Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_009055 Daucus carota HOM05D005711 ORTHO05D007125 0.0e+00 2001.9 1038 100.0
Dinv24132 Davidia involucrata HOM05D005711 ORTHO05D007125 1.3e-308 1063.1 1112 54.0
Actinidia09354 Actinidia chinensis HOM05D005711 ORTHO05D007125 6.6e-300 1034.2 1093 53.0
GSVIVG01033319001 Vitis vinifera HOM05D005711 ORTHO05D007125 8.6e-300 1033.9 1106 51.1
TAR633G2044 Trochodendron aralioides HOM05D005711 ORTHO05D007125 6.4e-295 1017.7 1114 52.1
CSS0036262 Camellia sinensis var. sinensis HOM05D005711 ORTHO05D007125 2.1e-290 1002.7 1098 51.9
QL07p021385 Quercus lobata HOM05D005711 ORTHO05D007125 6.0e-277 958.0 1136 48.8
HanXRQChr13g0390691 Helianthus annuus HOM05D005711 ORTHO05D007125 1.1e-275 953.7 1109 48.9
CiPaw.09G035700 Carya illinoinensis HOM05D005711 ORTHO05D007125 9.6e-275 950.7 1099 48.0
Thecc.05G160700 Theobroma cacao HOM05D005711 ORTHO05D007125 7.6e-272 941.0 1108 48.5
Cfa016851 Carpinus fangiana HOM05D005711 ORTHO05D007125 6.4e-271 937.9 1062 49.4
Potri.006G054100 Populus trichocarpa HOM05D005711 ORTHO05D007125 1.3e-266 923.7 1104 47.9
FvH4_2g02670 Fragaria vesca HOM05D005711 ORTHO05D007125 8.1e-266 921.0 1110 46.5
FAN24G0778 Fragaria x ananassa HOM05D005711 ORTHO05D007125 1.8e-265 919.8 1107 46.5
MD05G1111300 Malus domestica HOM05D005711 ORTHO05D007125 1.8e-265 919.8 1112 46.9
Manes.09G026800 Manihot esculenta HOM05D005711 ORTHO05D007125 2.4e-265 919.5 1121 47.5
FAN15G2563 Fragaria x ananassa HOM05D005711 ORTHO05D007125 5.3e-265 918.3 1114 47.0
RcHm_v2.0_Chr7g0177161 Rosa chinensis HOM05D005711 ORTHO05D007125 9.9e-264 914.1 1114 46.9
Prupe.8G156400 Prunus persica HOM05D005711 ORTHO05D007125 3.8e-263 912.1 1114 46.7
Nn7g36123 Nelumbo nucifera HOM05D005711 ORTHO05D007125 4.9e-263 911.8 1104 47.4
Oeu018003.1 Olea europaea HOM05D005711 ORTHO05D007125 9.3e-262 907.5 1074 47.8
RcHm_v2.0_Chr6g0247071 Rosa chinensis HOM05D005711 ORTHO05D007125 9.3e-262 907.5 1109 46.6
FAN20G1206 Fragaria x ananassa HOM05D005711 ORTHO05D007125 3.0e-260 902.5 1115 46.5
MSTRG.6443 Avicennia marina HOM05D005711 ORTHO05D007125 8.7e-260 901.0 1120 45.3
Lj2C380T2 Lonicera japonica HOM05D005711 ORTHO05D007125 1.5e-259 900.2 941 54.3
Ciclev10004212m.g Citrus clementina HOM05D005711 ORTHO05D007125 6.2e-258 894.8 1105 47.7
Cc06_g17000 Coffea canephora HOM05D005711 ORTHO05D007125 2.4e-257 892.9 1098 46.4
Migut.J01777 Erythranthe guttata HOM05D005711 ORTHO05D007125 1.5e-256 890.2 1118 44.9
TWI53G1199 Tripterygium wilfordii HOM05D005711 ORTHO05D007125 7.6e-256 887.9 1121 46.1
ECA248G2859 Erigeron canadensis HOM05D005711 ORTHO05D007125 6.4e-255 884.8 1057 46.9
Gorai.002G230200 Gossypium raimondii HOM05D005711 ORTHO05D007125 2.5e-254 882.9 1109 46.3
CANSAT80G2574 Cannabis sativa HOM05D005711 ORTHO05D007125 1.8e-252 876.7 1107 45.6
Gohir.A01G196500 Gossypium hirsutum HOM05D005711 ORTHO05D007125 2.5e-251 872.8 1109 46.1
SGA_v2.0_scaffold69G23097 Striga asiatica HOM05D005711 ORTHO05D007125 5.5e-246 855.1 1132 42.8
Haze_19901 Corylus avellana HOM05D005711 ORTHO05D007125 1.2e-245 854.0 1079 46.8
BraA09t40497Z Brassica rapa HOM05D005711 ORTHO05D007125 2.8e-242 842.8 1107 43.4
THA.LOC104802271 Tarenaya hassleriana HOM05D005711 ORTHO05D007125 1.1e-241 840.9 1103 45.1
Carub.0005s2441 Capsella rubella HOM05D005711 ORTHO05D007125 1.4e-241 840.5 1106 43.8
Ca_08477_v3 Cicer arietinum L. HOM05D005711 ORTHO05D007125 5.3e-241 838.6 1130 43.2
Aqoxy7G01800 Aquilegia oxysepala HOM05D005711 ORTHO05D007125 1.5e-240 837.0 1122 44.6
AT3G57570 Arabidopsis thaliana HOM05D005711 ORTHO05D007125 1.5e-240 837.0 1101 43.5
PSO782G5466 Papaver somniferum HOM05D005711 ORTHO05D007125 1.0e-239 834.3 1112 45.1
A09p50460 Brassica napus HOM05D005711 ORTHO05D007125 1.7e-239 833.6 1109 43.4
Duzib093G0922 Durio zibethinus HOM05D005711 ORTHO05D007125 5.0e-239 832.0 1067 45.8
Lj1g0025810 Lotus japonicus HOM05D005711 ORTHO05D007125 2.5e-238 829.7 1108 44.7
C08p33160 Brassica napus HOM05D005711 ORTHO05D007125 4.2e-238 828.9 1131 42.4
AL5G39150 Arabidopsis lyrata HOM05D005711 ORTHO05D007125 5.5e-238 828.6 1104 43.2
Glyma.19G141900 Glycine max HOM05D005711 ORTHO05D007125 9.4e-238 827.8 1113 43.6
BolC8t50918H Brassica oleracea HOM05D005711 ORTHO05D007125 4.6e-237 825.5 1130 42.2
Lsat_1_v5_gn_5_162580 Lactuca sativa HOM05D005711 ORTHO05D007125 1.4e-236 823.9 1077 45.9
VMungo1383G1829 Vigna mungo HOM05D005711 ORTHO05D007125 1.1e-235 820.8 1114 43.9
Phvul.001G135900 Phaseolus vulgaris HOM05D005711 ORTHO05D007125 9.7e-235 817.8 1114 43.4
Sed0005844 Sechium edule HOM05D005711 ORTHO05D007125 9.1e-233 811.2 1115 43.4
Medtr7g092130 Medicago truncatula HOM05D005711 ORTHO05D007125 7.7e-232 808.1 1107 43.0
Sc25g0005260 Simmondsia chinensis HOM05D005711 ORTHO05D007125 1.0e-231 807.7 1045 45.6
Lalb_Chr20g0110821 Lupinus albus HOM05D005711 ORTHO05D007125 2.9e-231 806.2 1100 43.2
arahy.Tifrunner.gnm1.ann1.7A57YA Arachis hypogaea HOM05D005711 ORTHO05D007125 3.2e-230 802.7 1109 42.8
PGR004G1983 Punica granatum HOM05D005711 ORTHO05D007125 4.2e-230 802.4 1025 46.5
arahy.Tifrunner.gnm1.ann1.FZG2LY Arachis hypogaea HOM05D005711 ORTHO05D007125 7.2e-230 801.6 1114 42.9
TPR.G3825 Trifolium pratense HOM05D005711 ORTHO05D007125 4.4e-227 792.3 1050 44.4
Psat3g071760 Pisum sativum HOM05D005711 ORTHO05D007125 9.7e-227 791.2 1107 42.4
AUR62026001 Chenopodium quinoa HOM05D005711 ORTHO05D007125 8.2e-226 788.1 1107 43.5
CsaV3_4G031330 Cucumis sativus L. HOM05D005711 ORTHO05D007125 1.1e-225 787.7 1112 42.0
Rhsim03G0016500 Rhododendron simsii HOM05D005711 ORTHO05D007125 6.5e-223 778.5 956 48.1
Peaxi162Scf00650g00112 Petunia axillaris HOM05D005711 ORTHO05D007125 5.2e-220 768.8 1063 43.8
Aa31LG10G12390 Aethionema arabicum HOM05D005711 ORTHO05D007125 6.7e-220 768.5 1111 42.2
Ah.13g076290 Amaranthus hybridus HOM05D005711 ORTHO05D007125 4.5e-216 755.7 1148 40.9
Gohir.D01G186800 Gossypium hirsutum HOM05D005711 ORTHO05D007125 1.4e-212 744.2 901 46.8
EL10Ac3g07027 Beta vulgaris HOM05D005711 ORTHO05D007125 1.2e-211 741.1 1113 41.2
SalBow6G5243 Salvia bowleyana HOM05D005711 ORTHO05D007125 1.8e-209 733.8 1108 40.8
MELO3C009042.2 Cucumis melo HOM05D005711 ORTHO05D007125 5.9e-208 728.8 1138 39.6
CDE10G0401 Ceratophyllum demersum HOM05D005711 ORTHO05D007125 2.1e-205 720.3 1124 40.5
Cpa.g.sc92.19 Carica papaya HOM05D005711 ORTHO05D007125 4.0e-204 716.1 822 48.3
ATR0605G192 Amborella trichopoda HOM05D005711 ORTHO05D007125 1.2e-203 714.5 1140 38.4
COL.COLO4_28164 Corchorus olitorius HOM05D005711 ORTHO05D007125 1.2e-203 714.5 975 44.4
Sp5g05020 Schrenkiella parvula HOM05D005711 ORTHO05D007125 1.8e-201 707.2 972 42.7
Thhalv10005777m.g Eutrema salsugineum HOM05D005711 ORTHO05D007125 1.5e-195 687.6 922 43.3
FAN27G3244 Fragaria x ananassa HOM05D005711 ORTHO05D007125 1.3e-191 674.5 884 43.2
BcaC07g40362 Brassica carinata HOM05D005711 ORTHO05D007125 6.8e-180 635.6 983 38.7
Nitab4.5_0002510g0050 Nicotiana tabacum HOM05D005711 ORTHO05D007125 1.3e-175 621.3 1024 38.9
Atru.chr1.1044 Acer truncatum HOM05D005711 ORTHO05D007125 6.2e-173 612.5 760 46.3
Eucgr.A02387 Eucalyptus grandis HOM05D005711 ORTHO05D007125 1.7e-162 577.8 753 44.2
vmacro22370 Vaccinium macrocarpon HOM05D005711 ORTHO05D007125 3.9e-151 540.0 684 46.6
Rhsim03G0017400 Rhododendron simsii HOM05D005711 ORTHO05D007125 3.3e-150 537.0 879 39.8
AUR62024408 Chenopodium quinoa HOM05D005711 ORTHO05D007125 7.9e-144 515.8 735 41.6
CARHR167800 Cardamine hirsuta HOM05D005711 ORTHO05D007125 4.3e-142 510.0 760 39.7
FvH4_7g07942 Fragaria vesca HOM05D005711 ORTHO05D007125 5.1e-135 486.5 623 44.0
Pp3c13_4080 Physcomitrium patens HOM05D005711 ORTHO05D007125 4.6e-128 463.4 1148 30.2
Mapoly0169s0013 Marchantia polymorpha HOM05D005711 ORTHO05D007125 5.1e-119 433.3 1342 25.9
Rhsim03G0016100 Rhododendron simsii HOM05D005711 ORTHO05D007125 7.2e-113 412.9 469 50.7
ClCG04G000840 Citrullus lanatus HOM05D005711 ORTHO05D007125 9.1e-108 396.0 422 50.2
Rhsim05G0135200 Rhododendron simsii HOM05D005711 ORTHO05D007125 3.3e-102 377.5 1068 32.1
ClCG04G000850 Citrullus lanatus HOM05D005711 ORTHO05D007125 1.7e-93 348.6 689 34.0
CARHR167810 Cardamine hirsuta HOM05D005711 ORTHO05D007125 1.9e-89 335.1 361 51.5
vmacro07878 Vaccinium macrocarpon HOM05D005711 ORTHO05D007125 3.6e-88 330.9 339 53.4
Nitab4.5_0005201g0010 Nicotiana tabacum HOM05D005711 ORTHO05D007125 5.9e-83 313.5 297 56.6
Solyc03g063700.1 Solanum lycopersicum HOM05D005711 ORTHO05D007125 6.8e-79 300.1 299 54.2
PGSC0003DMG402011958 Solanum tuberosum HOM05D005711 ORTHO05D007125 1.2e-78 299.3 291 55.0
Dinv01671 Davidia involucrata HOM05D005711 ORTHO05D007125 1.3e-77 295.8 279 55.9
FAN01G1916 Fragaria x ananassa HOM05D005711 ORTHO05D007125 2.9e-77 294.7 393 44.5
vmacro07877 Vaccinium macrocarpon HOM05D005711 ORTHO05D007125 1.2e-72 279.3 343 45.8
Rhsim03G0014800 Rhododendron simsii HOM05D005711 ORTHO05D007125 4.7e-64 250.8 587 32.7
Thecc.05G160900 Theobroma cacao HOM05D005711 ORTHO05D007125 6.8e-63 246.9 327 42.2
Sabra06G0038400 Salix brachista HOM05D005711 ORTHO05D007125 2.3e-55 221.9 230 53.9
Lj2A380T68 Lonicera japonica HOM05D005711 ORTHO05D007125 1.5e-49 202.6 189 58.2
AUR62024409 Chenopodium quinoa HOM05D005711 ORTHO05D007125 3.3e-49 201.4 368 38.0
SEGI_00323 Sequoiadendron giganteum HOM05D005711 ORTHO05D007125 5.2e-47 194.1 252 43.7
Nitab4.5_0010669g0020 Nicotiana tabacum HOM05D005711 ORTHO05D007125 4.9e-45 187.6 438 33.6
Hma1.2p1_0247F.1_g101860 Hydrangea macrophylla HOM05D005711 ORTHO05D007125 5.8e-38 164.1 162 52.5
Cpa.g.sc92.20 Carica papaya HOM05D005711 ORTHO05D010193 1.4e-36 159.5 172 47.1
SMO356G0176 Selaginella moellendorffii HOM05D005711 ORTHO05D007125 9.3e-36 156.8 313 32.6
BcaC07g40361 Brassica carinata HOM05D005711 ORTHO05D007125 6.0e-35 154.1 141 56.0
COL.COLO4_28165 Corchorus olitorius HOM05D005711 ORTHO05D007125 4.8e-32 144.4 152 53.3
Rhsim03G0097300 Rhododendron simsii HOM05D005711 ORTHO05D007125 1.3e-29 136.3 386 30.8
CBR_g41427 Chara braunii HOM05D005711 ORTHO05D007125 7.1e-28 130.6 458 24.7
PGSC0003DMG401011958 Solanum tuberosum HOM05D005711 ORTHO05D007125 1.6e-27 129.4 199 42.2
SEGI_36353 Sequoiadendron giganteum HOM05D005711 ORTHO05D007125 8.7e-26 123.6 255 33.3
SalBow4G0785 Salvia bowleyana HOM05D005711 ORTHO05D007125 2.6e-22 112.1 136 46.3
FvH4_7g07941 Fragaria vesca HOM05D005711 ORTHO05D007125 4.9e-21 107.8 135 51.1
FvH4_7g07943 Fragaria vesca HOM05D005711 ORTHO05D007125 5.3e-15 87.8 121 38.8
FAN10G0844 Fragaria x ananassa HOM05D005711 ORTHO05D007125 5.3e-15 87.8 121 38.8
Rhsim03G0016400 Rhododendron simsii HOM05D005711 ORTHO05D007125 6.9e-15 87.4 79 58.2
FAN06G4049 Fragaria x ananassa HOM05D005711 ORTHO05D007125 2.6e-14 85.5 121 38.0
Hma1.2p1_0247F.1_g101870 Hydrangea macrophylla HOM05D005711 ORTHO05D007125 6.1e-11 74.3 99 46.5
Nitab4.5_0010669g0030 Nicotiana tabacum HOM05D005711 ORTHO05D007125 1.3e-10 73.2 161 33.5
FAN26G1840 Fragaria x ananassa HOM05D005711 ORTHO05D007125 3.9e-10 71.6 95 44.2
MCO09G818 Micromonas commoda HOM05D005711 ORTHO05D007125 3.3e-09 68.6 200 28.0
BolC4t25036H Brassica oleracea HOM05D005711 ORTHO05D040726 1.4e-07 63.2 121 38.0
Lsat_1_v5_gn_7_104380 Lactuca sativa HOM05D005711 ORTHO05D007125 7.7e-06 57.4 109 41.3


User provided reference genes

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