.3 886 43.1
C04p43220 Brassica napus HOM05D003622 ORTHO05D004453 4.4e-156 556.2 883 42.6
Nn2g12120 Nelumbo nucifera HOM05D003622 ORTHO05D004453 1.1e-154 551.6 714 49.9
A04p09700 Brassica napus HOM05D003622 ORTHO05D004453 1.9e-154 550.8 881 42.3
AT5G35430 Arabidopsis thaliana HOM05D003622 ORTHO05D004453 4.6e-153 546.2 884 42.2
BcaB02g08053 Brassica carinata HOM05D003622 ORTHO05D004453 6.0e-153 545.8 878 42.7
THA.LOC104826553 Tarenaya hassleriana HOM05D003622 ORTHO05D004453 8.7e-152 542.0 903 42.7
Aa31LG9G18070 Aethionema arabicum HOM05D003622 ORTHO05D004453 3.3e-151 540.0 881 42.8
Carub.0007s3125 Capsella rubella HOM05D003622 ORTHO05D004453 5.6e-151 539.3 886 40.9
Os09g0123100 Oryza sativa ssp. japonica HOM05D003622 ORTHO05D004453 8.7e-144 515.4 862 41.1
Carub.0001s0938 Capsella rubella HOM05D003622 ORTHO05D004453 4.8e-142 509.6 882 38.8
unitig_0.g2718 Utricularia gibba HOM05D003622 ORTHO05D004453 1.3e-136 491.5 911 39.5
SEGI_29075 Sequoiadendron giganteum HOM05D003622 ORTHO05D004453 2.3e-136 490.7 920 39.5
Zm00001eb308130 Zea mays HOM05D003622 ORTHO05D004453 2.3e-136 490.7 871 38.5
Zm00001eb095440 Zea mays HOM05D003622 ORTHO05D004453 1.3e-131 474.9 870 37.5
Oeu055962.1 Olea europaea HOM05D003622 ORTHO05D004453 5.5e-130 469.5 795 42.1
Mapoly0024s0101 Marchantia polymorpha HOM05D003622 ORTHO05D004453 5.9e-124 449.5 897 36.1
BcaC02g09474 Brassica carinata HOM05D003622 ORTHO05D004453 9.7e-111 405.6 887 38.0
HPP92_000465 Vanilla planifolia HOM05D003622 ORTHO05D004453 1.0e-107 395.6 607 42.7
CSS0037660 Camellia sinensis var. sinensis HOM05D003622 ORTHO05D004453 7.2e-106 389.4 442 52.0
Pp3c15_17690 Physcomitrium patens HOM05D003622 ORTHO05D004453 1.2e-105 388.7 879 33.3
Pp3c9_20660 Physcomitrium patens HOM05D003622 ORTHO05D004453 2.1e-105 387.9 874 33.2
SHI22466 Sapria himalayana HOM05D003622 ORTHO05D004453 3.0e-104 384.0 688 41.0
unitig_748.g7167 Utricularia gibba HOM05D003622 ORTHO05D004453 2.9e-99 367.5 466 45.7
SMO351G0297 Selaginella moellendorffii HOM05D003622 ORTHO05D004453 4.2e-98 363.6 867 33.1
BolC4t25899H Brassica oleracea HOM05D003622 ORTHO05D004453 5.2e-96 356.7 662 41.1
BcaC02g09475 Brassica carinata HOM05D003622 ORTHO05D004453 2.0e-95 354.8 823 33.8
BraA04t16629Z Brassica rapa HOM05D003622 ORTHO05D004453 4.8e-94 350.1 620 41.8
Oeu052177.3 Olea europaea HOM05D003622 ORTHO05D004453 2.9e-75 287.7 833 33.1
CBR_g27935 Chara braunii HOM05D000019 ORTHO05D000048 2.5e-66 258.1 670 30.9
MBI13_g02370_MAGBIO Magnolia biondii HOM05D003622 ORTHO05D004453 9.2e-61 239.6 505 39.4
TAR383G0647 Trochodendron aralioides HOM05D003622 ORTHO05D004453 2.2e-46 191.8 196 52.0
unitig_748.g7166 Utricularia gibba HOM05D003622 ORTHO05D004453 1.1e-45 189.5 388 40.2
Actinidia38718 Actinidia chinensis HOM05D003622 ORTHO05D004453 2.7e-44 184.9 297 39.7
SEGI_39442 Sequoiadendron giganteum HOM05D003622 ORTHO05D004453 2.0e-39 168.7 332 39.8
MBI13_g36807_MAGBIO Magnolia biondii HOM05D003622 ORTHO05D004453 1.1e-37 162.9 120 65.8
HPP92_000473 Vanilla planifolia HOM05D003622 ORTHO05D004453 3.5e-36 157.9 235 40.9
AagrBONN_evm.TU.Sc2ySwM_344.2256 Anthoceros agrestis HOM05D003622 ORTHO05D004453 1.7e-35 155.6 309 35.9
BolC4t25898H Brassica oleracea HOM05D003622 ORTHO05D004453 1.2e-23 116.3 371 33.4
C04p43210 Brassica napus HOM05D003622 ORTHO05D004453 4.5e-23 114.4 198 42.4
Cpa.g.sc46.42 Carica papaya HOM05D003622 ORTHO05D004453 1.4e-21 109.4 175 44.6
BraA04t16634Z Brassica rapa HOM05D003622 ORTHO05D004453 3.2e-21 108.2 198 40.9
Haze_25503 Corylus avellana HOM05D003622 ORTHO05D004453 4.2e-21 107.8 117 50.4
A04p09720 Brassica napus HOM05D003622 ORTHO05D004453 7.1e-21 107.1 198 41.4
TAR636G1395 Trochodendron aralioides HOM05D007419 ORTHO05D009327 6.0e-20 104.0 136 47.8
AagrBONN_evm.TU.Sc2ySwM_344.2257 Anthoceros agrestis HOM05D003622 ORTHO05D004453 3.3e-18 98.2 196 35.2
SEGI_04910 Sequoiadendron giganteum HOM05D003622 ORTHO05D004453 4.3e-18 97.8 149 38.9
MBI13_g36805_MAGBIO Magnolia biondii HOM05D003622 ORTHO05D004453 1.2e-15 89.7 153 46.4
ClCG06G011520 Citrullus lanatus HOM05D003622 ORTHO05D004453 6.5e-14 84.0 116 44.0
SEGI_22443 Sequoiadendron giganteum HOM05D003622 ORTHO05D004453 2.1e-12 79.0 127 37.0
GSVIVG01013521001 Vitis vinifera HOM05D004687 ORTHO05D006002 1.0e-11 76.6 63 60.3
ClCG06G011510 Citrullus lanatus HOM05D003622 ORTHO05D004453 1.3e-11 76.3 109 50.5
SHI22468 Sapria himalayana HOM05D003622 ORTHO05D004453 5.7e-10 70.9 114 41.2
Potri.004G126780 Populus trichocarpa HOM05D000030 ORTHO05D000009 9.7e-10 70.1 73 56.2
Potri.004G126740 Populus trichocarpa HOM05D000030 ORTHO05D000009 8.2e-09 67.0 73 54.8
MBI13_g48239_MAGBIO Magnolia biondii HOM05D003622 ORTHO05D004453 1.4e-08 66.2 147 36.1
Actinidia38717 Actinidia chinensis HOM05D003622 ORTHO05D004453 1.2e-07 63.2 156 33.3
SEGI_12874 Sequoiadendron giganteum HOM05D003622 ORTHO05D004453 1.2e-07 63.2 87 47.1
Sabra10G0016400 Salix brachista HOM05D003622 ORTHO05D004453 1.0e-06 60.1 44 61.4


User provided reference genes

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