Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_009157 Daucus carota HOM05D005679 ORTHO05D007228 1.1e-59 233.0 110 100.0
Nitab4.5_0001725g0030 Nicotiana tabacum HOM05D005679 ORTHO05D007228 1.4e-27 126.3 91 68.1
Nitab4.5_0002400g0100 Nicotiana tabacum HOM05D005679 ORTHO05D007228 5.4e-27 124.4 91 68.1
CAN.G397.28 Capsicum annuum HOM05D005679 ORTHO05D007228 7.3e-24 114.0 117 53.8
Solyc09g009630.3 Solanum lycopersicum HOM05D005679 ORTHO05D007228 2.8e-23 112.1 117 51.3
Sopen09g004390 Solanum pennellii HOM05D005679 ORTHO05D007228 3.6e-23 111.7 117 52.1
PGSC0003DMG401002654 Solanum tuberosum HOM05D005679 ORTHO05D007228 4.7e-23 111.3 117 52.1
Peaxi162Scf00040g01117 Petunia axillaris HOM05D005679 ORTHO05D007228 6.2e-23 110.9 117 53.0
Aqoxy4G02804 Aquilegia oxysepala HOM05D005679 ORTHO05D007228 1.1e-22 110.2 118 47.5
Lsat_1_v5_gn_1_48041 Lactuca sativa HOM05D005679 ORTHO05D007228 2.4e-22 109.0 117 50.4
Oeu047193.1 Olea europaea HOM05D005679 ORTHO05D007228 6.8e-22 107.5 119 48.7
GSVIVG01033827001 Vitis vinifera HOM05D005679 ORTHO05D007228 8.9e-22 107.1 116 49.1
Hma1.2p1_0536F.1_g174040 Hydrangea macrophylla HOM05D005679 ORTHO05D007228 1.2e-21 106.7 119 50.4
Atru.chr8.1566 Acer truncatum HOM05D005679 ORTHO05D007228 1.5e-21 106.3 118 46.6
Cc06_g05640 Coffea canephora HOM05D005679 ORTHO05D007228 1.5e-21 106.3 118 50.0
COL.COLO4_29768 Corchorus olitorius HOM05D005679 ORTHO05D007228 1.5e-21 106.3 118 49.2
MSTRG.5837 Avicennia marina HOM05D005679 ORTHO05D007228 5.8e-21 104.4 118 48.3
Gohir.A04G063700 Gossypium hirsutum HOM05D005679 ORTHO05D007228 5.8e-21 104.4 116 46.6
HanXRQChr10g0313901 Helianthus annuus HOM05D005679 ORTHO05D007228 7.6e-21 104.0 116 50.9
HanXRQChr10g0313981 Helianthus annuus HOM05D005679 ORTHO05D007228 7.6e-21 104.0 116 50.9
HanXRQChr13g0424691 Helianthus annuus HOM05D005679 ORTHO05D007228 7.6e-21 104.0 116 50.9
Actinidia05440 Actinidia chinensis HOM05D005679 ORTHO05D007228 9.9e-21 103.6 118 48.3
CSS0002811 Camellia sinensis var. sinensis HOM05D005679 ORTHO05D007228 9.9e-21 103.6 118 50.0
Dinv21221 Davidia involucrata HOM05D005679 ORTHO05D007228 1.3e-20 103.2 118 48.3
Medtr1g060300 Medicago truncatula HOM05D005679 ORTHO05D007228 1.3e-20 103.2 117 45.3
Gohir.D04G100800 Gossypium hirsutum HOM05D005679 ORTHO05D007228 1.7e-20 102.8 116 45.7
Ciclev10012247m.g Citrus clementina HOM05D005679 ORTHO05D007228 2.2e-20 102.4 118 45.8
HanXRQChr10g0314031 Helianthus annuus HOM05D005679 ORTHO05D007228 2.2e-20 102.4 116 50.9
Aa31LG5G21440 Aethionema arabicum HOM05D005679 ORTHO05D007228 2.9e-20 102.1 118 48.3
TAR633G0672 Trochodendron aralioides HOM05D005679 ORTHO05D007228 2.9e-20 102.1 118 48.3
Glyma.10G071200 Glycine max HOM05D005679 ORTHO05D007228 3.8e-20 101.7 135 43.0
Eucgr.A01508 Eucalyptus grandis HOM05D005679 ORTHO05D007228 6.4e-20 100.9 129 41.1
Gorai.009G404000 Gossypium raimondii HOM05D005679 ORTHO05D007228 8.4e-20 100.5 116 45.7
PSO339G3946 Papaver somniferum HOM05D005679 ORTHO05D007228 8.4e-20 100.5 115 47.0
TPR.G31118 Trifolium pratense HOM05D005679 ORTHO05D007228 8.4e-20 100.5 116 44.8
HanXRQChr11g0340241 Helianthus annuus HOM05D005679 ORTHO05D007228 1.1e-19 100.1 116 50.9
Psat6g080840 Pisum sativum HOM05D005679 ORTHO05D007228 1.1e-19 100.1 117 44.4
MD14G1020800 Malus domestica HOM05D005679 ORTHO05D007228 1.9e-19 99.4 115 45.2
Rhsim03G0076400 Rhododendron simsii HOM05D005679 ORTHO05D007228 1.9e-19 99.4 113 48.7
CANSAT80G1368 Cannabis sativa HOM05D005679 ORTHO05D007228 4.1e-19 98.2 134 38.1
Phvul.007G229100 Phaseolus vulgaris HOM05D005679 ORTHO05D007228 4.1e-19 98.2 135 40.7
Thecc.05G087100 Theobroma cacao HOM05D005679 ORTHO05D007228 4.1e-19 98.2 118 44.9
Glyma.13G153052 Glycine max HOM05D005679 ORTHO05D007228 5.4e-19 97.8 117 43.6
Migut.J01051 Erythranthe guttata HOM05D005679 ORTHO05D007228 7.1e-19 97.4 118 45.8
CiPaw.09G012600 Carya illinoinensis HOM05D005679 ORTHO05D007228 9.2e-19 97.1 118 44.1
Os05g0357700 Oryza sativa ssp. japonica HOM05D005679 ORTHO05D007228 1.6e-18 96.3 119 47.1
VMungo0720G0655 Vigna mungo HOM05D005679 ORTHO05D007228 1.6e-18 96.3 135 40.0
Duzib093G1300 Durio zibethinus HOM05D005679 ORTHO05D007228 3.5e-18 95.1 118 44.9
SGA_v2.0_scaffold13G06736 Striga asiatica HOM05D005679 ORTHO05D007228 3.5e-18 95.1 118 44.1
vmacro07401 Vaccinium macrocarpon HOM05D005679 ORTHO05D007228 4.6e-18 94.7 121 44.6
PSO384G2019 Papaver somniferum HOM05D005679 ORTHO05D007228 6.0e-18 94.4 115 44.3
A03p20010 Brassica napus HOM05D005679 ORTHO05D007228 1.0e-17 93.6 119 42.9
BraA03t11252Z Brassica rapa HOM05D005679 ORTHO05D007228 1.0e-17 93.6 119 42.9
Carub.0004s1806 Capsella rubella HOM05D005679 ORTHO05D007228 1.3e-17 93.2 118 44.1
Prupe.7G112900 Prunus persica HOM05D005679 ORTHO05D007228 1.3e-17 93.2 115 42.6
arahy.Tifrunner.gnm1.ann1.J82H2E Arachis hypogaea HOM05D005679 ORTHO05D007228 1.7e-17 92.8 117 41.9
CsaV3_3G037160 Cucumis sativus L. HOM05D005679 ORTHO05D007228 2.3e-17 92.4 118 40.7
AT2G36305 Arabidopsis thaliana HOM05D005679 ORTHO05D007228 3.0e-17 92.0 118 44.1
BcaB01g03852 Brassica carinata HOM05D005679 ORTHO05D007228 3.0e-17 92.0 119 42.9
AUR62028550 Chenopodium quinoa HOM05D005679 ORTHO05D007228 3.9e-17 91.7 137 40.1
MELO3C009462.2 Cucumis melo HOM05D005679 ORTHO05D007228 3.9e-17 91.7 116 40.5
arahy.Tifrunner.gnm1.ann1.5KE53F Arachis hypogaea HOM05D005679 ORTHO05D007228 5.1e-17 91.3 117 41.0
FAN14G3109 Fragaria x ananassa HOM05D005679 ORTHO05D007228 6.6e-17 90.9 115 42.6
MD12G1023600 Malus domestica HOM05D005679 ORTHO05D007228 6.6e-17 90.9 115 42.6
BcaC01g05669 Brassica carinata HOM05D005679 ORTHO05D007228 8.7e-17 90.5 119 42.0
C03p23450 Brassica napus HOM05D005679 ORTHO05D007228 8.7e-17 90.5 119 42.0
BolC3t14741H Brassica oleracea HOM05D005679 ORTHO05D007228 8.7e-17 90.5 119 42.0
ClCG10G019090 Citrullus lanatus HOM05D005679 ORTHO05D007228 8.7e-17 90.5 118 39.8
Lj5g0006681 Lotus japonicus HOM05D005679 ORTHO05D007228 1.1e-16 90.1 117 40.2
Lalb_Chr21g0315771 Lupinus albus HOM05D005679 ORTHO05D007228 1.1e-16 90.1 115 41.7
FvH4_6g18450 Fragaria vesca HOM05D005679 ORTHO05D007228 1.5e-16 89.7 115 41.7
FAN02G2684 Fragaria x ananassa HOM05D005679 ORTHO05D007228 1.5e-16 89.7 118 42.4
Thhalv10016950m.g Eutrema salsugineum HOM05D005679 ORTHO05D007228 1.9e-16 89.4 116 42.2
RcHm_v2.0_Chr3g0472981 Rosa chinensis HOM05D005679 ORTHO05D007228 2.5e-16 89.0 115 42.6
THA.LOC104807091 Tarenaya hassleriana HOM05D005679 ORTHO05D007228 2.5e-16 89.0 115 41.7
EL10Ac7g16934 Beta vulgaris HOM05D005679 ORTHO05D007228 4.3e-16 88.2 119 43.7
FAN05G0675 Fragaria x ananassa HOM05D005679 ORTHO05D007228 4.3e-16 88.2 115 42.6
AL4G32420 Arabidopsis lyrata HOM05D005679 ORTHO05D007228 5.6e-16 87.8 118 42.4
PGR004G0569 Punica granatum HOM05D005679 ORTHO05D007228 5.6e-16 87.8 118 38.1
Sp4g18530 Schrenkiella parvula HOM05D005679 ORTHO05D007228 9.6e-16 87.0 118 40.7
Sed0012745 Sechium edule HOM05D005679 ORTHO05D007228 1.6e-15 86.3 117 40.2
Nn6g34939 Nelumbo nucifera HOM05D005679 ORTHO05D007228 2.1e-15 85.9 134 39.6
Sabra06G0062900 Salix brachista HOM05D005679 ORTHO05D007228 6.2e-15 84.3 113 44.2
Ah.08g210640 Amaranthus hybridus HOM05D005679 ORTHO05D007228 1.4e-14 83.2 119 42.0
Potri.006G083300 Populus trichocarpa HOM05D005679 ORTHO05D007228 1.8e-14 82.8 115 42.6
Manes.09G056451 Manihot esculenta HOM05D005679 ORTHO05D007228 4.0e-14 81.6 93 44.1
HPP92_006355 Vanilla planifolia HOM05D005679 ORTHO05D007228 2.6e-13 79.0 119 40.3
SHI23954 Sapria himalayana HOM05D005679 ORTHO05D007228 3.4e-13 78.6 106 42.5
Lj2A135G55 Lonicera japonica HOM05D005679 ORTHO05D007228 2.9e-12 75.5 47 61.7
AUR62033502 Chenopodium quinoa HOM05D005679 ORTHO05D007228 1.9e-11 72.8 94 41.5
Lsat_1_v5_gn_1_48021 Lactuca sativa HOM05D005679 ORTHO05D007228 4.2e-11 71.6 87 48.3
Sc02g0000910 Simmondsia chinensis HOM05D005679 ORTHO05D007228 9.3e-11 70.5 108 40.7
Mapoly0066s0044 Marchantia polymorpha HOM05D005679 ORTHO05D007228 3.9e-09 65.1 120 33.3
HanXRQChr10g0313891 Helianthus annuus HOM05D005679 ORTHO05D007228 1.5e-08 63.2 48 72.9
HanXRQChr10g0314011 Helianthus annuus HOM05D005679 ORTHO05D007228 1.5e-08 63.2 56 64.3
ECA248G1272 Erigeron canadensis HOM05D005679 ORTHO05D007228 4.3e-08 61.6 50 70.0
CDE02G3258 Ceratophyllum demersum HOM05D005679 ORTHO05D007228 3.6e-07 58.5 56 53.6
TAR636G2700 Trochodendron aralioides HOM05D005679 ORTHO05D007228 3.6e-07 58.5 66 56.1
HanXRQChr10g0313971 Helianthus annuus HOM05D005679 ORTHO05D007228 4.8e-07 58.2 48 66.7
Zm00001eb285910 Zea mays HOM05D005679 ORTHO05D007228 6.2e-07 57.8 45 53.3
unitig_749.g14296 Utricularia gibba HOM05D005679 ORTHO05D007228 1.1e-06 57.0 56 57.1
SMO203G0038 Selaginella moellendorffii HOM05D005679 ORTHO05D007228 3.1e-06 55.5 87 34.5
SMO327G0022 Selaginella moellendorffii HOM05D005679 ORTHO05D007228 3.1e-06 55.5 87 34.5
ATR0568G150 Amborella trichopoda HOM05D005679 ORTHO05D007228 9.0e-06 53.9 48 58.3
QL07p039311 Quercus lobata HOM05D005679 ORTHO05D007228 9.0e-06 53.9 56 51.8


User provided reference genes

Program Settings