Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_009151 Daucus carota HOM05D005512 ORTHO05D006716 0.0e+00 1088.2 609 100.0
DCAR_020766 Daucus carota HOM05D005512 ORTHO05D006716 1.1e-65 255.4 431 47.1
Dinv31662 Davidia involucrata HOM05D005512 ORTHO05D006716 3.5e-27 127.5 342 36.5
Dinv21230 Davidia involucrata HOM05D005512 ORTHO05D006716 5.1e-26 123.6 337 35.3
Prupe.7G114400 Prunus persica HOM05D005512 ORTHO05D006716 8.7e-26 122.9 421 31.4
FAN05G5667 Fragaria x ananassa HOM05D005512 ORTHO05D006716 1.8e-23 115.2 372 31.5
FAN14G2179 Fragaria x ananassa HOM05D005512 ORTHO05D006716 4.0e-23 114.0 305 33.4
FAN02G2015 Fragaria x ananassa HOM05D005512 ORTHO05D006716 5.3e-23 113.6 312 33.0
RcHm_v2.0_Chr3g0472661 Rosa chinensis HOM05D005512 ORTHO05D006716 5.3e-23 113.6 355 33.0
QL07p039701 Quercus lobata HOM05D005512 ORTHO05D006716 6.9e-23 113.2 459 30.9
FvH4_6g18250 Fragaria vesca HOM05D005512 ORTHO05D006716 3.4e-22 110.9 305 33.1
FAN09G0635 Fragaria x ananassa HOM05D005512 ORTHO05D006716 5.8e-22 110.2 355 32.1
FAN05G0202 Fragaria x ananassa HOM05D005512 ORTHO05D006716 1.3e-21 109.0 484 28.7
Sabra06G0089500 Salix brachista HOM05D005512 ORTHO05D006716 1.7e-21 108.6 259 33.6
Thecc.05G085400 Theobroma cacao HOM05D005512 ORTHO05D006716 1.7e-21 108.6 268 32.5
MD14G1019200 Malus domestica HOM05D005512 ORTHO05D006716 4.9e-21 107.1 285 31.9
Gohir.D04G102100 Gossypium hirsutum HOM05D005512 ORTHO05D006716 6.5e-21 106.7 445 27.4
MD12G1022300 Malus domestica HOM05D005512 ORTHO05D006716 8.4e-21 106.3 354 31.1
Potri.006G114600 Populus trichocarpa HOM05D005512 ORTHO05D006716 1.1e-20 105.9 258 34.5
Cfa016575 Carpinus fangiana HOM05D005512 ORTHO05D006716 4.2e-20 104.0 515 28.5
Hma1.2p1_0084F.1_g043460 Hydrangea macrophylla HOM05D005512 ORTHO05D006716 4.2e-20 104.0 336 31.8
TAR623G0330 Trochodendron aralioides HOM05D005512 ORTHO05D006716 4.2e-20 104.0 242 37.6
Gorai.009G405400 Gossypium raimondii HOM05D005512 ORTHO05D006716 7.1e-20 103.2 445 27.0
Actinidia10388 Actinidia chinensis HOM05D005512 ORTHO05D006716 1.2e-19 102.4 285 33.0
Oeu056908.1 Olea europaea HOM05D005512 ORTHO05D006716 3.5e-19 100.9 290 32.1
Haze_19571 Corylus avellana HOM05D005512 ORTHO05D006716 4.6e-19 100.5 281 33.5
Gohir.A04G064600 Gossypium hirsutum HOM05D005512 ORTHO05D006716 4.6e-19 100.5 445 27.0
CiPaw.09G010900 Carya illinoinensis HOM05D005512 ORTHO05D006716 7.9e-19 99.8 476 29.2
Thhalv10009681m.g Eutrema salsugineum HOM05D005512 ORTHO05D006716 2.3e-18 98.2 374 29.4
Sopen09g004520 Solanum pennellii HOM05D005512 ORTHO05D006716 3.9e-18 97.4 255 33.3
FAN14G2174 Fragaria x ananassa HOM05D005512 ORTHO05D006716 5.1e-18 97.1 303 32.0
Manes.09G059527 Manihot esculenta HOM05D005512 ORTHO05D006716 5.1e-18 97.1 473 28.1
TWI53G0330 Tripterygium wilfordii HOM05D005512 ORTHO05D006716 1.5e-17 95.5 522 26.1
CANSAT80G2511 Cannabis sativa HOM05D005512 ORTHO05D006716 1.9e-17 95.1 436 28.7
CiPaw.10G007200 Carya illinoinensis HOM05D005512 ORTHO05D006716 1.9e-17 95.1 415 27.0
TWI74G0342 Tripterygium wilfordii HOM05D005512 ORTHO05D006716 1.9e-17 95.1 276 31.9
Lj1g0021236 Lotus japonicus HOM05D005512 ORTHO05D006716 3.3e-17 94.4 271 33.6
AL1G32240 Arabidopsis lyrata HOM05D005512 ORTHO05D006716 7.4e-17 93.2 430 26.0
Lsat_1_v5_gn_2_22561 Lactuca sativa HOM05D005512 ORTHO05D006716 7.4e-17 93.2 290 31.4
Rhsim03G0078100 Rhododendron simsii HOM05D005512 ORTHO05D006716 7.4e-17 93.2 370 30.0
ECA238G0726 Erigeron canadensis HOM05D000284 ORTHO05D001229 9.7e-17 92.8 263 32.7
CARHR020060 Cardamine hirsuta HOM05D005512 ORTHO05D006716 2.2e-16 91.7 437 26.5
Cpa.g.sc5.51 Carica papaya HOM05D005512 ORTHO05D006716 3.7e-16 90.9 467 27.6
Glyma.03G193300 Glycine max HOM05D005512 ORTHO05D006716 3.7e-16 90.9 201 34.8
Lj3A1000G63 Lonicera japonica HOM05D005512 ORTHO05D006716 4.8e-16 90.5 470 28.9
Actinidia08422 Actinidia chinensis HOM05D005512 ORTHO05D006716 6.3e-16 90.1 221 35.3
Lalb_Chr20g0112081 Lupinus albus HOM05D005512 ORTHO05D006716 8.2e-16 89.7 235 33.2
Sp1g17370 Schrenkiella parvula HOM05D005512 ORTHO05D006716 8.2e-16 89.7 528 25.9
Duzib093G0027 Durio zibethinus HOM05D005512 ORTHO05D006716 1.4e-15 89.0 349 27.8
Nitab4.5_0000794g0130 Nicotiana tabacum HOM05D005512 ORTHO05D006716 1.4e-15 89.0 411 29.2
Peaxi162Scf00752g00310 Petunia axillaris HOM05D005512 ORTHO05D006716 2.4e-15 88.2 408 28.7
Peaxi162Scf36127g00005 Petunia axillaris HOM05D005512 ORTHO05D006716 2.4e-15 88.2 408 28.7
CsaV3_3G037090 Cucumis sativus L. HOM05D005512 ORTHO05D006716 3.1e-15 87.8 490 26.9
HanXRQChr16g0518951 Helianthus annuus HOM05D005512 ORTHO05D006716 3.1e-15 87.8 262 34.0
MELO3C009455.2 Cucumis melo HOM05D005512 ORTHO05D006716 4.1e-15 87.4 239 36.8
COL.COLO4_29783 Corchorus olitorius HOM05D005512 ORTHO05D006716 5.3e-15 87.0 446 27.4
MSTRG.10360 Avicennia marina HOM05D005512 ORTHO05D006716 6.9e-15 86.7 302 31.1
Solyc09g009760.1 Solanum lycopersicum HOM05D005512 ORTHO05D006716 6.9e-15 86.7 287 31.0
Duzib128G1345 Durio zibethinus HOM05D005512 ORTHO05D006716 9.0e-15 86.3 327 27.5
GSVIVG01033811001 Vitis vinifera HOM05D005512 ORTHO05D006716 9.0e-15 86.3 287 31.0
Glyma.19G193400 Glycine max HOM05D005512 ORTHO05D006716 1.2e-14 85.9 463 26.1
Aa31LG7G4150 Aethionema arabicum HOM05D005512 ORTHO05D006716 2.0e-14 85.1 385 27.0
Phvul.001G188300 Phaseolus vulgaris HOM05D005512 ORTHO05D006716 3.4e-14 84.3 222 32.4
Ciclev10013541m.g Citrus clementina HOM05D005512 ORTHO05D006716 7.6e-14 83.2 434 27.6
AT1G19490 Arabidopsis thaliana HOM05D005512 ORTHO05D006716 1.3e-13 82.4 484 26.4
MBI17_g31309_MAGBIO Magnolia biondii HOM05D005512 ORTHO05D006716 1.3e-13 82.4 240 32.1
BcaB03g14441 Brassica carinata HOM05D005512 ORTHO05D006716 1.7e-13 82.0 528 24.2
Nitab4.5_0011780g0020 Nicotiana tabacum HOM05D005512 ORTHO05D006716 1.7e-13 82.0 200 34.5
Zm00001eb197160 Zea mays HOM05D005512 ORTHO05D006716 2.2e-13 81.6 111 45.9
BraA06t24676Z Brassica rapa HOM05D005512 ORTHO05D006716 2.9e-13 81.3 516 26.9
Nn6g34983 Nelumbo nucifera HOM05D005512 ORTHO05D006716 2.9e-13 81.3 425 25.6
Sed0026834 Sechium edule HOM05D005512 ORTHO05D006716 5.0e-13 80.5 282 30.9
Nitab4.5_0005756g0030 Nicotiana tabacum HOM05D005512 ORTHO05D006716 1.1e-12 79.3 193 35.2
Carub.0001s1906 Capsella rubella HOM05D005512 ORTHO05D006716 1.9e-12 78.6 507 26.0
PSO339G0823 Papaver somniferum HOM05D005512 ORTHO05D006716 2.5e-12 78.2 207 32.9
C05p17910 Brassica napus HOM05D005512 ORTHO05D006716 4.2e-12 77.4 425 25.2
PSO384G3501 Papaver somniferum HOM05D005512 ORTHO05D006716 5.5e-12 77.0 209 33.5
A06p15670 Brassica napus HOM05D005512 ORTHO05D006716 7.2e-12 76.6 515 26.0
Nn2g14077 Nelumbo nucifera HOM05D005512 ORTHO05D006716 7.2e-12 76.6 153 37.3
PGR142G2241 Punica granatum HOM05D005512 ORTHO05D006716 7.2e-12 76.6 268 30.6
AUR62028570 Chenopodium quinoa HOM05D005512 ORTHO05D006716 9.3e-12 76.3 260 30.4
Os11g0154900 Oryza sativa ssp. japonica HOM05D005512 ORTHO05D006716 1.2e-11 75.9 156 39.1
Atru.chr8.1592 Acer truncatum HOM05D005512 ORTHO05D006716 1.6e-11 75.5 226 32.3
ClCG10G019160 Citrullus lanatus HOM05D005512 ORTHO05D006716 2.1e-11 75.1 502 26.9
VMungo1383G0830 Vigna mungo HOM05D005512 ORTHO05D006716 2.1e-11 75.1 400 26.5
Aqoxy4G02826 Aquilegia oxysepala HOM05D005512 ORTHO05D006716 2.7e-11 74.7 202 32.7
AUR62033525 Chenopodium quinoa HOM05D005512 ORTHO05D006716 3.6e-11 74.3 176 35.2
THA.LOC104804992 Tarenaya hassleriana HOM05D005512 ORTHO05D006716 3.6e-11 74.3 239 31.4
Zm00001eb406920 Zea mays HOM05D005512 ORTHO05D006716 6.1e-11 73.6 86 53.5
Lsat_1_v5_gn_6_66321 Lactuca sativa HOM05D005512 ORTHO05D006716 3.0e-10 71.2 135 43.0
arahy.Tifrunner.gnm1.ann1.EPRD9B Arachis hypogaea HOM05D005512 ORTHO05D006716 5.1e-10 70.5 240 30.4
CAN.G397.46 Capsicum annuum HOM05D005512 ORTHO05D006716 6.7e-10 70.1 325 28.0
Hund14853 Selenicereus undatus HOM05D005512 ORTHO05D006716 1.1e-09 69.3 127 40.2
Sc20g0006160 Simmondsia chinensis HOM05D005512 ORTHO05D006716 2.5e-09 68.2 253 30.8
EL10Ac7g16952 Beta vulgaris HOM05D005512 ORTHO05D006716 3.3e-09 67.8 165 37.6
Cc08_g02550 Coffea canephora HOM05D005512 ORTHO05D006716 3.3e-09 67.8 144 37.5
CDE08G0293 Ceratophyllum demersum HOM05D005512 ORTHO05D006716 5.7e-09 67.0 156 32.7
CDE06G1506 Ceratophyllum demersum HOM05D000077 ORTHO05D002348 9.7e-09 66.2 107 43.0
CSS0012282 Camellia sinensis var. sinensis HOM05D005512 ORTHO05D006716 2.8e-08 64.7 292 30.1
Medtr7g104190 Medicago truncatula HOM05D005512 ORTHO05D006716 4.8e-08 63.9 308 27.9
HPP92_009043 Vanilla planifolia HOM05D005512 ORTHO05D006716 1.4e-07 62.4 98 43.9
PGSC0003DMG400028166 Solanum tuberosum HOM05D005512 ORTHO05D006716 4.1e-07 60.8 148 37.8
Sopen10g032880 Solanum pennellii HOM05D005512 ORTHO05D006716 1.2e-06 59.3 134 36.6
Solyc10g083380.2 Solanum lycopersicum HOM05D005512 ORTHO05D006716 2.6e-06 58.2 127 36.2
Lj2A133G43 Lonicera japonica HOM05D005512 ORTHO05D006716 3.4e-06 57.8 315 26.0
Pp3c17_11650 Physcomitrium patens HOM05D005512 ORTHO05D006716 3.4e-06 57.8 93 45.2
Pp3c14_6250 Physcomitrium patens HOM05D005512 ORTHO05D006716 4.5e-06 57.4 123 40.7


User provided reference genes

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