Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_009185 Daucus carota HOM05D054457 ORTHO05D000064 5.7e-155 550.8 268 100.0
DCAR_020778 Daucus carota HOM05D000123 ORTHO05D000064 7.7e-35 151.8 229 45.0
Dinv21258 Davidia involucrata HOM05D000123 ORTHO05D000064 4.5e-27 125.9 232 37.1
CSS0012317 Camellia sinensis var. sinensis HOM05D000123 ORTHO05D000064 3.8e-26 122.9 229 35.4
CAN.G824.29 Capsicum annuum HOM05D000123 ORTHO05D000064 1.3e-21 107.8 212 36.8
Cc06_g05260 Coffea canephora HOM05D000123 ORTHO05D000064 1.3e-21 107.8 211 37.4
vmacro07361 Vaccinium macrocarpon HOM05D000123 ORTHO05D000064 1.7e-21 107.5 200 35.0
Peaxi162Scf00433g00411 Petunia axillaris HOM05D000123 ORTHO05D000064 2.8e-21 106.7 231 32.0
Nitab4.5_0006360g0010 Nicotiana tabacum HOM05D000123 ORTHO05D000064 8.3e-21 105.1 218 35.3
Haze_19537 Corylus avellana HOM05D000123 ORTHO05D000064 1.1e-20 104.8 212 34.4
TWI74G1412 Tripterygium wilfordii HOM05D000123 ORTHO05D000064 1.8e-20 104.0 217 33.6
TAR633G0777 Trochodendron aralioides HOM05D000123 ORTHO05D000064 1.8e-20 104.0 223 32.3
QL07p040557 Quercus lobata HOM05D000123 ORTHO05D000064 4.1e-20 102.8 238 34.0
Duzib093G0099 Durio zibethinus HOM05D000123 ORTHO05D000064 7.0e-20 102.1 231 32.0
Nitab4.5_0000663g0110 Nicotiana tabacum HOM05D000123 ORTHO05D000064 1.2e-19 101.3 218 33.5
Ciclev10011531m.g Citrus clementina HOM05D000123 ORTHO05D000064 1.6e-19 100.9 234 32.1
Cfa016372 Carpinus fangiana HOM05D000123 ORTHO05D000064 2.7e-19 100.1 229 33.2
DCAR_015901 Daucus carota HOM05D054457 ORTHO05D174870 2.3e-18 97.1 52 84.6
Manes.08G020700 Manihot esculenta HOM05D000123 ORTHO05D000064 6.6e-18 95.5 232 32.3
TWI53G0606 Tripterygium wilfordii HOM05D000123 ORTHO05D000064 8.6e-18 95.1 240 30.8
GSVIVG01033781001 Vitis vinifera HOM05D000123 ORTHO05D000064 8.6e-18 95.1 221 31.2
Potri.006G115700 Populus trichocarpa HOM05D000123 ORTHO05D000064 3.3e-17 93.2 235 32.3
Atru.chr8.1635 Acer truncatum HOM05D000123 ORTHO05D000064 1.2e-16 91.3 233 32.6
Oeu033119.2 Olea europaea HOM05D000123 ORTHO05D000064 3.6e-16 89.7 225 31.1
Rhsim03G0081300 Rhododendron simsii HOM05D000123 ORTHO05D000064 3.6e-16 89.7 224 30.4
Thecc.05G080900 Theobroma cacao HOM05D000123 ORTHO05D000064 4.7e-16 89.4 231 30.3
arahy.Tifrunner.gnm1.ann1.7QKH3M Arachis hypogaea HOM05D000123 ORTHO05D000064 8.0e-16 88.6 227 30.8
arahy.Tifrunner.gnm1.ann1.YFKM11 Arachis hypogaea HOM05D000123 ORTHO05D000064 8.0e-16 88.6 227 30.8
COL.COLO4_29816 Corchorus olitorius HOM05D000123 ORTHO05D000064 2.3e-15 87.0 231 31.2
MD14G1015900 Malus domestica HOM05D000123 ORTHO05D000064 6.8e-15 85.5 229 31.0
Sopen09g003810 Solanum pennellii HOM05D000123 ORTHO05D000064 6.8e-15 85.5 232 30.6
CiPaw.10G005300 Carya illinoinensis HOM05D000123 ORTHO05D000064 8.9e-15 85.1 235 31.5
PGSC0003DMG401002683 Solanum tuberosum HOM05D000123 ORTHO05D000064 1.5e-14 84.3 233 30.5
Solyc09g009100.4 Solanum lycopersicum HOM05D000123 ORTHO05D000064 3.4e-14 83.2 232 31.0
Actinidia11334 Actinidia chinensis HOM05D000123 ORTHO05D000064 4.4e-14 82.8 211 32.2
Lj5g0020966 Lotus japonicus HOM05D000123 ORTHO05D000064 7.5e-14 82.0 231 32.0
Gohir.A09G135700 Gossypium hirsutum HOM05D000123 ORTHO05D000064 1.3e-13 81.3 233 27.5
Glyma.13G151200 Glycine max HOM05D000123 ORTHO05D000064 1.8e-12 77.4 233 30.5
Gohir.D09G137600 Gossypium hirsutum HOM05D000123 ORTHO05D000064 1.8e-12 77.4 235 26.4
Gorai.006G158000 Gossypium raimondii HOM05D000123 ORTHO05D000064 1.8e-12 77.4 235 26.4
Nn2g14000 Nelumbo nucifera HOM05D000123 ORTHO05D000064 3.2e-12 76.6 224 29.5
Oeu039829.1 Olea europaea HOM05D000123 ORTHO05D000064 3.2e-12 76.6 223 27.4
Sabra06G0090500 Salix brachista HOM05D000123 ORTHO05D000064 3.2e-12 76.6 235 28.5
VMungo0720G0657 Vigna mungo HOM05D000123 ORTHO05D000064 3.2e-12 76.6 230 28.7
Lalb_Chr02g0155151 Lupinus albus HOM05D000123 ORTHO05D000064 9.2e-12 75.1 217 26.7
Sc20g0006030 Simmondsia chinensis HOM05D000123 ORTHO05D000064 1.0e-10 71.6 233 28.8
Glyma.10G066100 Glycine max HOM05D000123 ORTHO05D000064 5.0e-10 69.3 239 30.5
TPR.G5688 Trifolium pratense HOM05D000123 ORTHO05D000064 4.3e-09 66.2 223 28.3
Medtr1g061170 Medicago truncatula HOM05D000123 ORTHO05D000064 9.5e-09 65.1 222 27.9
MD12G1017900 Malus domestica HOM05D000123 ORTHO05D000064 1.2e-08 64.7 73 42.5
Dinv16789 Davidia involucrata HOM05D000123 ORTHO05D000064 3.6e-08 63.2 124 38.7
Glyma.03G191100 Glycine max HOM05D000123 ORTHO05D000064 8.0e-08 62.0 197 25.9
AUR62041419 Chenopodium quinoa HOM05D000123 ORTHO05D000064 1.0e-07 61.6 230 25.7
ClCG10G019360 Citrullus lanatus HOM05D000123 ORTHO05D000064 1.4e-07 61.2 238 28.2
PSO339G5849 Papaver somniferum HOM05D000123 ORTHO05D000064 1.8e-07 60.8 224 26.3
Aqoxy1G00936 Aquilegia oxysepala HOM05D000123 ORTHO05D000064 2.3e-07 60.5 211 26.5
AUR62033579 Chenopodium quinoa HOM05D000123 ORTHO05D000064 2.3e-07 60.5 230 26.1
Ca_11625_v3 Cicer arietinum L. HOM05D000123 ORTHO05D000064 1.5e-06 57.8 221 25.8
Prupe.7G117200 Prunus persica HOM05D000123 ORTHO05D000064 3.4e-06 56.6 40 67.5
Ah.15g091110 Amaranthus hybridus HOM05D000123 ORTHO05D000064 5.8e-06 55.8 220 26.4
Lj2E129T4 Lonicera japonica HOM05D000123 ORTHO05D000064 5.8e-06 55.8 72 44.4


User provided reference genes

Program Settings