Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_009201 Daucus carota HOM05D004174 ORTHO05D004624 8.8e-229 796.6 394 100.0
Dinv36548 Davidia involucrata HOM05D004174 ORTHO05D004624 1.0e-160 570.5 393 71.0
vmacro06177 Vaccinium macrocarpon HOM05D004174 ORTHO05D004624 4.0e-157 558.5 390 69.5
DCAR_017828 Daucus carota HOM05D004174 ORTHO05D004624 1.2e-156 557.0 388 71.9
Cfa003346 Carpinus fangiana HOM05D004174 ORTHO05D004624 4.4e-156 555.1 393 69.7
Cc06_g08790 Coffea canephora HOM05D004174 ORTHO05D004624 2.2e-155 552.7 397 69.0
TWI34G0924 Tripterygium wilfordii HOM05D004174 ORTHO05D004624 6.4e-155 551.2 383 70.0
Hma1.2p1_0665F.1_g199150 Hydrangea macrophylla HOM05D004174 ORTHO05D004624 1.1e-154 550.4 389 69.4
CiPaw.03G241700 Carya illinoinensis HOM05D004174 ORTHO05D004624 1.4e-154 550.1 397 68.0
COL.COLO4_05761 Corchorus olitorius HOM05D004174 ORTHO05D004624 1.4e-154 550.1 399 68.9
Haze_25614 Corylus avellana HOM05D004174 ORTHO05D004624 1.4e-154 550.1 394 69.5
QL02p087765 Quercus lobata HOM05D004174 ORTHO05D004624 1.4e-154 550.1 398 67.6
FAN19G0954 Fragaria x ananassa HOM05D004174 ORTHO05D004624 2.4e-154 549.3 396 67.2
Actinidia26403 Actinidia chinensis HOM05D004174 ORTHO05D004624 4.2e-154 548.5 393 68.4
Peaxi162Scf02490g00007 Petunia axillaris HOM05D004174 ORTHO05D004624 4.2e-154 548.5 387 69.3
FvH4_1g03600 Fragaria vesca HOM05D004174 ORTHO05D004624 5.4e-154 548.1 396 66.9
RcHm_v2.0_Chr2g0089131 Rosa chinensis HOM05D004174 ORTHO05D004624 5.4e-154 548.1 384 69.5
Actinidia07434 Actinidia chinensis HOM05D004174 ORTHO05D004624 7.1e-154 547.7 393 67.9
FAN28G1355 Fragaria x ananassa HOM05D004174 ORTHO05D004624 2.1e-153 546.2 396 66.2
FAN23G0992 Fragaria x ananassa HOM05D004174 ORTHO05D004624 3.5e-153 545.4 396 66.4
Ciclev10008313m.g Citrus clementina HOM05D004174 ORTHO05D004624 1.0e-152 543.9 404 66.3
Atru.chr7.1197 Acer truncatum HOM05D004174 ORTHO05D004624 1.3e-152 543.5 386 69.2
MSTRG.19607 Avicennia marina HOM05D004174 ORTHO05D004624 1.3e-152 543.5 389 68.9
Oeu058056.1 Olea europaea HOM05D004174 ORTHO05D004624 1.7e-152 543.1 388 68.6
Gorai.013G233600 Gossypium raimondii HOM05D004174 ORTHO05D004624 3.0e-152 542.3 398 67.3
Gohir.D13G204700 Gossypium hirsutum HOM05D004174 ORTHO05D004624 3.9e-152 542.0 398 67.3
MD00G1107300 Malus domestica HOM05D004174 ORTHO05D004624 1.1e-151 540.4 384 70.1
MBI04_g24208_MAGBIO Magnolia biondii HOM05D004174 ORTHO05D004624 2.5e-151 539.3 396 67.9
Gohir.A13G199200 Gossypium hirsutum HOM05D004174 ORTHO05D004624 3.3e-151 538.9 393 67.4
TAR383G0558 Trochodendron aralioides HOM05D004174 ORTHO05D004624 3.3e-151 538.9 392 68.4
Thecc.09G123000 Theobroma cacao HOM05D004174 ORTHO05D004624 5.6e-151 538.1 388 68.0
HanXRQChr12g0368841 Helianthus annuus HOM05D004174 ORTHO05D004624 1.3e-150 537.0 388 68.6
Eucgr.C04181 Eucalyptus grandis HOM05D004174 ORTHO05D004624 4.8e-150 535.0 394 68.3
Duzib150G0384 Durio zibethinus HOM05D004174 ORTHO05D004624 1.4e-149 533.5 387 67.2
THA.LOC104811038 Tarenaya hassleriana HOM05D004174 ORTHO05D004624 1.4e-149 533.5 386 65.0
Prupe.7G239600 Prunus persica HOM05D004174 ORTHO05D004624 1.8e-149 533.1 384 68.5
THA.LOC104799651 Tarenaya hassleriana HOM05D004174 ORTHO05D004624 2.4e-149 532.7 400 65.0
Nn8g39387 Nelumbo nucifera HOM05D004174 ORTHO05D004624 5.3e-149 531.6 387 67.7
EL10Ac8g18616 Beta vulgaris HOM05D004174 ORTHO05D004624 9.0e-149 530.8 380 69.2
Manes.14G130500 Manihot esculenta HOM05D004174 ORTHO05D004624 1.2e-148 530.4 392 66.8
Aa31LG8G2170 Aethionema arabicum HOM05D004174 ORTHO05D004624 5.8e-148 528.1 388 66.0
Migut.J01169 Erythranthe guttata HOM05D004174 ORTHO05D004624 5.8e-148 528.1 383 67.6
MD02G1035600 Malus domestica HOM05D004174 ORTHO05D004624 5.8e-148 528.1 395 66.8
Duzib187G0531 Durio zibethinus HOM05D004174 ORTHO05D004624 7.6e-148 527.7 396 66.7
A02p06020 Brassica napus HOM05D004174 ORTHO05D004624 9.9e-148 527.3 388 66.2
BraA02t05553Z Brassica rapa HOM05D004174 ORTHO05D004624 9.9e-148 527.3 388 66.2
Aqoxy7G02096 Aquilegia oxysepala HOM05D004174 ORTHO05D004624 1.3e-147 526.9 391 66.5
FAN26G3217 Fragaria x ananassa HOM05D004174 ORTHO05D004624 1.7e-147 526.6 396 65.4
Ca_03159_v3 Cicer arietinum L. HOM05D004174 ORTHO05D004624 2.9e-147 525.8 380 67.6
Sc18g0000710 Simmondsia chinensis HOM05D004174 ORTHO05D004624 1.4e-146 523.5 382 68.1
BcaC03g13730 Brassica carinata HOM05D004174 ORTHO05D004624 1.9e-146 523.1 390 65.9
HanXRQChr06g0180241 Helianthus annuus HOM05D004174 ORTHO05D004624 1.9e-146 523.1 395 65.6
TWI32G1270 Tripterygium wilfordii HOM05D004174 ORTHO05D004624 1.9e-146 523.1 383 66.8
AL6G31620 Arabidopsis lyrata HOM05D004174 ORTHO05D004624 2.4e-146 522.7 387 65.1
Carub.0006s1845 Capsella rubella HOM05D004174 ORTHO05D004624 2.4e-146 522.7 390 64.6
BcaB05g22875 Brassica carinata HOM05D004174 ORTHO05D004624 4.2e-146 521.9 388 65.7
Potri.018G070400 Populus trichocarpa HOM05D004174 ORTHO05D004624 5.4e-146 521.5 391 65.5
Lsat_1_v5_gn_8_58900 Lactuca sativa HOM05D004174 ORTHO05D004624 7.1e-146 521.2 393 65.1
AT5G20070 Arabidopsis thaliana HOM05D004174 ORTHO05D004624 9.3e-146 520.8 387 64.6
Potri.006G154200 Populus trichocarpa HOM05D004174 ORTHO05D004624 9.3e-146 520.8 393 65.9
CANSAT11G0280 Cannabis sativa HOM05D004174 ORTHO05D004624 1.2e-145 520.4 393 65.6
Manes.06G050000 Manihot esculenta HOM05D004174 ORTHO05D004624 3.5e-145 518.8 392 66.3
Nitab4.5_0006698g0010 Nicotiana tabacum HOM05D004174 ORTHO05D004624 6.0e-145 518.1 386 68.1
SGA_v2.0_scaffold229G43324 Striga asiatica HOM05D004174 ORTHO05D004624 1.0e-144 517.3 381 65.6
Thhalv10013566m.g Eutrema salsugineum HOM05D004174 ORTHO05D004624 1.3e-144 516.9 393 63.9
SalBow3G2402 Salvia bowleyana HOM05D004174 ORTHO05D004624 1.3e-144 516.9 388 67.0
Hund09144 Selenicereus undatus HOM05D004174 ORTHO05D004624 1.3e-144 516.9 384 65.6
Sed0019119 Sechium edule HOM05D004174 ORTHO05D004624 1.8e-144 516.5 389 66.8
Lsat_1_v5_gn_7_42401 Lactuca sativa HOM05D004174 ORTHO05D004624 2.3e-144 516.2 387 65.6
CARHR192760 Cardamine hirsuta HOM05D004174 ORTHO05D004624 3.9e-144 515.4 392 63.3
Sp6g24340 Schrenkiella parvula HOM05D004174 ORTHO05D004624 3.9e-144 515.4 390 63.8
PGSC0003DMG400024321 Solanum tuberosum HOM05D004174 ORTHO05D004624 5.1e-144 515.0 381 68.2
CSS0035220 Camellia sinensis var. sinensis HOM05D004174 ORTHO05D004624 6.7e-144 514.6 361 70.6
Psat1g025760 Pisum sativum HOM05D004174 ORTHO05D004624 6.7e-144 514.6 381 66.7
ClCG11G002850 Citrullus lanatus HOM05D004174 ORTHO05D004624 1.1e-143 513.8 388 66.0
Medtr2g054680 Medicago truncatula HOM05D004174 ORTHO05D004624 1.1e-143 513.8 380 66.3
BNapus_Darmor_BZH_scaffold_38p01820 Brassica napus HOM05D004174 ORTHO05D004624 1.5e-143 513.5 388 65.2
PGR102G0881 Punica granatum HOM05D004174 ORTHO05D004624 1.5e-143 513.5 396 64.1
Sopen06g031500 Solanum pennellii HOM05D004174 ORTHO05D004624 1.9e-143 513.1 381 67.7
Nitab4.5_0000106g0230 Nicotiana tabacum HOM05D004174 ORTHO05D004624 2.5e-143 512.7 388 67.0
COL.COLO4_17917 Corchorus olitorius HOM05D004174 ORTHO05D004624 4.3e-143 511.9 400 65.0
HanXRQChr03g0062501 Helianthus annuus HOM05D004174 ORTHO05D004624 4.3e-143 511.9 390 65.9
MELO3C004525.2 Cucumis melo HOM05D004174 ORTHO05D004624 5.6e-143 511.5 388 65.5
Lalb_Chr23g0275331 Lupinus albus HOM05D004174 ORTHO05D004624 7.4e-143 511.1 392 64.8
BcaB01g04811 Brassica carinata HOM05D004174 ORTHO05D004624 1.6e-142 510.0 393 63.1
CsaV3_2G002690 Cucumis sativus L. HOM05D004174 ORTHO05D004624 1.6e-142 510.0 388 64.9
Solyc06g075080.4 Solanum lycopersicum HOM05D004174 ORTHO05D004624 2.8e-142 509.2 381 67.5
CAN.G1966.1 Capsicum annuum HOM05D004174 ORTHO05D004624 4.8e-142 508.4 383 67.1
Sabra18G0061500 Salix brachista HOM05D004174 ORTHO05D004624 4.8e-142 508.4 386 65.5
TPR.G31095 Trifolium pratense HOM05D004174 ORTHO05D004624 3.1e-141 505.8 395 64.6
A03p09800 Brassica napus HOM05D004174 ORTHO05D004624 4.0e-141 505.4 397 62.7
BraA03t10295Z Brassica rapa HOM05D004174 ORTHO05D004624 4.0e-141 505.4 397 62.7
Gohir.D08G260000 Gossypium hirsutum HOM05D004174 ORTHO05D004624 1.2e-140 503.8 389 62.7
BolC3t13612H Brassica oleracea HOM05D004174 ORTHO05D004624 1.5e-140 503.4 391 62.7
C03p11380 Brassica napus HOM05D004174 ORTHO05D004624 3.4e-140 502.3 391 62.7
Phvul.009G197200 Phaseolus vulgaris HOM05D004174 ORTHO05D004624 2.9e-139 499.2 394 63.5
Gorai.004G277900 Gossypium raimondii HOM05D004174 ORTHO05D004624 6.4e-139 498.0 396 62.1
PSO170G6838 Papaver somniferum HOM05D004174 ORTHO05D004624 1.4e-138 496.9 397 64.2
VMungo1309G2067 Vigna mungo HOM05D004174 ORTHO05D004624 1.2e-137 493.8 391 63.2
Rhsim03G0246500 Rhododendron simsii HOM05D004174 ORTHO05D004624 1.6e-137 493.4 331 71.9
PSO455G0049 Papaver somniferum HOM05D004174 ORTHO05D004624 4.6e-137 491.9 394 64.2
CDE02G3646 Ceratophyllum demersum HOM05D004174 ORTHO05D004624 2.3e-136 489.6 387 64.1
ATR1156G006 Amborella trichopoda HOM05D004174 ORTHO05D004624 1.9e-135 486.5 408 62.3
Glyma.06G216700 Glycine max HOM05D004174 ORTHO05D004624 1.9e-135 486.5 396 63.4
arahy.Tifrunner.gnm1.ann1.SBVG8E Arachis hypogaea HOM05D004174 ORTHO05D004624 4.0e-133 478.8 400 60.5
Lj1g0010752 Lotus japonicus HOM05D004174 ORTHO05D004624 4.0e-133 478.8 400 62.0
Lalb_Chr07g0178801 Lupinus albus HOM05D004174 ORTHO05D004624 1.5e-132 476.9 381 61.2
TPR.G10694 Trifolium pratense HOM05D004174 ORTHO05D004624 5.8e-132 474.9 384 61.5
Lalb_Chr08g0234871 Lupinus albus HOM05D004174 ORTHO05D004624 7.6e-132 474.6 379 62.0
ECA240G3275 Erigeron canadensis HOM05D004174 ORTHO05D004624 1.0e-131 474.2 327 69.7
arahy.Tifrunner.gnm1.ann1.E6UBTJ Arachis hypogaea HOM05D004174 ORTHO05D004624 1.7e-131 473.4 412 59.2
Medtr4g113990 Medicago truncatula HOM05D004174 ORTHO05D004624 2.5e-130 469.5 384 60.9
MELO3C026643.2 Cucumis melo HOM05D004174 ORTHO05D004624 7.1e-130 468.0 385 60.8
MD15G1175700 Malus domestica HOM05D004174 ORTHO05D004624 2.1e-129 466.5 435 58.6
GSVIVG01015501001 Vitis vinifera HOM05D004174 ORTHO05D004624 7.9e-129 464.5 299 74.2
HPP92_000685 Vanilla planifolia HOM05D004174 ORTHO05D004624 1.3e-128 463.8 386 61.9
HPP92_000661 Vanilla planifolia HOM05D004174 ORTHO05D004624 1.8e-128 463.4 386 61.9
Glyma.17G116600 Glycine max HOM05D004174 ORTHO05D004624 2.3e-128 463.0 385 59.7
Psat4g040360 Pisum sativum HOM05D004174 ORTHO05D004624 3.0e-128 462.6 384 60.4
Dinv41532 Davidia involucrata HOM05D004174 ORTHO05D004624 2.2e-126 456.4 307 71.3
Sed0008859 Sechium edule HOM05D004174 ORTHO05D004624 2.2e-126 456.4 384 58.6
Zm00001eb377430 Zea mays HOM05D004174 ORTHO05D004624 6.9e-125 451.4 394 59.4
Phvul.003G162700 Phaseolus vulgaris HOM05D004174 ORTHO05D004624 2.6e-124 449.5 385 59.0
VMungo1215G2625 Vigna mungo HOM05D004174 ORTHO05D004624 3.4e-124 449.1 384 59.1
AUR62033476 Chenopodium quinoa HOM05D004174 ORTHO05D004624 5.0e-123 445.3 381 60.6
Os06g0141166 Oryza sativa ssp. japonica HOM05D004174 ORTHO05D004624 4.6e-121 438.7 406 57.9
SEGI_17043 Sequoiadendron giganteum HOM05D004174 ORTHO05D004624 1.3e-118 430.6 391 56.5
FAN26G0665 Fragaria x ananassa HOM05D004174 ORTHO05D004624 7.2e-114 414.8 252 77.4
ClCG06G010920 Citrullus lanatus HOM05D004174 ORTHO05D004624 4.1e-109 399.1 385 51.9
Ah.02g124290 Amaranthus hybridus HOM05D004174 ORTHO05D004624 2.9e-99 366.3 228 75.0
Ah.14g080300 Amaranthus hybridus HOM05D004174 ORTHO05D004624 2.9e-99 366.3 225 76.0
Lj7A632G45 Lonicera japonica HOM05D004174 ORTHO05D004624 4.2e-98 362.5 280 64.6
Gohir.A08G239300 Gossypium hirsutum HOM05D004174 ORTHO05D004624 1.0e-96 357.8 282 61.7
AagrBONN_evm.TU.Sc2ySwM_368.699 Anthoceros agrestis HOM05D004174 ORTHO05D004624 3.5e-92 342.8 411 46.5
SEGI_09002 Sequoiadendron giganteum HOM05D004174 ORTHO05D004624 2.2e-91 340.1 270 61.9
Pp3c3_2090 Physcomitrium patens HOM05D004174 ORTHO05D004624 1.6e-89 334.0 391 46.0
Mapoly0103s0044 Marchantia polymorpha HOM05D004174 ORTHO05D004624 1.3e-86 324.3 425 44.2
Lj4g0002160 Lotus japonicus HOM05D004174 ORTHO05D004624 2.7e-84 316.6 280 56.1
SMO169G0291 Selaginella moellendorffii HOM05D004174 ORTHO05D004624 6.5e-83 312.0 253 58.9
Lj4A460T58 Lonicera japonica HOM05D004174 ORTHO05D004624 1.5e-82 310.8 234 66.2
AUR62030487 Chenopodium quinoa HOM05D004174 ORTHO05D004624 2.6e-71 273.5 172 77.9
AUR62011109 Chenopodium quinoa HOM05D004174 ORTHO05D004624 6.6e-67 258.8 173 75.1
SEGI_03330 Sequoiadendron giganteum HOM05D004174 ORTHO05D004624 1.4e-61 241.1 246 50.4
Glyma.05G008302 Glycine max HOM05D004174 ORTHO05D004624 1.4e-56 224.6 153 69.3
BolC2t07007H Brassica oleracea HOM05D004174 ORTHO05D004624 1.8e-48 197.6 202 51.0
Cre09.g396900 Chlamydomonas reinhardtii HOM05D004174 ORTHO05D004624 5.6e-42 176.0 239 40.6
AUR62015314 Chenopodium quinoa HOM05D004174 ORTHO05D004624 7.3e-42 175.6 147 59.9
Cpa.g.sc648.3 Carica papaya HOM05D004174 ORTHO05D004624 6.2e-41 172.6 181 51.4
AUR62011090 Chenopodium quinoa HOM05D003948 ORTHO05D004610 9.3e-37 158.7 164 50.6
Cc11_g15180 Coffea canephora HOM05D004174 ORTHO05D004624 1.6e-36 157.9 106 72.6
Ah.14g080310 Amaranthus hybridus HOM05D004174 ORTHO05D004624 2.3e-35 154.1 160 51.9
SEGI_13131 Sequoiadendron giganteum HOM05D004174 ORTHO05D004624 4.3e-34 149.8 379 28.8
Haze_27339 Corylus avellana HOM05D004174 ORTHO05D004624 2.4e-32 144.1 166 48.2
MD02G1035400 Malus domestica HOM05D004174 ORTHO05D004624 4.5e-31 139.8 83 75.9
Cfa023976 Carpinus fangiana HOM05D003934 ORTHO05D005108 3.8e-30 136.7 245 32.7
Pp3c14_12120 Physcomitrium patens HOM05D004174 ORTHO05D004624 8.7e-27 125.6 237 35.4
Sabra06G0122300 Salix brachista HOM05D004174 ORTHO05D004624 1.6e-25 121.3 233 35.6
Mapoly0019s0154 Marchantia polymorpha HOM05D004174 ORTHO05D004624 1.4e-24 118.2 302 33.1
MCO10G159 Micromonas commoda HOM05D004174 ORTHO05D004624 5.3e-24 116.3 265 32.1
Lj4C460T3 Lonicera japonica HOM05D004174 ORTHO05D004624 4.9e-22 109.8 77 67.5
Ah.12g053390 Amaranthus hybridus HOM05D004174 ORTHO05D004624 1.9e-21 107.8 64 73.4
Ah.12g055680 Amaranthus hybridus HOM05D004174 ORTHO05D004624 4.2e-21 106.7 152 41.4
Ah.05g171270 Amaranthus hybridus HOM05D004174 ORTHO05D004624 9.3e-21 105.5 64 71.9
CBR_g46446 Chara braunii HOM05D004174 ORTHO05D004624 7.9e-20 102.4 249 29.7
PRCOL_00006603 Prasinoderma coloniale HOM05D004174 ORTHO05D004624 3.1e-16 90.5 184 31.0
VMungo0647G2130 Vigna mungo HOM05D004174 ORTHO05D004624 1.1e-13 82.0 146 35.6
Cre13.g582476 Chlamydomonas reinhardtii HOM05D004174 ORTHO05D004624 5.5e-13 79.7 94 47.9
Psat3g000160 Pisum sativum HOM05D004174 ORTHO05D004624 3.3e-10 70.5 99 36.4
SMO141G0190 Selaginella moellendorffii HOM05D004174 ORTHO05D004624 2.2e-09 67.8 119 38.7
VMungo1215G0447 Vigna mungo HOM05D006361 ORTHO05D007824 1.4e-08 65.1 74 45.9
Ah.12g053410 Amaranthus hybridus HOM05D004174 ORTHO05D004624 1.0e-06 58.9 38 65.8


User provided reference genes

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