Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_009295 Daucus carota HOM05D006467 ORTHO05D008012 1.1e-40 169.5 85 100.0
CSS0042234 Camellia sinensis var. sinensis HOM05D006467 ORTHO05D008012 9.3e-27 123.2 80 68.8
SGA_v2.0_scaffold40G15542 Striga asiatica HOM05D006467 ORTHO05D008012 4.6e-26 120.9 79 68.4
QL07p044433 Quercus lobata HOM05D006467 ORTHO05D008012 8.7e-25 116.7 80 63.8
MD04G1097300 Malus domestica HOM05D006467 ORTHO05D008012 1.1e-24 116.3 77 70.1
MD12G1118700 Malus domestica HOM05D006467 ORTHO05D008012 1.9e-24 115.5 74 73.0
Ciclev10013106m.g Citrus clementina HOM05D006467 ORTHO05D008012 4.3e-24 114.4 80 70.0
Actinidia19675 Actinidia chinensis HOM05D006467 ORTHO05D008012 7.4e-24 113.6 78 64.1
vmacro20032 Vaccinium macrocarpon HOM05D006467 ORTHO05D008012 7.4e-24 113.6 84 58.3
Nitab4.5_0000101g0130 Nicotiana tabacum HOM05D006467 ORTHO05D008012 1.3e-23 112.8 78 65.4
Peaxi162Scf00123g00014 Petunia axillaris HOM05D006467 ORTHO05D008012 1.3e-23 112.8 75 66.7
HanXRQChr07g0195271 Helianthus annuus HOM05D006467 ORTHO05D008012 2.1e-23 112.1 73 71.2
TAR369G0155 Trochodendron aralioides HOM05D006467 ORTHO05D008012 2.8e-23 111.7 73 69.9
Nitab4.5_0003923g0010 Nicotiana tabacum HOM05D006467 ORTHO05D008012 3.7e-23 111.3 78 64.1
Potri.006G127800 Populus trichocarpa HOM05D006467 ORTHO05D008012 4.8e-23 110.9 76 65.8
Potri.016G090000 Populus trichocarpa HOM05D006467 ORTHO05D008012 4.8e-23 110.9 76 65.8
Oeu059967.1 Olea europaea HOM05D006467 ORTHO05D008012 6.2e-23 110.5 79 67.1
Thecc.05G060700 Theobroma cacao HOM05D006467 ORTHO05D008012 6.2e-23 110.5 80 57.5
FAN09G2873 Fragaria x ananassa HOM05D006467 ORTHO05D008012 8.2e-23 110.2 78 64.1
CiPaw.09G176000 Carya illinoinensis HOM05D006467 ORTHO05D008012 1.1e-22 109.8 80 60.0
COL.COLO4_27023 Corchorus olitorius HOM05D006467 ORTHO05D008012 1.1e-22 109.8 80 56.2
FvH4_6g15910 Fragaria vesca HOM05D006467 ORTHO05D008012 1.1e-22 109.8 78 65.4
FAN14G3947 Fragaria x ananassa HOM05D006467 ORTHO05D008012 1.1e-22 109.8 78 65.4
Nn2g13105 Nelumbo nucifera HOM05D006467 ORTHO05D008012 1.1e-22 109.8 74 67.6
Prupe.6G236600 Prunus persica HOM05D006467 ORTHO05D008012 1.1e-22 109.8 78 62.8
Atru.chr8.1867 Acer truncatum HOM05D006467 ORTHO05D008012 1.4e-22 109.4 78 61.5
Dinv37285 Davidia involucrata HOM05D006467 ORTHO05D008012 1.4e-22 109.4 80 63.8
Cpa.g.sc102.12 Carica papaya HOM05D006467 ORTHO05D008012 3.1e-22 108.2 78 64.1
Lj5g0010745 Lotus japonicus HOM05D006467 ORTHO05D008012 3.1e-22 108.2 81 61.7
RcHm_v2.0_Chr3g0469601 Rosa chinensis HOM05D006467 ORTHO05D008012 3.1e-22 108.2 78 64.1
TAR623G0732 Trochodendron aralioides HOM05D006467 ORTHO05D008012 3.1e-22 108.2 73 65.8
Cfa017565 Carpinus fangiana HOM05D006467 ORTHO05D008012 4.0e-22 107.8 80 58.8
Haze_20589 Corylus avellana HOM05D006467 ORTHO05D008012 4.0e-22 107.8 80 58.8
FAN02G4276 Fragaria x ananassa HOM05D006467 ORTHO05D008012 4.0e-22 107.8 78 62.8
Sabra06G0100500 Salix brachista HOM05D006467 ORTHO05D008012 4.0e-22 107.8 76 65.8
Ca_11474_v3 Cicer arietinum L. HOM05D006467 ORTHO05D008012 5.3e-22 107.5 81 58.0
Manes.08G007300 Manihot esculenta HOM05D006467 ORTHO05D008012 5.3e-22 107.5 76 63.2
PSO063G5019 Papaver somniferum HOM05D006467 ORTHO05D008012 6.9e-22 107.1 73 68.5
PSO339G1849 Papaver somniferum HOM05D006467 ORTHO05D008012 6.9e-22 107.1 73 68.5
TPR.G21203 Trifolium pratense HOM05D006467 ORTHO05D008012 6.9e-22 107.1 81 59.3
Hma1.2p1_0614F.1_g189470 Hydrangea macrophylla HOM05D006467 ORTHO05D008012 9.0e-22 106.7 78 66.7
Lsat_1_v5_gn_2_109060 Lactuca sativa HOM05D006467 ORTHO05D008012 9.0e-22 106.7 75 65.3
Lj2A112T40 Lonicera japonica HOM05D006467 ORTHO05D008012 1.2e-21 106.3 73 64.4
Medtr1g064490 Medicago truncatula HOM05D006467 ORTHO05D008012 1.2e-21 106.3 81 59.3
CsaV3_3G035800 Cucumis sativus L. HOM05D006467 ORTHO05D008012 1.5e-21 105.9 78 59.0
MSTRG.19165 Avicennia marina HOM05D006467 ORTHO05D008012 2.0e-21 105.5 75 64.0
EL10Ac7g16554 Beta vulgaris HOM05D006467 ORTHO05D008012 2.0e-21 105.5 78 61.5
Gohir.D09G145300 Gossypium hirsutum HOM05D006467 ORTHO05D008012 2.0e-21 105.5 80 60.0
Gorai.006G166500 Gossypium raimondii HOM05D006467 ORTHO05D008012 2.0e-21 105.5 80 60.0
A03p20520 Brassica napus HOM05D006467 ORTHO05D008012 2.6e-21 105.1 76 60.5
BraA03t11294Z Brassica rapa HOM05D006467 ORTHO05D008012 2.6e-21 105.1 76 60.5
MELO3C009340.2 Cucumis melo HOM05D006467 ORTHO05D008012 2.6e-21 105.1 78 59.0
Dinv35529 Davidia involucrata HOM05D006467 ORTHO05D008012 2.6e-21 105.1 73 63.0
Migut.J00532 Erythranthe guttata HOM05D006467 ORTHO05D008012 2.6e-21 105.1 77 64.9
Gohir.A04G074100 Gossypium hirsutum HOM05D006467 ORTHO05D008012 2.6e-21 105.1 77 58.4
AL4G33560 Arabidopsis lyrata HOM05D006467 ORTHO05D008012 3.4e-21 104.8 76 61.8
AUR62033514 Chenopodium quinoa HOM05D006467 ORTHO05D008012 3.4e-21 104.8 78 60.3
Gohir.D04G113200 Gossypium hirsutum HOM05D006467 ORTHO05D008012 3.4e-21 104.8 77 57.1
Gorai.009G417600 Gossypium raimondii HOM05D006467 ORTHO05D008012 3.4e-21 104.8 77 57.1
BcaC01g06644 Brassica carinata HOM05D006467 ORTHO05D008012 5.8e-21 104.0 76 59.2
CARHR131710 Cardamine hirsuta HOM05D006467 ORTHO05D008012 5.8e-21 104.0 76 60.5
Dinv35757 Davidia involucrata HOM05D006467 ORTHO05D008012 5.8e-21 104.0 73 63.0
Thhalv10017389m.g Eutrema salsugineum HOM05D006467 ORTHO05D008012 5.8e-21 104.0 76 60.5
Duzib128G1557 Durio zibethinus HOM05D006467 ORTHO05D008012 7.6e-21 103.6 80 56.2
AT2G37195 Arabidopsis thaliana HOM05D006467 ORTHO05D008012 1.0e-20 103.2 77 59.7
Carub.0004s1909 Capsella rubella HOM05D006467 ORTHO05D008012 1.0e-20 103.2 76 59.2
AUR62028561 Chenopodium quinoa HOM05D006467 ORTHO05D008012 1.0e-20 103.2 78 59.0
Sp4g19510 Schrenkiella parvula HOM05D006467 ORTHO05D008012 1.0e-20 103.2 76 60.5
C03p24120 Brassica napus HOM05D006467 ORTHO05D008012 1.3e-20 102.8 76 59.2
BolC3t14804H Brassica oleracea HOM05D006467 ORTHO05D008012 1.3e-20 102.8 76 59.2
ClCG10G020300 Citrullus lanatus HOM05D006467 ORTHO05D008012 1.3e-20 102.8 78 59.0
Aqoxy1G01232 Aquilegia oxysepala HOM05D006467 ORTHO05D008012 1.7e-20 102.4 75 61.3
Sed0017827 Sechium edule HOM05D006467 ORTHO05D008012 1.7e-20 102.4 78 56.4
Lalb_Chr21g0314871 Lupinus albus HOM05D006467 ORTHO05D008012 2.2e-20 102.1 81 59.3
Sopen09g002640 Solanum pennellii HOM05D006467 ORTHO05D008012 2.2e-20 102.1 76 61.8
Hund20246 Selenicereus undatus HOM05D006467 ORTHO05D008012 2.9e-20 101.7 81 51.9
TWI77G0724 Tripterygium wilfordii HOM05D006467 ORTHO05D008012 2.9e-20 101.7 76 57.9
Sabra16G0095600 Salix brachista HOM05D006467 ORTHO05D008012 3.8e-20 101.3 93 54.8
Aa31LG5G22520 Aethionema arabicum HOM05D006467 ORTHO05D008012 4.9e-20 100.9 76 61.8
THA.LOC104823447 Tarenaya hassleriana HOM05D006467 ORTHO05D008012 4.9e-20 100.9 78 59.0
Glyma.13G140300 Glycine max HOM05D006467 ORTHO05D008012 6.5e-20 100.5 81 55.6
Solyc09g007800.3 Solanum lycopersicum HOM05D006467 ORTHO05D008012 6.5e-20 100.5 76 60.5
PGSC0003DMG400021546 Solanum tuberosum HOM05D006467 ORTHO05D008012 6.5e-20 100.5 76 60.5
ECA238G0062 Erigeron canadensis HOM05D006467 ORTHO05D008012 8.4e-20 100.1 75 60.0
Glyma.10G053300 Glycine max HOM05D006467 ORTHO05D008012 8.4e-20 100.1 81 55.6
SalBow8G4982 Salvia bowleyana HOM05D006467 ORTHO05D008012 8.4e-20 100.1 75 61.3
Eucgr.K03249 Eucalyptus grandis HOM05D006467 ORTHO05D008012 1.4e-19 99.4 76 56.6
arahy.Tifrunner.gnm1.ann1.HNS49Q Arachis hypogaea HOM05D006467 ORTHO05D008012 1.9e-19 99.0 73 60.3
arahy.Tifrunner.gnm1.ann1.RH0WXQ Arachis hypogaea HOM05D006467 ORTHO05D008012 1.9e-19 99.0 73 60.3
arahy.Tifrunner.gnm1.ann1.VPUZ6C Arachis hypogaea HOM05D006467 ORTHO05D008012 1.9e-19 99.0 73 60.3
CAN.G888.4 Capsicum annuum HOM05D006467 ORTHO05D008012 1.9e-19 99.0 75 60.0
Gohir.A09G149400 Gossypium hirsutum HOM05D006467 ORTHO05D008012 1.9e-19 99.0 80 56.2
Psat6g070840 Pisum sativum HOM05D006467 ORTHO05D008012 1.9e-19 99.0 73 60.3
GSVIVG01025685001 Vitis vinifera HOM05D006467 ORTHO05D008012 1.9e-19 99.0 62 69.4
VMungo0720G0455 Vigna mungo HOM05D006467 ORTHO05D008012 4.2e-19 97.8 81 51.9
Nn2g10804 Nelumbo nucifera HOM05D006467 ORTHO05D008012 9.3e-19 96.7 73 58.9
CANSAT80G0273 Cannabis sativa HOM05D006467 ORTHO05D008012 1.2e-18 96.3 75 57.3
Sc02g0001830 Simmondsia chinensis HOM05D006467 ORTHO05D008012 1.2e-18 96.3 75 57.3
Ah.15g092380 Amaranthus hybridus HOM05D006467 ORTHO05D008012 2.1e-18 95.5 78 56.4
MBI07_g19293_MAGBIO Magnolia biondii HOM05D006467 ORTHO05D008012 2.7e-18 95.1 78 56.4
PGR142G2369 Punica granatum HOM05D006467 ORTHO05D008012 3.5e-18 94.7 76 59.2
Phvul.007G220100 Phaseolus vulgaris HOM05D006467 ORTHO05D008012 1.3e-17 92.8 81 51.9
unitig_27.g25371 Utricularia gibba HOM05D006467 ORTHO05D008012 3.3e-16 88.2 73 54.8
Cc06_g03930 Coffea canephora HOM05D006467 ORTHO05D008012 4.3e-16 87.8 64 60.9
ATR0048G054 Amborella trichopoda HOM05D006467 ORTHO05D008012 2.6e-13 78.6 66 53.0
HPP92_022407 Vanilla planifolia HOM05D006467 ORTHO05D008012 2.6e-13 78.6 76 46.1
HPP92_027503 Vanilla planifolia HOM05D006467 ORTHO05D008012 3.4e-13 78.2 76 44.7
Zm00001eb191980 Zea mays HOM05D006467 ORTHO05D008012 1.1e-11 73.2 82 42.7
Os02g0805700 Oryza sativa ssp. japonica HOM05D006467 ORTHO05D008012 4.2e-11 71.2 80 42.5
Zm00001eb258270 Zea mays HOM05D006467 ORTHO05D008012 3.6e-10 68.2 82 40.2
PSO063G7135 Papaver somniferum HOM05D000530 ORTHO05D000621 2.5e-08 62.0 35 80.0
BcaC03g13318 Brassica carinata HOM05D006467 ORTHO05D008012 5.7e-08 60.8 47 61.7
BcaC03g13319 Brassica carinata HOM05D006467 ORTHO05D008012 5.7e-08 60.8 47 61.7
FvH4_1g27957 Fragaria vesca HOM05D000871 ORTHO05D008012 9.7e-08 60.1 52 57.7
FvH4_1g28030 Fragaria vesca HOM05D000871 ORTHO05D008012 9.7e-08 60.1 52 57.7
FAN26G0965 Fragaria x ananassa HOM05D000871 ORTHO05D011596 9.7e-08 60.1 52 57.7
BcaC08g43911 Brassica carinata HOM05D006467 ORTHO05D008012 2.2e-07 58.9 47 61.7
C07p17010 Brassica napus HOM05D006467 ORTHO05D008012 4.8e-07 57.8 41 68.3
BolC1t01590H Brassica oleracea HOM05D006467 ORTHO05D008012 4.1e-06 54.7 41 65.9
arahy.Tifrunner.gnm1.ann1.LA4XPU Arachis hypogaea HOM05D006467 ORTHO05D008012 5.3e-06 54.3 33 72.7


User provided reference genes

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