Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_009187 Daucus carota HOM05D005825 ORTHO05D006483 1.5e-181 639.4 321 100.0
Dinv36528 Davidia involucrata HOM05D005825 ORTHO05D006483 1.2e-140 503.4 323 79.3
vmacro20556 Vaccinium macrocarpon HOM05D005825 ORTHO05D006483 2.0e-138 496.1 319 77.4
Peaxi162Scf00157g01524 Petunia axillaris HOM05D005825 ORTHO05D006483 9.9e-138 493.8 321 77.9
Lalb_Chr13g0301881 Lupinus albus HOM05D005825 ORTHO05D006483 2.9e-137 492.3 323 76.8
Lsat_1_v5_gn_8_58680 Lactuca sativa HOM05D005825 ORTHO05D006483 4.9e-137 491.5 323 76.2
Psat4g040200 Pisum sativum HOM05D005825 ORTHO05D006483 1.2e-135 486.9 324 76.5
Oeu007499.1 Olea europaea HOM05D005825 ORTHO05D006483 1.6e-135 486.5 332 74.7
CSS0017066 Camellia sinensis var. sinensis HOM05D005825 ORTHO05D006483 2.1e-135 486.1 320 75.3
CSS0027185 Camellia sinensis var. sinensis HOM05D005825 ORTHO05D006483 6.0e-135 484.6 320 75.3
Ca_21683_v3 Cicer arietinum L. HOM05D005825 ORTHO05D006483 1.7e-134 483.0 324 75.6
Rhsim01G0070600 Rhododendron simsii HOM05D005825 ORTHO05D006483 6.6e-134 481.1 323 74.3
DCAR_017816 Daucus carota HOM05D005825 ORTHO05D006483 1.9e-133 479.6 359 70.8
Phvul.003G164300 Phaseolus vulgaris HOM05D005825 ORTHO05D006483 7.3e-133 477.6 324 74.1
Actinidia40470 Actinidia chinensis HOM05D005825 ORTHO05D006483 4.8e-132 474.9 320 74.4
Sopen12g004430 Solanum pennellii HOM05D005825 ORTHO05D006483 4.8e-132 474.9 323 74.3
Lalb_Chr12g0197941 Lupinus albus HOM05D005825 ORTHO05D006483 6.2e-132 474.6 322 74.8
Solyc12g009430.2 Solanum lycopersicum HOM05D005825 ORTHO05D006483 6.2e-132 474.6 323 74.3
arahy.Tifrunner.gnm1.ann1.9UEQ51 Arachis hypogaea HOM05D005825 ORTHO05D006483 2.4e-131 472.6 323 73.1
SalBow3G4290 Salvia bowleyana HOM05D005825 ORTHO05D006483 3.1e-131 472.2 322 74.5
arahy.Tifrunner.gnm1.ann1.1NB5KJ Arachis hypogaea HOM05D005825 ORTHO05D006483 4.0e-131 471.9 321 73.5
Glyma.13G167400 Glycine max HOM05D005825 ORTHO05D006483 6.9e-131 471.1 323 73.7
Hma1.2p1_0018F.1_g012420 Hydrangea macrophylla HOM05D005825 ORTHO05D006483 9.0e-131 470.7 321 74.5
Medtr4g114160 Medicago truncatula HOM05D005825 ORTHO05D006483 9.0e-131 470.7 323 74.3
Hma1.2p1_2368F.1_g320700 Hydrangea macrophylla HOM05D005825 ORTHO05D006483 2.0e-130 469.5 321 74.1
Lj2C942T8 Lonicera japonica HOM05D005825 ORTHO05D006483 2.0e-130 469.5 349 69.9
CAN.G1591.11 Capsicum annuum HOM05D005825 ORTHO05D006483 5.8e-130 468.0 321 72.6
Rhsim01G0071200 Rhododendron simsii HOM05D005825 ORTHO05D006483 5.8e-130 468.0 326 71.8
CANSAT11G1244 Cannabis sativa HOM05D005825 ORTHO05D006483 7.6e-130 467.6 326 73.0
PGR142G1018 Punica granatum HOM05D005825 ORTHO05D006483 9.9e-130 467.2 323 71.8
SGA_v2.0_scaffold299G47720 Striga asiatica HOM05D005825 ORTHO05D006483 1.3e-129 466.8 323 72.4
Nitab4.5_0014105g0010 Nicotiana tabacum HOM05D005825 ORTHO05D006483 1.7e-129 466.5 316 75.3
Nitab4.5_0002658g0050 Nicotiana tabacum HOM05D005825 ORTHO05D006483 2.9e-129 465.7 316 74.4
Hund09127 Selenicereus undatus HOM05D005825 ORTHO05D006483 2.9e-129 465.7 320 74.4
Migut.B01717 Erythranthe guttata HOM05D005825 ORTHO05D006483 6.4e-129 464.5 327 72.5
PGSC0003DMG400002918 Solanum tuberosum HOM05D005825 ORTHO05D006483 1.9e-128 463.0 317 74.1
Atru.chr7.1162 Acer truncatum HOM05D005825 ORTHO05D006483 3.2e-128 462.2 324 72.5
arahy.Tifrunner.gnm1.ann1.85XGXJ Arachis hypogaea HOM05D005825 ORTHO05D006483 5.4e-128 461.5 331 71.3
VMungo1215G3451 Vigna mungo HOM05D005825 ORTHO05D006483 5.4e-128 461.5 322 71.1
MSTRG.19597 Avicennia marina HOM05D005825 ORTHO05D006483 7.1e-128 461.1 325 71.4
Lj4g0013357 Lotus japonicus HOM05D005825 ORTHO05D006483 3.5e-127 458.8 324 72.8
Sed0008025 Sechium edule HOM05D005825 ORTHO05D006483 4.6e-127 458.4 322 71.4
Cfa003372 Carpinus fangiana HOM05D005825 ORTHO05D006483 6.0e-127 458.0 322 73.0
Ciclev10008932m.g Citrus clementina HOM05D005825 ORTHO05D006483 7.9e-127 457.6 320 71.9
arahy.Tifrunner.gnm1.ann1.R6UVTB Arachis hypogaea HOM05D005825 ORTHO05D006483 1.3e-126 456.8 331 70.7
Cpa.g.sc75.29 Carica papaya HOM05D005825 ORTHO05D006483 6.7e-126 454.5 321 71.3
Eucgr.C01173 Eucalyptus grandis HOM05D005825 ORTHO05D006483 1.1e-125 453.8 326 69.6
Sc08g0006620 Simmondsia chinensis HOM05D005825 ORTHO05D006483 1.1e-125 453.8 327 70.3
TAR625G0074 Trochodendron aralioides HOM05D005825 ORTHO05D006483 1.1e-125 453.8 322 71.4
Nn2g12789 Nelumbo nucifera HOM05D005825 ORTHO05D006483 1.5e-125 453.4 326 70.2
Gorai.010G064100 Gossypium raimondii HOM05D005825 ORTHO05D006483 3.3e-125 452.2 328 71.3
MBI16_g24711_MAGBIO Magnolia biondii HOM05D005825 ORTHO05D006483 5.6e-125 451.4 322 69.9
MELO3C004508.2 Cucumis melo HOM05D005825 ORTHO05D006483 7.4e-125 451.1 320 70.9
Lj2A929T15 Lonicera japonica HOM05D005825 ORTHO05D006483 7.4e-125 451.1 351 67.8
HanXRQChr17g0537731 Helianthus annuus HOM05D005825 ORTHO05D006483 1.3e-124 450.3 318 71.7
Gohir.D06G054601 Gossypium hirsutum HOM05D005825 ORTHO05D006483 1.6e-124 449.9 328 71.0
EL10Ac8g18654 Beta vulgaris HOM05D005825 ORTHO05D006483 2.1e-124 449.5 323 70.0
Thecc.09G126400 Theobroma cacao HOM05D005825 ORTHO05D006483 6.2e-124 448.0 326 70.6
TWI34G0282 Tripterygium wilfordii HOM05D005825 ORTHO05D006483 6.2e-124 448.0 327 70.3
FAN23G1198 Fragaria x ananassa HOM05D005825 ORTHO05D006483 8.1e-124 447.6 323 70.9
CsaV3_2G002850 Cucumis sativus L. HOM05D005825 ORTHO05D006483 1.4e-123 446.8 320 70.9
FAN26G2420 Fragaria x ananassa HOM05D005825 ORTHO05D006483 2.4e-123 446.0 323 70.6
FAN19G0135 Fragaria x ananassa HOM05D005825 ORTHO05D006483 3.1e-123 445.7 323 70.6
FvH4_1g03280 Fragaria vesca HOM05D005825 ORTHO05D006483 5.3e-123 444.9 323 70.3
CiPaw.03G244100 Carya illinoinensis HOM05D005825 ORTHO05D006483 1.2e-122 443.7 323 69.0
Gohir.A06G056101 Gossypium hirsutum HOM05D005825 ORTHO05D006483 1.2e-122 443.7 327 70.6
ClCG11G003030 Citrullus lanatus HOM05D005825 ORTHO05D006483 2.0e-122 443.0 320 70.6
Aqoxy5G01398 Aquilegia oxysepala HOM05D005825 ORTHO05D006483 3.4e-122 442.2 322 70.8
Duzib168G1077 Durio zibethinus HOM05D005825 ORTHO05D006483 4.5e-122 441.8 328 68.6
FAN28G2006 Fragaria x ananassa HOM05D005825 ORTHO05D006483 5.8e-122 441.4 324 70.7
PSO675G5818 Papaver somniferum HOM05D005825 ORTHO05D006483 5.8e-122 441.4 323 68.1
Sabra02G0094300 Salix brachista HOM05D005825 ORTHO05D006483 5.8e-122 441.4 322 71.1
MD02G1032800 Malus domestica HOM05D005825 ORTHO05D006483 9.9e-122 440.7 324 69.4
Manes.06G058801 Manihot esculenta HOM05D005825 ORTHO05D006483 1.7e-121 439.9 327 70.0
Prupe.7G242700 Prunus persica HOM05D005825 ORTHO05D006483 6.4e-121 438.0 324 68.5
AL4G19680 Arabidopsis lyrata HOM05D005825 ORTHO05D006483 8.4e-121 437.6 324 69.1
AT2G26680 Arabidopsis thaliana HOM05D005825 ORTHO05D006483 8.4e-121 437.6 324 69.4
PSO782G3266 Papaver somniferum HOM05D005825 ORTHO05D006483 1.1e-120 437.2 323 68.4
Aa31LG5G9110 Aethionema arabicum HOM05D003776 ORTHO05D004459 1.4e-120 436.8 320 68.4
HanXRQChr17g0537711 Helianthus annuus HOM05D005825 ORTHO05D006483 1.4e-120 436.8 318 69.2
RcHm_v2.0_Chr2g0088431 Rosa chinensis HOM05D005825 ORTHO05D006483 1.9e-120 436.4 329 69.6
Sp4g09150 Schrenkiella parvula HOM05D005825 ORTHO05D006483 1.9e-120 436.4 319 68.7
Ah.09g226210 Amaranthus hybridus HOM05D005825 ORTHO05D006483 4.2e-120 435.3 323 67.8
THA.LOC104815280 Tarenaya hassleriana HOM05D005825 ORTHO05D006483 5.5e-120 434.9 325 68.3
Carub.0004s0696 Capsella rubella HOM05D005825 ORTHO05D006483 9.3e-120 434.1 322 68.6
AUR62013360 Chenopodium quinoa HOM05D005825 ORTHO05D006483 1.6e-119 433.3 279 75.6
Potri.014G017900 Populus trichocarpa HOM05D005825 ORTHO05D006483 2.7e-119 432.6 320 69.7
Sabra14G0011800 Salix brachista HOM05D005825 ORTHO05D006483 2.3e-118 429.5 321 70.1
A04p21320 Brassica napus HOM05D005825 ORTHO05D006483 5.1e-118 428.3 330 67.3
BraA04t17698Z Brassica rapa HOM05D005825 ORTHO05D006483 5.1e-118 428.3 330 67.3
unitig_748.g8100 Utricularia gibba HOM05D005825 ORTHO05D006483 1.5e-117 426.8 323 67.8
C04p57230 Brassica napus HOM05D005825 ORTHO05D006483 7.4e-117 424.5 335 66.9
Thhalv10002044m.g Eutrema salsugineum HOM05D005825 ORTHO05D006483 1.3e-116 423.7 318 67.3
BcaB06g28186 Brassica carinata HOM05D005825 ORTHO05D006483 1.6e-116 423.3 326 66.0
CDE04G1080 Ceratophyllum demersum HOM05D005825 ORTHO05D006483 1.6e-116 423.3 323 67.8
BolC4t27250H Brassica oleracea HOM05D005825 ORTHO05D006483 1.4e-115 420.2 335 66.3
BcaC02g08209 Brassica carinata HOM05D005825 ORTHO05D006483 1.2e-114 417.2 336 65.8
Thhalv10023596m.g Eutrema salsugineum HOM05D005825 ORTHO05D006483 1.2e-114 417.2 326 67.2
HPP92_017605 Vanilla planifolia HOM05D005825 ORTHO05D006483 2.5e-112 409.5 326 65.0
QL10p023454 Quercus lobata HOM05D005825 ORTHO05D006483 5.5e-112 408.3 497 48.5
HanXRQChr06g0180341 Helianthus annuus HOM05D005825 ORTHO05D006483 1.2e-111 407.1 285 70.9
Os03g0566600 Oryza sativa ssp. japonica HOM05D005825 ORTHO05D006483 3.5e-111 405.6 265 74.3
Zm00001eb043030 Zea mays HOM05D005825 ORTHO05D006483 2.8e-108 396.0 269 71.4
Haze_25579 Corylus avellana HOM05D005825 ORTHO05D006483 2.4e-107 392.9 324 64.5
ATR0225G021 Amborella trichopoda HOM05D005825 ORTHO05D006483 1.4e-104 383.6 262 72.9
SHI03392 Sapria himalayana HOM05D005825 ORTHO05D006483 3.6e-103 379.0 383 55.4
AUR62011128 Chenopodium quinoa HOM05D005825 ORTHO05D006483 3.1e-99 365.9 322 60.6
ECA246G2031 Erigeron canadensis HOM05D000004 ORTHO05D000002 5.5e-88 328.6 199 80.9
Potri.002G119800 Populus trichocarpa HOM05D005825 ORTHO05D006483 1.5e-85 320.5 190 82.6
TPR.G10697 Trifolium pratense HOM05D005825 ORTHO05D006483 1.3e-84 317.4 185 84.9
AagrBONN_evm.TU.Sc2ySwM_344.1792 Anthoceros agrestis HOM05D005825 ORTHO05D006483 2.6e-82 309.7 279 54.8
Glyma.17G115000 Glycine max HOM05D005825 ORTHO05D006483 3.8e-81 305.8 178 85.4
GSVIVG01015529001 Vitis vinifera HOM05D005825 ORTHO05D006483 6.5e-81 305.1 167 88.0
SMO147G0115 Selaginella moellendorffii HOM05D005825 ORTHO05D006483 5.5e-80 302.0 260 57.3
CiPaw.04G171000 Carya illinoinensis HOM05D005825 ORTHO05D006483 1.0e-78 297.7 178 80.9
Cc06_g08520 Coffea canephora HOM05D005825 ORTHO05D006483 1.5e-77 293.9 170 83.5
CARHR118580 Cardamine hirsuta HOM05D005825 ORTHO05D006483 1.6e-63 247.3 205 62.4
Ca_13270_v3 Cicer arietinum L. HOM05D005825 ORTHO05D006483 1.8e-59 233.8 184 65.8
Ca_14592_v3 Cicer arietinum L. HOM05D005825 ORTHO05D006483 1.9e-56 223.8 216 58.8
Actinidia21988 Actinidia chinensis HOM05D005825 ORTHO05D006483 3.6e-55 219.5 151 75.5
Eucgr.G00617 Eucalyptus grandis HOM05D005825 ORTHO05D006483 4.6e-50 202.6 118 83.9
Eucgr.B02426 Eucalyptus grandis HOM05D005825 ORTHO05D006483 9.5e-48 194.9 118 81.4
VMungo0647G0470 Vigna mungo HOM05D005825 ORTHO05D006483 2.1e-47 193.7 141 64.5
Eucgr.C03225 Eucalyptus grandis HOM05D005825 ORTHO05D006483 4.4e-45 186.0 112 80.4
CARHR118590 Cardamine hirsuta HOM05D005825 ORTHO05D006483 1.3e-44 184.5 119 73.9
Eucgr.E01840 Eucalyptus grandis HOM05D005825 ORTHO05D006483 7.3e-40 168.7 118 74.6
Eucgr.B02447 Eucalyptus grandis HOM05D005825 ORTHO05D006483 1.4e-35 154.5 95 82.1
TAR381G0761 Trochodendron aralioides HOM05D005825 ORTHO05D006483 7.1e-35 152.1 151 53.6
CAN.G204.2 Capsicum annuum HOM05D005825 ORTHO05D006483 4.0e-22 109.8 73 72.6
SalBow6G2945 Salvia bowleyana HOM05D000060 ORTHO05D000082 1.0e-17 95.1 119 51.3
Zm00001eb219900 Zea mays HOM05D005825 ORTHO05D006483 1.4e-14 84.7 161 35.4
VMungo0464G1687 Vigna mungo HOM05D005825 ORTHO05D006483 6.4e-12 75.9 55 65.5
Cre12.g488550 Chlamydomonas reinhardtii HOM05D024924 ORTHO05D006483 6.0e-10 69.3 148 33.8
MCO17G084 Micromonas commoda HOM05D051517 ORTHO05D006483 1.3e-09 68.2 174 28.7
Cre02.g103000 Chlamydomonas reinhardtii HOM05D024924 ORTHO05D006483 1.5e-08 64.7 145 33.1
vmacro22117 Vaccinium macrocarpon HOM05D003776 ORTHO05D004459 8.1e-07 58.9 77 49.4


User provided reference genes

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