Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_009253 Daucus carota HOM05D004269 ORTHO05D007106 7.7e-264 913.3 475 100.0
Dinv35635 Davidia involucrata HOM05D004269 ORTHO05D007106 5.5e-209 731.1 476 81.9
ECA238G4253 Erigeron canadensis HOM05D004269 ORTHO05D007106 3.2e-201 705.3 467 78.4
HanXRQChr14g0453741 Helianthus annuus HOM05D004269 ORTHO05D007106 3.2e-201 705.3 475 76.8
CSS0004421 Camellia sinensis var. sinensis HOM05D004269 ORTHO05D007106 1.2e-200 703.4 441 82.8
Lj2C99G10 Lonicera japonica HOM05D004269 ORTHO05D007106 6.0e-200 701.0 441 82.1
GSVIVG01025529001 Vitis vinifera HOM05D004269 ORTHO05D007106 3.3e-198 695.3 467 78.8
PGSC0003DMG400008852 Solanum tuberosum HOM05D004269 ORTHO05D007106 9.0e-196 687.2 476 77.9
TAR369G0704 Trochodendron aralioides HOM05D004269 ORTHO05D007106 1.2e-195 686.8 469 77.4
MBI14_g24308_MAGBIO Magnolia biondii HOM05D004269 ORTHO05D007106 2.0e-195 686.0 468 76.9
Solyc09g010420.4 Solanum lycopersicum HOM05D004269 ORTHO05D007106 7.6e-195 684.1 476 77.5
MSTRG.19100 Avicennia marina HOM05D004269 ORTHO05D007106 1.0e-194 683.7 475 76.0
Potri.012G115900 Populus trichocarpa HOM05D004269 ORTHO05D007106 8.5e-194 680.6 463 77.3
Atru.chr8.1955 Acer truncatum HOM05D004269 ORTHO05D007106 1.9e-193 679.5 473 75.3
Sopen09g005160 Solanum pennellii HOM05D004269 ORTHO05D007106 1.9e-193 679.5 475 77.3
Cc06_g02960 Coffea canephora HOM05D004269 ORTHO05D007106 3.2e-193 678.7 475 76.4
Peaxi162Scf00039g01234 Petunia axillaris HOM05D004269 ORTHO05D007106 3.2e-193 678.7 443 79.7
Lsat_1_v5_gn_2_110500 Lactuca sativa HOM05D004269 ORTHO05D007106 5.5e-193 677.9 474 74.5
Cpa.g.sc11.168 Carica papaya HOM05D004269 ORTHO05D007106 3.6e-192 675.2 444 78.8
QL07p047335 Quercus lobata HOM05D004269 ORTHO05D007106 6.1e-192 674.5 443 79.7
Gohir.A09G158200 Gossypium hirsutum HOM05D004269 ORTHO05D007106 1.0e-191 673.7 475 75.6
Aqoxy2G02034 Aquilegia oxysepala HOM05D004269 ORTHO05D007106 3.9e-191 671.8 473 74.4
QL05p010548 Quercus lobata HOM05D004269 ORTHO05D007106 6.7e-191 671.0 443 79.2
Prupe.6G250400 Prunus persica HOM05D004269 ORTHO05D007106 1.5e-190 669.8 475 75.2
Gohir.D09G153600 Gossypium hirsutum HOM05D004269 ORTHO05D007106 3.3e-190 668.7 469 76.1
MD04G1121900 Malus domestica HOM05D004269 ORTHO05D007106 9.7e-190 667.2 444 77.7
Gorai.006G175100 Gossypium raimondii HOM05D004269 ORTHO05D007106 1.6e-189 666.4 469 75.5
CDE05G0081 Ceratophyllum demersum HOM05D004269 ORTHO05D007106 8.2e-189 664.1 444 76.1
TWI74G1158 Tripterygium wilfordii HOM05D004269 ORTHO05D007106 8.2e-189 664.1 471 74.3
Lalb_Chr06g0171031 Lupinus albus HOM05D004269 ORTHO05D007106 2.4e-188 662.5 474 73.2
AUR62031166 Chenopodium quinoa HOM05D004269 ORTHO05D007106 3.1e-188 662.1 469 74.4
Thecc.05G044300 Theobroma cacao HOM05D004269 ORTHO05D007106 3.1e-188 662.1 467 75.2
Ciclev10011653m.g Citrus clementina HOM05D004269 ORTHO05D007106 4.1e-188 661.8 465 75.7
MD12G1138500 Malus domestica HOM05D004269 ORTHO05D007106 4.1e-188 661.8 475 73.3
PSO206G0015 Papaver somniferum HOM05D004269 ORTHO05D007106 6.9e-188 661.0 468 73.9
FvH4_6g14300 Fragaria vesca HOM05D004269 ORTHO05D007106 9.1e-188 660.6 441 77.3
RcHm_v2.0_Chr3g0467271 Rosa chinensis HOM05D004269 ORTHO05D007106 9.1e-188 660.6 444 77.0
AUR62036580 Chenopodium quinoa HOM05D004269 ORTHO05D007106 1.5e-187 659.8 477 73.6
CANSAT56G4185 Cannabis sativa HOM05D004269 ORTHO05D007106 2.0e-187 659.4 425 79.1
QL09p012946 Quercus lobata HOM05D004269 ORTHO05D007106 2.6e-187 659.1 446 76.9
Eucgr.K03158 Eucalyptus grandis HOM05D004269 ORTHO05D007106 4.5e-187 658.3 471 72.8
Sabra12G0084000 Salix brachista HOM05D004269 ORTHO05D007106 1.3e-186 656.8 511 70.8
Cfa017428 Carpinus fangiana HOM05D004269 ORTHO05D007106 1.7e-186 656.4 467 74.3
ClCG10G020940 Citrullus lanatus HOM05D004269 ORTHO05D007106 3.8e-186 655.2 443 78.6
Medtr1g068845 Medicago truncatula HOM05D004269 ORTHO05D007106 6.5e-186 654.4 470 74.7
Ca_09614_v3 Cicer arietinum L. HOM05D004269 ORTHO05D007106 8.5e-186 654.1 467 74.9
Sed0027746 Sechium edule HOM05D004269 ORTHO05D007106 1.4e-185 653.3 443 78.8
Lj5g0017615 Lotus japonicus HOM05D004269 ORTHO05D007106 2.5e-185 652.5 423 80.1
CAN.G97.19 Capsicum annuum HOM05D004269 ORTHO05D007106 7.2e-185 651.0 463 76.0
Glyma.10G044300 Glycine max HOM05D004269 ORTHO05D007106 7.2e-185 651.0 470 74.3
FAN14G0717 Fragaria x ananassa HOM05D004269 ORTHO05D007106 9.4e-185 650.6 441 76.6
PSO339G5566 Papaver somniferum HOM05D004269 ORTHO05D007106 1.2e-184 650.2 494 70.4
Haze_20743 Corylus avellana HOM05D004269 ORTHO05D007106 6.1e-184 647.9 479 72.0
Glyma.13G131900 Glycine max HOM05D004269 ORTHO05D007106 1.0e-183 647.1 453 75.3
PGR044G1633 Punica granatum HOM05D004269 ORTHO05D007106 1.0e-183 647.1 427 78.0
Hund02377 Selenicereus undatus HOM05D004269 ORTHO05D007106 1.0e-183 647.1 460 73.5
FAN02G4217 Fragaria x ananassa HOM05D004269 ORTHO05D007106 3.0e-183 645.6 441 76.2
Psat6g067760 Pisum sativum HOM05D004269 ORTHO05D007106 3.0e-183 645.6 466 72.1
THA.LOC104815237 Tarenaya hassleriana HOM05D004269 ORTHO05D007106 3.9e-183 645.2 444 76.1
Carub.0004s1942 Capsella rubella HOM05D004269 ORTHO05D007106 5.1e-183 644.8 444 76.6
MELO3C009277.2 Cucumis melo HOM05D004269 ORTHO05D007106 5.1e-183 644.8 443 76.1
Phvul.007G158000 Phaseolus vulgaris HOM05D004269 ORTHO05D007106 8.8e-183 644.0 470 73.0
Nitab4.5_0002077g0090 Nicotiana tabacum HOM05D004269 ORTHO05D007106 1.5e-182 643.3 409 81.7
CsaV3_3G035070 Cucumis sativus L. HOM05D004269 ORTHO05D007106 2.0e-182 642.9 444 75.7
BraA04t18341Z Brassica rapa HOM05D004269 ORTHO05D007106 5.7e-182 641.3 468 72.6
arahy.Tifrunner.gnm1.ann1.5YT5MY Arachis hypogaea HOM05D004269 ORTHO05D007106 9.7e-182 640.6 446 74.9
A04p28640 Brassica napus HOM05D004269 ORTHO05D007106 9.7e-182 640.6 468 72.9
Aa31LG5G19670 Aethionema arabicum HOM05D004269 ORTHO05D007106 2.2e-181 639.4 444 74.8
BcaB06g28999 Brassica carinata HOM05D004269 ORTHO05D007106 2.2e-181 639.4 439 76.1
BolC4t28100H Brassica oleracea HOM05D004269 ORTHO05D007106 2.2e-181 639.4 468 72.6
SGA_v2.0_scaffold75G24934 Striga asiatica HOM05D004269 ORTHO05D007106 2.2e-181 639.4 486 70.8
vmacro08669 Vaccinium macrocarpon HOM05D004269 ORTHO05D007106 2.8e-181 639.0 485 72.2
Nn2g10437 Nelumbo nucifera HOM05D004269 ORTHO05D007106 4.8e-181 638.3 422 79.1
arahy.Tifrunner.gnm1.ann1.FJP50F Arachis hypogaea HOM05D004269 ORTHO05D007106 6.3e-181 637.9 446 74.7
BcaC02g11857 Brassica carinata HOM05D004269 ORTHO05D007106 1.4e-180 636.7 467 72.6
A05p08460 Brassica napus HOM05D004269 ORTHO05D007106 2.4e-180 636.0 467 72.6
BraA05t19815Z Brassica rapa HOM05D004269 ORTHO05D007106 2.4e-180 636.0 467 72.8
ATR0559G147 Amborella trichopoda HOM05D004269 ORTHO05D007106 3.1e-180 635.6 435 74.3
CiPaw.09G188900 Carya illinoinensis HOM05D004269 ORTHO05D007106 4.1e-180 635.2 439 75.4
AL4G33990 Arabidopsis lyrata HOM05D004269 ORTHO05D007106 5.3e-180 634.8 469 73.6
Migut.J00361 Erythranthe guttata HOM05D004269 ORTHO05D007106 5.3e-180 634.8 423 78.5
CARHR132110 Cardamine hirsuta HOM05D004269 ORTHO05D007106 9.1e-180 634.0 444 74.1
C04p10550 Brassica napus HOM05D004269 ORTHO05D007106 2.6e-179 632.5 467 72.6
Sp4g19820 Schrenkiella parvula HOM05D004269 ORTHO05D007106 4.5e-179 631.7 467 72.2
BcaB02g09282 Brassica carinata HOM05D004269 ORTHO05D007106 1.0e-178 630.6 467 72.2
BolC4t22646H Brassica oleracea HOM05D004269 ORTHO05D007106 1.3e-178 630.2 446 74.4
EL10Ac8g18791 Beta vulgaris HOM05D004269 ORTHO05D007106 5.0e-178 628.2 467 70.0
Duzib128G0641 Durio zibethinus HOM05D004269 ORTHO05D007106 5.0e-178 628.2 444 75.0
Thhalv10016608m.g Eutrema salsugineum HOM05D004269 ORTHO05D007106 2.7e-176 622.5 444 74.3
Os03g0279400 Oryza sativa ssp. japonica HOM05D004269 ORTHO05D007106 6.1e-176 621.3 428 74.5
C04p65960 Brassica napus HOM05D004269 ORTHO05D007106 2.3e-175 619.4 494 68.2
SalBow3G0454 Salvia bowleyana HOM05D004269 ORTHO05D007106 3.0e-175 619.0 555 63.4
Manes.09G086800 Manihot esculenta HOM05D004269 ORTHO05D007106 1.1e-174 617.1 399 80.2
Mapoly0082s0028 Marchantia polymorpha HOM05D004269 ORTHO05D007106 3.3e-174 615.5 422 74.4
Pp3c9_2270 Physcomitrium patens HOM05D004269 ORTHO05D007106 1.0e-170 604.0 458 69.2
AT2G37500 Arabidopsis thaliana HOM05D004269 ORTHO05D007106 1.3e-170 603.6 406 77.8
Sc20g0004610 Simmondsia chinensis HOM05D004269 ORTHO05D007106 5.2e-167 591.7 417 76.0
TAR623G0301 Trochodendron aralioides HOM05D004269 ORTHO05D007106 4.4e-166 588.6 415 76.1
Nitab4.5_0009149g0030 Nicotiana tabacum HOM05D004269 ORTHO05D007106 2.2e-162 576.2 409 75.1
SMO347G0094 Selaginella moellendorffii HOM05D004269 ORTHO05D007106 5.5e-161 571.6 424 69.6
TPR.G11806 Trifolium pratense HOM05D004269 ORTHO05D007106 1.3e-157 560.5 415 72.8
HPP92_001489 Vanilla planifolia HOM05D004269 ORTHO05D007106 2.2e-157 559.7 386 73.3
TAR623G0331 Trochodendron aralioides HOM05D004269 ORTHO05D007106 1.4e-156 557.0 396 76.3
arahy.Tifrunner.gnm1.ann1.L55DKK Arachis hypogaea HOM05D004269 ORTHO05D007106 2.4e-156 556.2 395 74.4
unitig_578.g15701 Utricularia gibba HOM05D004269 ORTHO05D007106 1.0e-154 550.8 446 66.4
Actinidia05298 Actinidia chinensis HOM05D004269 ORTHO05D007106 3.0e-143 512.7 483 63.6
Dinv37204 Davidia involucrata HOM05D004269 ORTHO05D007106 8.9e-143 511.1 350 80.0
AagrBONN_evm.TU.Sc2ySwM_228.5429 Anthoceros agrestis HOM05D004269 ORTHO05D007106 3.6e-136 489.2 360 70.8
Cre16.g694850 Chlamydomonas reinhardtii HOM05D004269 ORTHO05D007106 4.4e-134 482.3 424 58.7
Zm00001eb012670 Zea mays HOM05D004269 ORTHO05D007106 4.4e-126 455.7 329 70.5
EL10Ac7g17097 Beta vulgaris HOM05D004269 ORTHO05D007106 1.7e-125 453.8 431 60.6
PRCOL_00001324 Prasinoderma coloniale HOM05D004269 ORTHO05D007106 2.4e-124 449.9 435 57.9
MCO14G482 Micromonas commoda HOM05D004269 ORTHO05D007106 1.4e-119 434.1 435 55.6
VMungo0720G1352 Vigna mungo HOM05D004269 ORTHO05D007106 1.1e-113 414.5 325 70.2
Hma1.2p1_1535F.1_g289500 Hydrangea macrophylla HOM05D004269 ORTHO05D007106 4.6e-107 392.5 254 81.9
SHI29092 Sapria himalayana HOM05D004269 ORTHO05D007106 1.9e-100 370.5 388 56.7
Actinidia13128 Actinidia chinensis HOM05D004269 ORTHO05D007106 2.2e-85 320.5 237 73.8
Actinidia13127 Actinidia chinensis HOM05D004269 ORTHO05D007106 8.7e-82 308.5 202 78.7
Rhsim04G0153900 Rhododendron simsii HOM05D004269 ORTHO05D007106 7.4e-81 305.4 232 74.6
Hma1.2p1_1535F.1_g289480 Hydrangea macrophylla HOM05D004269 ORTHO05D007106 1.3e-80 304.7 195 79.0
Hma1.2p1_1004F.1_g246860 Hydrangea macrophylla HOM05D004269 ORTHO05D007106 5.7e-73 279.3 204 71.1
CBR_g37471 Chara braunii HOM05D004269 ORTHO05D007106 1.5e-70 271.2 218 64.2
Hma1.2p1_1004F.1_g246850 Hydrangea macrophylla HOM05D004269 ORTHO05D007106 1.8e-63 247.7 182 76.9
VMungo0720G1280 Vigna mungo HOM05D004269 ORTHO05D007106 1.8e-58 231.1 147 76.2
Cfa024613 Carpinus fangiana HOM05D004269 ORTHO05D007106 4.5e-54 216.5 455 36.3
SEGI_16124 Sequoiadendron giganteum HOM05D004269 ORTHO05D007106 3.7e-48 196.8 124 76.6
SEGI_30751 Sequoiadendron giganteum HOM05D004269 ORTHO05D007106 1.5e-36 158.3 137 63.5
SEGI_32622 Sequoiadendron giganteum HOM05D004269 ORTHO05D007106 1.5e-36 158.3 137 63.5
Lsat_1_v5_gn_4_171201 Lactuca sativa HOM05D004269 ORTHO05D000661 4.2e-36 156.8 263 41.1
Lsat_1_v5_gn_7_20760 Lactuca sativa HOM05D004269 ORTHO05D020149 4.0e-34 150.2 158 58.9
Lsat_1_v5_gn_6_110780 Lactuca sativa HOM05D004269 ORTHO05D000661 2.6e-33 147.5 263 39.2
Potri.015G112400 Populus trichocarpa HOM05D004269 ORTHO05D007106 2.7e-30 137.5 129 58.9
Cc02_g24250 Coffea canephora HOM05D004269 ORTHO05D007106 5.9e-30 136.3 102 69.6
SEGI_12229 Sequoiadendron giganteum HOM05D004269 ORTHO05D007106 5.0e-29 133.3 113 62.8
QL09p013305 Quercus lobata HOM05D004269 ORTHO05D010618 7.0e-23 112.8 101 59.4
Cfa017427 Carpinus fangiana HOM05D004269 ORTHO05D021565 7.8e-22 109.4 101 55.4
Lsat_1_v5_gn_1_18180 Lactuca sativa HOM05D000819 ORTHO05D000661 5.0e-21 106.7 120 55.0
SalBow6G0271 Salvia bowleyana HOM05D004269 ORTHO05D000571 3.6e-19 100.5 87 59.8
Lsat_1_v5_gn_1_104560 Lactuca sativa HOM05D001098 ORTHO05D003515 6.4e-16 89.7 46 84.8
Lsat_1_v5_gn_9_124300 Lactuca sativa HOM05D001098 ORTHO05D003515 6.4e-16 89.7 46 84.8
C02p59220 Brassica napus HOM05D004269 ORTHO05D013520 5.1e-13 80.1 78 56.4
AUR62004247 Chenopodium quinoa HOM05D004269 ORTHO05D021565 1.9e-12 78.2 73 56.2
AUR62035732 Chenopodium quinoa HOM05D004269 ORTHO05D021565 1.9e-12 78.2 73 56.2
ECA236G0058 Erigeron canadensis HOM05D000039 ORTHO05D000370 9.5e-12 75.9 70 58.6
Lsat_1_v5_gn_7_15681 Lactuca sativa HOM05D004269 ORTHO05D007106 1.6e-11 75.1 167 36.5
BcaB08g34435 Brassica carinata HOM05D004269 ORTHO05D000659 2.8e-11 74.3 59 55.9
BcaC01g04800 Brassica carinata HOM05D004269 ORTHO05D013520 6.2e-11 73.2 129 41.9
Sabra15G0134100 Salix brachista HOM05D004269 ORTHO05D007106 1.1e-10 72.4 87 50.6
BcaC05g28037 Brassica carinata HOM05D004269 ORTHO05D013520 1.8e-10 71.6 64 60.9
C01p38510 Brassica napus HOM05D004269 ORTHO05D013520 1.8e-10 71.6 129 41.1
C04p14230 Brassica napus HOM05D004269 ORTHO05D013520 1.8e-10 71.6 129 41.1
C07p30140 Brassica napus HOM05D004269 ORTHO05D013520 1.8e-10 71.6 64 60.9
BolC5t30237H Brassica oleracea HOM05D004269 ORTHO05D013520 1.8e-10 71.6 129 41.1
BolC5t33714H Brassica oleracea HOM05D004269 ORTHO05D013520 1.8e-10 71.6 64 60.9
BcaC06g34343 Brassica carinata HOM05D004269 ORTHO05D013520 2.3e-10 71.2 72 56.9
C02p38620 Brassica napus HOM05D004269 ORTHO05D013520 2.3e-10 71.2 129 41.1
C05p40550 Brassica napus HOM05D004269 ORTHO05D013520 2.3e-10 71.2 63 61.9
BolC5t33363H Brassica oleracea HOM05D004269 ORTHO05D013520 2.3e-10 71.2 64 60.9
C05p46330 Brassica napus HOM05D004269 ORTHO05D013520 3.1e-10 70.9 129 40.3
Lsat_1_v5_gn_3_125120 Lactuca sativa HOM05D004623 ORTHO05D005100 1.2e-09 68.9 176 32.4
COL.COLO4_35964 Corchorus olitorius HOM05D001211 ORTHO05D001084 1.7e-08 65.1 76 51.3
BolC6t36588H Brassica oleracea HOM05D004269 ORTHO05D013520 8.3e-08 62.8 131 38.9
Glyma.18G131800 Glycine max HOM05D004269 ORTHO05D213362 1.1e-07 62.4 46 60.9
Lsat_1_v5_gn_3_20180 Lactuca sativa HOM05D000819 ORTHO05D000661 1.2e-06 58.9 63 54.0
CARHR249580 Cardamine hirsuta HOM05D004269 ORTHO05D021565 2.7e-06 57.8 48 60.4
BcaC04g20716 Brassica carinata HOM05D004269 ORTHO05D013520 7.8e-06 56.2 45 62.2


User provided reference genes

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