Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_009115 Daucus carota HOM05D002693 ORTHO05D008074 2.4e-81 305.4 154 100.0
DCAR_013582 Daucus carota HOM05D002693 ORTHO05D008074 1.1e-33 147.1 75 98.7
DCAR_016425 Daucus carota HOM05D002693 ORTHO05D008074 7.8e-32 141.0 78 91.0
CANSAT80G0417 Cannabis sativa HOM05D002693 ORTHO05D008074 1.6e-29 133.3 78 84.6
Dinv38484 Davidia involucrata HOM05D002693 ORTHO05D008074 2.1e-29 132.9 78 85.9
CSS0044980 Camellia sinensis var. sinensis HOM05D002693 ORTHO05D008074 3.6e-29 132.1 78 85.9
Actinidia36776 Actinidia chinensis HOM05D002693 ORTHO05D008074 8.1e-29 131.0 78 84.6
GSVIVG01007572001 Vitis vinifera HOM05D002693 ORTHO05D008074 8.1e-29 131.0 78 84.6
Nn4g22488 Nelumbo nucifera HOM05D002693 ORTHO05D008074 1.1e-28 130.6 78 83.3
PSO478G4803 Papaver somniferum HOM05D002693 ORTHO05D008074 1.1e-28 130.6 78 84.6
Eucgr.K02765 Eucalyptus grandis HOM05D002693 ORTHO05D008074 1.4e-28 130.2 78 84.6
Lsat_1_v5_gn_5_13101 Lactuca sativa HOM05D002693 ORTHO05D008074 1.4e-28 130.2 78 83.3
Potri.015G088500 Populus trichocarpa HOM05D002693 ORTHO05D008074 1.4e-28 130.2 78 83.3
Sabra15G0111400 Salix brachista HOM05D002693 ORTHO05D008074 1.4e-28 130.2 78 83.3
HanXRQChr05g0156121 Helianthus annuus HOM05D002693 ORTHO05D008074 1.8e-28 129.8 78 83.3
RcHm_v2.0_Chr7g0191481 Rosa chinensis HOM05D002693 ORTHO05D008074 1.8e-28 129.8 78 84.6
PSO017G1659 Papaver somniferum HOM05D002693 ORTHO05D008074 2.4e-28 129.4 78 83.3
ECA246G3621 Erigeron canadensis HOM05D002693 ORTHO05D008074 3.1e-28 129.0 78 82.1
MD14G1165800 Malus domestica HOM05D002693 ORTHO05D008074 3.1e-28 129.0 78 84.6
PGR044G0360 Punica granatum HOM05D002693 ORTHO05D008074 3.1e-28 129.0 78 82.1
Aqoxy3G01325 Aquilegia oxysepala HOM05D002693 ORTHO05D008074 4.0e-28 128.6 78 84.6
FAN08G3291 Fragaria x ananassa HOM05D002693 ORTHO05D008074 4.0e-28 128.6 78 83.3
Rhsim12G0171100 Rhododendron simsii HOM05D002693 ORTHO05D008074 4.0e-28 128.6 78 83.3
Cfa018903 Carpinus fangiana HOM05D002693 ORTHO05D008074 5.2e-28 128.3 78 82.1
FvH4_5g07070 Fragaria vesca HOM05D002693 ORTHO05D008074 5.2e-28 128.3 78 83.3
FAN04G2647 Fragaria x ananassa HOM05D002693 ORTHO05D008074 5.2e-28 128.3 78 83.3
FAN13G1374 Fragaria x ananassa HOM05D002693 ORTHO05D008074 5.2e-28 128.3 78 83.3
FAN18G1738 Fragaria x ananassa HOM05D002693 ORTHO05D008074 5.2e-28 128.3 78 83.3
TAR622G1430 Trochodendron aralioides HOM05D002693 ORTHO05D008074 5.2e-28 128.3 78 83.3
Prupe.5G159800 Prunus persica HOM05D002693 ORTHO05D008074 6.8e-28 127.9 78 83.3
QL10p005573 Quercus lobata HOM05D002693 ORTHO05D008074 6.8e-28 127.9 78 82.1
MSTRG.11525 Avicennia marina HOM05D002693 ORTHO05D008074 8.9e-28 127.5 78 80.8
Cc04_g10650 Coffea canephora HOM05D002693 ORTHO05D008074 8.9e-28 127.5 76 84.2
CiPaw.11G013400 Carya illinoinensis HOM05D002693 ORTHO05D008074 1.2e-27 127.1 78 80.8
Duzib205G0413 Durio zibethinus HOM05D002693 ORTHO05D008074 1.2e-27 127.1 78 80.8
Oeu053509.1 Olea europaea HOM05D002693 ORTHO05D008074 1.5e-27 126.7 78 82.1
ATR0824G037 Amborella trichopoda HOM05D002693 ORTHO05D008074 2.0e-27 126.3 78 80.8
Thecc.03G121000 Theobroma cacao HOM05D002693 ORTHO05D008074 2.0e-27 126.3 78 79.5
TWI23G0591 Tripterygium wilfordii HOM05D002693 ORTHO05D008074 2.0e-27 126.3 78 80.8
Ah.15g095420 Amaranthus hybridus HOM05D002693 ORTHO05D008074 2.6e-27 125.9 78 79.5
unitig_0.g1407 Utricularia gibba HOM05D002693 ORTHO05D008074 3.4e-27 125.6 78 78.2
EL10Ac7g18055 Beta vulgaris HOM05D002693 ORTHO05D008074 4.4e-27 125.2 78 78.2
MBI08_g18358_MAGBIO Magnolia biondii HOM05D002693 ORTHO05D008074 4.4e-27 125.2 78 76.9
SGA_v2.0_scaffold90G27784 Striga asiatica HOM05D002693 ORTHO05D008074 4.4e-27 125.2 78 79.5
COL.COLO4_04553 Corchorus olitorius HOM05D002693 ORTHO05D008074 7.6e-27 124.4 78 78.2
Manes.06G113900 Manihot esculenta HOM05D002693 ORTHO05D008074 7.6e-27 124.4 78 80.8
Gohir.A09G244700 Gossypium hirsutum HOM05D002693 ORTHO05D008074 9.9e-27 124.0 78 79.5
Gohir.D09G245600 Gossypium hirsutum HOM05D002693 ORTHO05D008074 9.9e-27 124.0 78 78.2
Gorai.006G270000 Gossypium raimondii HOM05D002693 ORTHO05D008074 9.9e-27 124.0 78 79.5
Hund18531 Selenicereus undatus HOM05D002693 ORTHO05D008074 9.9e-27 124.0 78 79.5
Peaxi162Scf00089g00838 Petunia axillaris HOM05D002693 ORTHO05D008074 1.3e-26 123.6 78 78.2
Ciclev10020897m.g Citrus clementina HOM05D002693 ORTHO05D008074 1.7e-26 123.2 76 81.6
MELO3C026235.2 Cucumis melo HOM05D002693 ORTHO05D008074 2.2e-26 122.9 78 79.5
Migut.O00226 Erythranthe guttata HOM05D002693 ORTHO05D008074 2.2e-26 122.9 78 78.2
SalBow5G1929 Salvia bowleyana HOM05D002693 ORTHO05D008074 2.2e-26 122.9 78 78.2
Solyc03g111610.3 Solanum lycopersicum HOM05D002693 ORTHO05D008074 2.9e-26 122.5 78 78.2
PGSC0003DMG400015165 Solanum tuberosum HOM05D002693 ORTHO05D008074 2.9e-26 122.5 78 78.2
AT3G48420 Arabidopsis thaliana HOM05D002693 ORTHO05D008074 4.9e-26 121.7 78 76.9
Ca_16101_v3 Cicer arietinum L. HOM05D005390 ORTHO05D007086 4.9e-26 121.7 78 78.2
Ca_30077_v3 Cicer arietinum L. HOM05D005390 ORTHO05D007086 4.9e-26 121.7 78 78.2
ClCG06G017610 Citrullus lanatus HOM05D002693 ORTHO05D008074 4.9e-26 121.7 78 78.2
Nitab4.5_0002531g0130 Nicotiana tabacum HOM05D002693 ORTHO05D008074 4.9e-26 121.7 78 76.9
Psat5g139480 Pisum sativum HOM05D005390 ORTHO05D007086 4.9e-26 121.7 78 78.2
BcaB01g00815 Brassica carinata HOM05D002693 ORTHO05D008074 6.4e-26 121.3 78 76.9
C08p23410 Brassica napus HOM05D002693 ORTHO05D008074 6.4e-26 121.3 78 76.9
BolC8t49969H Brassica oleracea HOM05D002693 ORTHO05D008074 6.4e-26 121.3 78 76.9
CsaV3_1G000830 Cucumis sativus L. HOM05D002693 ORTHO05D008074 6.4e-26 121.3 78 78.2
Sed0019566 Sechium edule HOM05D002693 ORTHO05D008074 6.4e-26 121.3 78 78.2
Sc22g0003900 Simmondsia chinensis HOM05D002693 ORTHO05D008074 6.4e-26 121.3 78 78.2
CAN.G472.45 Capsicum annuum HOM05D002693 ORTHO05D008074 8.4e-26 120.9 78 76.9
Nitab4.5_0001360g0120 Nicotiana tabacum HOM05D002693 ORTHO05D008074 8.4e-26 120.9 78 76.9
HPP92_010508 Vanilla planifolia HOM05D002693 ORTHO05D008074 8.4e-26 120.9 78 75.6
Carub.0005s1458 Capsella rubella HOM05D002693 ORTHO05D008074 1.1e-25 120.6 78 75.6
AUR62001263 Chenopodium quinoa HOM05D002693 ORTHO05D008074 1.1e-25 120.6 78 75.6
AUR62025747 Chenopodium quinoa HOM05D002693 ORTHO05D008074 1.1e-25 120.6 78 75.6
arahy.Tifrunner.gnm1.ann1.3ZI7DD Arachis hypogaea HOM05D002693 ORTHO05D008074 1.4e-25 120.2 78 76.9
BcaC01g02341 Brassica carinata HOM05D002693 ORTHO05D008074 1.4e-25 120.2 78 76.9
BcaC07g39324 Brassica carinata HOM05D002693 ORTHO05D008074 1.4e-25 120.2 78 76.9
C03p66400 Brassica napus HOM05D002693 ORTHO05D008074 1.4e-25 120.2 78 76.9
BolC3t18913H Brassica oleracea HOM05D002693 ORTHO05D008074 1.4e-25 120.2 78 76.9
BraA06t25011Z Brassica rapa HOM05D002693 ORTHO05D008074 1.4e-25 120.2 78 76.9
Sopen03g030730 Solanum pennellii HOM05D002693 ORTHO05D008074 1.4e-25 120.2 78 76.9
CDE06G2530 Ceratophyllum demersum HOM05D002693 ORTHO05D008074 1.9e-25 119.8 78 75.6
Thhalv10010540m.g Eutrema salsugineum HOM05D002693 ORTHO05D008074 1.9e-25 119.8 78 76.9
Sp5g13640 Schrenkiella parvula HOM05D002693 ORTHO05D008074 1.9e-25 119.8 78 76.9
Os03g0565200 Oryza sativa ssp. japonica HOM05D002693 ORTHO05D008074 2.4e-25 119.4 78 74.4
THA.LOC104821498 Tarenaya hassleriana HOM05D002693 ORTHO05D008074 2.4e-25 119.4 78 75.6
A06p27660 Brassica napus HOM05D002693 ORTHO05D008074 3.2e-25 119.0 78 74.4
Prupe.5G159700 Prunus persica HOM05D002693 ORTHO05D008074 3.2e-25 119.0 78 76.9
VMungo1309G0913 Vigna mungo HOM05D002693 ORTHO05D008074 3.2e-25 119.0 78 73.1
Glyma.04G191700 Glycine max HOM05D002693 ORTHO05D008074 4.2e-25 118.6 78 74.4
Glyma.06G174200 Glycine max HOM05D002693 ORTHO05D008074 4.2e-25 118.6 78 74.4
Medtr3g075230 Medicago truncatula HOM05D002693 ORTHO05D008074 4.2e-25 118.6 78 74.4
TPR.G38598 Trifolium pratense HOM05D002693 ORTHO05D008074 4.2e-25 118.6 78 74.4
Aa31LG4G16990 Aethionema arabicum HOM05D002693 ORTHO05D008074 5.4e-25 118.2 78 75.6
A06p19280 Brassica napus HOM05D002693 ORTHO05D008074 5.4e-25 118.2 78 75.6
Lalb_Chr11g0069751 Lupinus albus HOM05D002693 ORTHO05D008074 5.4e-25 118.2 78 74.4
MD06G1160600 Malus domestica HOM05D002693 ORTHO05D008074 1.2e-24 117.1 78 74.4
Lj1g0007454 Lotus japonicus HOM05D002693 ORTHO05D008074 1.6e-24 116.7 78 71.8
Phvul.009G169900 Phaseolus vulgaris HOM05D002693 ORTHO05D008074 1.6e-24 116.7 78 71.8
Zm00001eb113090 Zea mays HOM05D002693 ORTHO05D008074 2.7e-24 115.9 78 71.8
SEGI_18096 Sequoiadendron giganteum HOM05D002693 ORTHO05D008074 3.5e-24 115.5 78 71.8
Lj5A101T102 Lonicera japonica HOM05D002693 ORTHO05D008074 1.3e-23 113.6 101 62.4
BcaNung06062 Brassica carinata HOM05D002693 ORTHO05D008074 1.7e-23 113.2 82 72.0
arahy.Tifrunner.gnm1.ann1.V8X883 Arachis hypogaea HOM05D005390 ORTHO05D007086 3.3e-22 109.0 78 73.1
Haze_07289 Corylus avellana HOM05D005390 ORTHO05D007086 5.6e-22 108.2 119 53.8
SGA_v2.0_scaffold237G43872 Striga asiatica HOM05D002693 ORTHO05D008074 1.1e-20 104.0 80 65.0
SMO367G1130 Selaginella moellendorffii HOM05D002693 ORTHO05D008074 2.4e-20 102.8 78 64.1
AagrBONN_evm.TU.Sc2ySwM_362.2434 Anthoceros agrestis HOM05D002693 ORTHO05D008074 1.5e-19 100.1 78 64.1
vmacro16697 Vaccinium macrocarpon HOM05D002693 ORTHO05D008074 2.0e-19 99.8 137 46.7
Mapoly0082s0060 Marchantia polymorpha HOM05D002693 ORTHO05D008074 5.8e-19 98.2 78 64.1
CBR_g22462 Chara braunii HOM05D002693 ORTHO05D008074 2.9e-18 95.9 100 49.0
DCAR_019356 Daucus carota HOM05D002693 ORTHO05D008074 1.1e-17 94.0 96 54.2
Pp3c10_2693 Physcomitrium patens HOM05D002693 ORTHO05D008074 2.1e-16 89.7 78 61.5
TWI09G0096 Tripterygium wilfordii HOM05D002693 ORTHO05D008074 3.6e-13 79.0 50 76.0
BcaB01g00813 Brassica carinata HOM05D002693 ORTHO05D008074 4.8e-13 78.6 77 55.8
MCO01G793 Micromonas commoda HOM05D002693 ORTHO05D008074 7.6e-11 71.2 85 47.1
Cre03.g206550 Chlamydomonas reinhardtii HOM05D002693 ORTHO05D008074 2.2e-10 69.7 80 50.0
PRCOL_00005469 Prasinoderma coloniale HOM05D002693 ORTHO05D008074 4.9e-10 68.6 78 48.7
Cpa.g.sc4.47 Carica papaya HOM05D002693 ORTHO05D008074 1.1e-09 67.4 41 82.9
DCAR_006073 Daucus carota HOM05D002693 ORTHO05D035002 1.1e-09 67.4 39 87.2
DCAR_007373 Daucus carota HOM05D002693 ORTHO05D035002 1.1e-09 67.4 39 87.2
RcHm_v2.0_Chr5g0027641 Rosa chinensis HOM05D002693 ORTHO05D035002 3.2e-09 65.9 39 84.6
BcaB02g10654 Brassica carinata HOM05D002693 ORTHO05D008074 2.7e-08 62.8 41 78.0
Sabra12G0066900 Salix brachista HOM05D002693 ORTHO05D349591 5.6e-06 55.1 55 56.4


User provided reference genes

Program Settings